Click here to switch to the map view.

The map label for this gene is 161508649

Identifier: 161508649

GI number: 161508649

Start: 426058

End: 426441

Strand: Reverse

Name: 161508649

Synonym: USA300HOU_0400

Alternate gene names: NA

Gene position: 426441-426058 (Counterclockwise)

Preceding gene: 161508650

Following gene: 161508647

Centisome position: 14.84

GC content: 31.51

Gene sequence:

>384_bases
ATGAAAGTTCGAATTACTTTTATTATTTTAGCAATTTTATCGACGATTGTTTGCTTGTTCTTAGCAGCAATGCATCCAAC
AGGACCAAACACAGTAACTTTTGAACAGCCATATTTATTCACCCTCAACATCATTATAATGGTATTAGTCGCATTACCTT
CACTTGTTTTAGCTATATATGATTATATGAGTTTTAGAATTTCTTCTGCTATTTTACAATTTCTAGGGGCTATCTCTTGG
TTCTTTTTATCATTGATATTATCGCTCACACAATTTACACCTTTTACATTAGCGTCATTTATAACTTCAATTATTTTGTT
CACAAGCACAATTATCACATTAGCCATTGGTGGTAAGTCTGTTGAAAAGAATGATTCCCCTTAA

Upstream 100 bases:

>100_bases
ATTCTCTATCTATGCCAAAATTCCCATTAGTTGACGCATTTGACTATATACCTAACATATTCCATACTTATATTGACTCT
ATAAACAAAGGATGATCATG

Downstream 100 bases:

>100_bases
ATTCCAAATGAAAAAAAGGTTCTGAAGGCCGCTATAAAACACAGTTTTTCAGAACCTCTATACTTCTATTCAATGATATA
TGGTTTGCAATTTTCTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNIIIMVLVALPSLVLAIYDYMSFRISSAILQFLGAISW
FFLSLILSLTQFTPFTLASFITSIILFTSTIITLAIGGKSVEKNDSP

Sequences:

>Translated_127_residues
MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNIIIMVLVALPSLVLAIYDYMSFRISSAILQFLGAISW
FFLSLILSLTQFTPFTLASFITSIILFTSTIITLAIGGKSVEKNDSP
>Mature_127_residues
MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNIIIMVLVALPSLVLAIYDYMSFRISSAILQFLGAISW
FFLSLILSLTQFTPFTLASFITSIILFTSTIITLAIGGKSVEKNDSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14028; Mature: 14028

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNIIIMVLVALPSLVLAIY
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
DYMSFRISSAILQFLGAISWFFLSLILSLTQFTPFTLASFITSIILFTSTIITLAIGGKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
VEKNDSP
CCCCCCC
>Mature Secondary Structure
MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNIIIMVLVALPSLVLAIY
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
DYMSFRISSAILQFLGAISWFFLSLILSLTQFTPFTLASFITSIILFTSTIITLAIGGKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
VEKNDSP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA