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The map label for this gene is 161508306

Identifier: 161508306

GI number: 161508306

Start: 49125

End: 50912

Strand: Reverse

Name: 161508306

Synonym: USA300HOU_0041

Alternate gene names: NA

Gene position: 50912-49125 (Counterclockwise)

Preceding gene: 161508307

Following gene: 161508305

Centisome position: 1.77

GC content: 34.51

Gene sequence:

>1788_bases
ATGAGTTACACATTGTTTGAAATTGGCCCATTTGCTTTAGATTCCTTCGGTTGGAAAGAAACGATACCACCTAAAAAAGA
TGGTGACAGTGAAAAAGTGGTTAGAATGGCTAGCCCTATTATTGTTAATGCAAGATTTTCTGATCCAATTACTGGTGTTG
AAAAGTTGATTATTACTAACAACAATGGTAAAAAAGACATTTTTGAGTCTGATATCTTAACAACACGAAACTTACCTTCT
TTAATTAAATATGGCTACAGTATTAACGAGAAGTATATTAGATCATTGAGTTATGCCTTGCAATTGATGCGAGATAGATT
ACCACTTTCTGAATTATATGAGGGTGTAGGTATACTAGAGACACCTTTTGGCTACTTGATATCGCTAGATAAAGTTCTCA
AATCTATTCAATTTAATCAGTCCTCACCTTCATACCCTATTGTAGATAGTGCTTATGACTTAACTCCTAAAGGTACATTT
GATAATTGGTTTAACATGTATATTGACGAGGTTAAAGGTCATCTTCTTTTAGAATTGGCAGTCATATTTGGGATTTCTGC
CTTAGTGACAAGTTTTCTGAAGCATAAACATGAAATCGAATTTGCAGGAATTCTCTTTAGTTTTACAGGTCAATCCTCAA
CCGGTAAGTCAACCGCAGCTGCTTTAGCTGTATCAGTCGCTGGTAACCCTACCAAAGGTAATGAAACTCTTTTTAGAAGT
TGGAATGCCACACGAAACGCACTTGAAGGTTATTTGAGTAACAATTATGGCATTCCTATAGTATTTGATGAGCTTTCATC
TACGACACTTAGAGATACCACGGGTTTGTTATATTCCATCGCTGAAGGTCAAGGTCGTCAACGTTCAAACGTTCATGGAG
AAGTTAAAACGCCTAAGAATTGGGGTACTTCTGTCATTTCAACGTCAGAATACAGTATTTTTAATGATTCAGCTCAAAAC
GATGGATTACGTGTAAGAACCATCGAGATTAATGAACAATTCACTACAAATGCGACCAATGCTGACAATATTAAAAAAGC
TGTAGCACTAAACTATGGTCATGTTTTACCGTTAGTAGCTAAATATCTTATAAATCGTGAAGATGAAGTTATTCAATGGT
TTTACAAGGAAGTAGATTGGTTTGAAGCTAAATTGAAAGATGAAACAAACAATACAGGTATTCGTATGTTTAAGCGTTAT
GCAGTCATTACAACATCTGCGAAAATATTAGGTCGTGTTTTATCTACAGATATTGATATCGCTAATATAAGAGACTACTT
TATTGATTATCATACTCATACAGTCTCTGAACGCTCATTAGCTGATAAAGCTATTGATGTCATCATTCAATTTGTGGCAC
AAAACAGAGGTAAGTTTTCAGATGAAGGTGCTTTGAAAAATATGTTTGAGAACTATGGATTAATCTCATTAAAAGATGAC
CATATCGAAGTAAAAATAATTGCGAACGTTTTTAAACAGATGCTAAACAATCATCAATTTCAAGATGTTAATAATGTTGT
CAACGCCTTAAGAGATAAAGGTTTCATATTAGCTGACCGTGGACGCCAAACAACTAAAAGAAGTGTCAAAGATAATAGCG
GTAAAAAACAATCACTTGTATTTTACCATCTAAAATTAGATGTAGAGTTTGCATCTATCCTCGGATTAACTAAAGATAAG
TCGTTACTTCAAAATTGGACACCGTCAAATGATAACAAAGCTGCGAAAGAACTTTTTAAATCCGCTAATGAAGGGATAGG
CCCTTCAGGAGTTCACGAAGATTTCTAA

Upstream 100 bases:

>100_bases
CATTTAAAATTGTAGGAACAAAAAATGGCAGTTTATTATATCAGAAAATAGGGATAAACCCATGCAATAATAGCACGCCT
TCGAAAGGAGGTGATTGCTA

Downstream 100 bases:

>100_bases
TTGTCTTTATCATACAACTGTGAAGCATCAAACTGAATAATCGACGTATTGAAGATAGAACAAATAACGGAGTGAAAAAC
ATGGATGAACTTATCGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Superfamily II Helicase; Inner Membrane; Inner Membrane Protein Phage Origin

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPS
LIKYGYSINEKYIRSLSYALQLMRDRLPLSELYEGVGILETPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTF
DNWFNMYIDEVKGHLLLELAVIFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRS
WNATRNALEGYLSNNYGIPIVFDELSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQN
DGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDETNNTGIRMFKRY
AVITTSAKILGRVLSTDIDIANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDD
HIEVKIIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDK
SLLQNWTPSNDNKAAKELFKSANEGIGPSGVHEDF

Sequences:

>Translated_595_residues
MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPS
LIKYGYSINEKYIRSLSYALQLMRDRLPLSELYEGVGILETPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTF
DNWFNMYIDEVKGHLLLELAVIFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRS
WNATRNALEGYLSNNYGIPIVFDELSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQN
DGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDETNNTGIRMFKRY
AVITTSAKILGRVLSTDIDIANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDD
HIEVKIIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDK
SLLQNWTPSNDNKAAKELFKSANEGIGPSGVHEDF
>Mature_594_residues
SYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPSL
IKYGYSINEKYIRSLSYALQLMRDRLPLSELYEGVGILETPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTFD
NWFNMYIDEVKGHLLLELAVIFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRSW
NATRNALEGYLSNNYGIPIVFDELSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQND
GLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDETNNTGIRMFKRYA
VITTSAKILGRVLSTDIDIANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDDH
IEVKIIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDKS
LLQNWTPSNDNKAAKELFKSANEGIGPSGVHEDF

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66837; Mature: 66706

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITN
CCEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEC
NNGKKDIFESDILTTRNLPSLIKYGYSINEKYIRSLSYALQLMRDRLPLSELYEGVGILE
CCCCCCHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEE
TPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTFDNWFNMYIDEVKGHLLLELA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRS
HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCHHHHHC
WNATRNALEGYLSNNYGIPIVFDELSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKN
CHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHEEECCCCCCCCCCCCCEECCCCC
WGTSVISTSEYSIFNDSAQNDGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVA
CCCCEEECCCCEEECCCCCCCCEEEEEEEECCCEECCCCCHHHHHHHHHHCCCHHHHHHH
KYLINREDEVIQWFYKEVDWFEAKLKDETNNTGIRMFKRYAVITTSAKILGRVLSTDIDI
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHCCCCH
ANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECC
HIEVKIIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGKKQSLV
CEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCEEE
FYHLKLDVEFASILGLTKDKSLLQNWTPSNDNKAAKELFKSANEGIGPSGVHEDF
EEEEEEEEEHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITN
CEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEC
NNGKKDIFESDILTTRNLPSLIKYGYSINEKYIRSLSYALQLMRDRLPLSELYEGVGILE
CCCCCCHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEE
TPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTFDNWFNMYIDEVKGHLLLELA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRS
HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCHHHHHC
WNATRNALEGYLSNNYGIPIVFDELSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKN
CHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHEEECCCCCCCCCCCCCEECCCCC
WGTSVISTSEYSIFNDSAQNDGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVA
CCCCEEECCCCEEECCCCCCCCEEEEEEEECCCEECCCCCHHHHHHHHHHCCCHHHHHHH
KYLINREDEVIQWFYKEVDWFEAKLKDETNNTGIRMFKRYAVITTSAKILGRVLSTDIDI
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHCCCCH
ANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECC
HIEVKIIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGKKQSLV
CEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCEEE
FYHLKLDVEFASILGLTKDKSLLQNWTPSNDNKAAKELFKSANEGIGPSGVHEDF
EEEEEEEEEHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA