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The map label for this gene is sle1 [H]

Identifier: 161508547

GI number: 161508547

Start: 329275

End: 330177

Strand: Reverse

Name: sle1 [H]

Synonym: USA300HOU_0296

Alternate gene names: 161508547

Gene position: 330177-329275 (Counterclockwise)

Preceding gene: 161508574

Following gene: 161508544

Centisome position: 11.49

GC content: 37.32

Gene sequence:

>903_bases
ATGGTTATTATGAAGAAAACAATTTTACTGACGATGACAACTCTTACTTTATTTAGTATGTCGCCTAACTCGGCTCAAGC
ATATACGAATGATAGCAAAACATTAGAAGAAGCAAAGAAAGCACACCCAAACGCACAGTTCAAAGTGAATAAAGACACCG
GCGCGTATACTTATACATATGACAAAAACAACACGCCAAACAACAATCATCAAAACCAGTCACGTACAAACGACAATCAT
CAACACGCAAATCAACGTGATCTTAACAACAATCAGTACCATTCTTCATTAAGTGGTCAGTATACGCACATTAATGACGC
AATTGATTCACACACACCGCCTCAAACGTCACCAAGCAATCCTTTGACACCAGCAATACCGAATGTCGAAGACAATGACG
ATGAATTAAATAACGCTTTTTCAAAAGATAACAAAGGGCTTATTACAGGCATCGATTTAGACGAATTGTATGACGAATTA
CAAATCGCCGAATTTAATGACAAAGCAAAGACCGCTGACGGTAAACCTTTAGCATTAGGTAACGGTAAAATCATTGATCA
GCCTCTTATCACAAGTAAGAACAACTTATATACTGCTGGACAATGTACATGGTATGTCTTTGATAAACGTGCCAAAGATG
GACACACGATTAGTACATTTTGGGGAGATGCTAAAAACTGGGCAGGCCAAGCTTCAAGCAATGGCTTCAAAGTAGATAGA
CACCCAACACGAGGATCAATTTTACAAACAGTAAATGGTCCATTTGGTCATGTAGCCTACGTTGAAAAAGTTAATATTGA
TGGAAGTATTCTAATTTCAGAAATGAACTGGATTGGTGAATATATCGTTTCATCAAGAACCATCTCTGCTTCAGAAGTTT
CATCATATAATTACATCCATTAA

Upstream 100 bases:

>100_bases
AAATAAATATATTGAATATACCCATATATTTTTAATTAACCATTCATTTTTGTAATATAAATGTGTATACTAAAATTAAA
TTAAATACATAAAGGATTAA

Downstream 100 bases:

>100_bases
ATTAATCATGACATCAATAAAAAGCGACCAGTTCGCAGTTTACAATTCGTAACACTGCAAAATTGGTCGCTTTATTTTGT
ATGTTATTCGATTATAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MVIMKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNAQFKVNKDTGAYTYTYDKNNTPNNNHQNQSRTNDNH
QHANQRDLNNNQYHSSLSGQYTHINDAIDSHTPPQTSPSNPLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDEL
QIAEFNDKAKTADGKPLALGNGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDR
HPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIGEYIVSSRTISASEVSSYNYIH

Sequences:

>Translated_300_residues
MVIMKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNAQFKVNKDTGAYTYTYDKNNTPNNNHQNQSRTNDNH
QHANQRDLNNNQYHSSLSGQYTHINDAIDSHTPPQTSPSNPLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDEL
QIAEFNDKAKTADGKPLALGNGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDR
HPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIGEYIVSSRTISASEVSSYNYIH
>Mature_300_residues
MVIMKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNAQFKVNKDTGAYTYTYDKNNTPNNNHQNQSRTNDNH
QHANQRDLNNNQYHSSLSGQYTHINDAIDSHTPPQTSPSNPLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDEL
QIAEFNDKAKTADGKPLALGNGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDR
HPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIGEYIVSSRTISASEVSSYNYIH

Specific function: Peptidoglycan hydrolase involved in the splitting of the septum during cell division [H]

COG id: COG3942

COG function: function code R; Surface antigen

Gene ontology:

Cell location: Secreted. Cell surface (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase C51 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007921
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF05257 CHAP; PF01476 LysM [H]

EC number: =3.5.1.28 [H]

Molecular weight: Translated: 33376; Mature: 33376

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS50911 CHAP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIMKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNAQFKVNKDTGAYTYTY
CEEEEHHHHHEEEEHHEEECCCCCCCEECCCHHHHHHHHHHCCCCEEEEECCCCCEEEEE
DKNNTPNNNHQNQSRTNDNHQHANQRDLNNNQYHSSLSGQYTHINDAIDSHTPPQTSPSN
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCCCCEEEECHHHHCCCCCCCCCCC
PLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDELQIAEFNDKAKTADGKPLALG
CCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHEEEECCCCCCCCCCCEEEEC
NGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDR
CCEEECCCCCCCCCCEEECCCEEEEEEECCCCCCCEEEEEECCCHHCCCCCCCCCEEECC
HPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIGEYIVSSRTISASEVSSYNYIH
CCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MVIMKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNAQFKVNKDTGAYTYTY
CEEEEHHHHHEEEEHHEEECCCCCCCEECCCHHHHHHHHHHCCCCEEEEECCCCCEEEEE
DKNNTPNNNHQNQSRTNDNHQHANQRDLNNNQYHSSLSGQYTHINDAIDSHTPPQTSPSN
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCCCCEEEECHHHHCCCCCCCCCCC
PLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDELQIAEFNDKAKTADGKPLALG
CCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHEEEECCCCCCCCCCCEEEEC
NGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDR
CCEEECCCCCCCCCCEEECCCEEEEEEECCCCCCCEEEEEECCCHHCCCCCCCCCEEECC
HPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIGEYIVSSRTISASEVSSYNYIH
CCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA