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The map label for this gene is 161508299

Identifier: 161508299

GI number: 161508299

Start: 42442

End: 43965

Strand: Reverse

Name: 161508299

Synonym: USA300HOU_0034

Alternate gene names: NA

Gene position: 43965-42442 (Counterclockwise)

Preceding gene: 161508300

Following gene: 161508296

Centisome position: 1.53

GC content: 28.28

Gene sequence:

>1524_bases
ATGATGTTAAAAGTGATTCTATATGCCTACACACAATCTGTATTCTCAGGTCGTAAAATAGAAAAAATGCTTAATGATAG
CATCCGAATGATGTGGCTATCACAAAATCAAAAACCTTCTTATAAAACAATTAATCAATTTAGAGTAAATCCAAAAGTAG
ATGCTTTATTAGAATCTTTATTTATTCAATTTTACAGTCAGTGTGTAAAACAAAATCTTATAGATGATAAAGCTATTTTT
ATTGATGGTACAAAAATTGAAGCAAATGCCAATCGATATACATTTGTATGGAAAAAGAGTATTCAAAACCATGAATCAAA
GATGAATGAGGATTCTAAAGCCCTCTACCATGAATTGGTAACCAATAAAATCATACCGGAAATTAAAGAAGATCATGATA
ATGAATTAACAAAAGAAGAAATAGATTTGATTGGTAGTCACTTAGATAAAGAAATCGAAGATTTAAACCAACATATCAAC
AATGAAAAATGTACTAAAACAAGAAAACAAATACGTCTCAAAAGAACTAAAATCAAAAAATACAAAAAGCAAATCAATGA
TTATTTTGAGCGAAAGTATCGATACGAATTTCAAAAATCTATTTTAAAGGATAGAAATAGTTATTCTAAGACAGATTATG
ATGCGACATTTATGAGAATGAAAGAAGATCACATGAAAAATGGACAACTTAAGCCAGGGTATAATTTACAAATAGCAACA
AATTCCCAATTTGTTTTATCTTATAATGTGTATCAAAATCCAACGGATACTAGAACGATGATTCCATTTTTAAATTCAAT
TCAAGAGACCTACGGTCATTTACCTGAATATATTGTAGCTGATGCAGGTTATGGTAGTGAATCAAATTATAAGGCAATTA
TAGATGACTTTAATCGAACGCCACTCATAACATATGGAATGTTTATAAAAGATAAAACTAAAAAATATAAAAGTGACATC
TTTAATACTCAAAATTGGAACTATGACGAAATTAATGACGAATTCATTTGTCCGAATAATAAACGGCTAGGTTTTAAAAG
ATATGCCTATCGTCATGATAAGTATGGTTATAAGCGAGACTTCAAATTATATGAATGTGATGATTGTTCAGAATGTCCTC
TGAAAAATCAATGTATGAACTTCAATTCAAAAACAAACAAAAAAATAATGAAGAATTATAACTGGGAATATTTTAAATCC
CAAATTAACAAAAAGCTTTCAGAACCAGAAACAAAAAATATCTACAGTCAAAGAAAAATTGATGTGGAACCTGTTTTTGG
ATTTATGAAGGCTATTTTGGGTTTCACTCGGATGTCTGTCCGAGGACTCAATAAAGTCAAAAGAGAACTTGGTTTTGTAT
TAATGGCACTTAATATAAGAAAAGTAGTAGCTCAACGAGCTGAAAATAATCAAAAAATTTATAAAAAAGACAATTTCTAT
ATTATTTCAATAGAAATTGTCTTTTTTCACTTATCCAAGAACTTTATGTCCCGGACTCATTATGATTTATTTTTTTATTG
CTGA

Upstream 100 bases:

>100_bases
TCAACATCGTTTTACTGTAAATGATATTGTTGAAACAATTCCTGACAATGAATTCGACGAATTCAGACATCACCGTGGTG
CAACTTCGTACCATCCTAAA

Downstream 100 bases:

>100_bases
CTTGCCATTAATTCTGCTTGCTCTACAACTTGTTCCACAGCCATTTTTTGAAGATCTGGTGGATAGCCATATTTCTTTAA
TAGGCGTCTAACTTGAACTC

Product: IS1272 transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase Is4 Family Protein; IS4 Family Transposase; Transposase IS4 Family; LOW QUALITY PROTEIN Transposase; ISNCY Family Transposase; ISCpe5 Transposase; ISBma2 Transposase; ISCps6 Transposase; ISPpu20 Transposase; LOW QUALITY PROTEIN ISNCY Family Transposase; Transposase Is4 Family; Transposase ISNCY Family Protein

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MMLKVILYAYTQSVFSGRKIEKMLNDSIRMMWLSQNQKPSYKTINQFRVNPKVDALLESLFIQFYSQCVKQNLIDDKAIF
IDGTKIEANANRYTFVWKKSIQNHESKMNEDSKALYHELVTNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHIN
NEKCTKTRKQIRLKRTKIKKYKKQINDYFERKYRYEFQKSILKDRNSYSKTDYDATFMRMKEDHMKNGQLKPGYNLQIAT
NSQFVLSYNVYQNPTDTRTMIPFLNSIQETYGHLPEYIVADAGYGSESNYKAIIDDFNRTPLITYGMFIKDKTKKYKSDI
FNTQNWNYDEINDEFICPNNKRLGFKRYAYRHDKYGYKRDFKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKS
QINKKLSEPETKNIYSQRKIDVEPVFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKIYKKDNFY
IISIEIVFFHLSKNFMSRTHYDLFFYC

Sequences:

>Translated_507_residues
MMLKVILYAYTQSVFSGRKIEKMLNDSIRMMWLSQNQKPSYKTINQFRVNPKVDALLESLFIQFYSQCVKQNLIDDKAIF
IDGTKIEANANRYTFVWKKSIQNHESKMNEDSKALYHELVTNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHIN
NEKCTKTRKQIRLKRTKIKKYKKQINDYFERKYRYEFQKSILKDRNSYSKTDYDATFMRMKEDHMKNGQLKPGYNLQIAT
NSQFVLSYNVYQNPTDTRTMIPFLNSIQETYGHLPEYIVADAGYGSESNYKAIIDDFNRTPLITYGMFIKDKTKKYKSDI
FNTQNWNYDEINDEFICPNNKRLGFKRYAYRHDKYGYKRDFKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKS
QINKKLSEPETKNIYSQRKIDVEPVFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKIYKKDNFY
IISIEIVFFHLSKNFMSRTHYDLFFYC
>Mature_507_residues
MMLKVILYAYTQSVFSGRKIEKMLNDSIRMMWLSQNQKPSYKTINQFRVNPKVDALLESLFIQFYSQCVKQNLIDDKAIF
IDGTKIEANANRYTFVWKKSIQNHESKMNEDSKALYHELVTNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHIN
NEKCTKTRKQIRLKRTKIKKYKKQINDYFERKYRYEFQKSILKDRNSYSKTDYDATFMRMKEDHMKNGQLKPGYNLQIAT
NSQFVLSYNVYQNPTDTRTMIPFLNSIQETYGHLPEYIVADAGYGSESNYKAIIDDFNRTPLITYGMFIKDKTKKYKSDI
FNTQNWNYDEINDEFICPNNKRLGFKRYAYRHDKYGYKRDFKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKS
QINKKLSEPETKNIYSQRKIDVEPVFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKIYKKDNFY
IISIEIVFFHLSKNFMSRTHYDLFFYC

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60734; Mature: 60734

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLKVILYAYTQSVFSGRKIEKMLNDSIRMMWLSQNQKPSYKTINQFRVNPKVDALLESL
CHHHHHHHHHHHHHHCCHHHHHHHCCHHEEEEECCCCCCCHHHHHHEECCCHHHHHHHHH
FIQFYSQCVKQNLIDDKAIFIDGTKIEANANRYTFVWKKSIQNHESKMNEDSKALYHELV
HHHHHHHHHHHHCCCCCEEEEECCEEEECCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHH
TNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHINNEKCTKTRKQIRLKRTKIKK
HHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YKKQINDYFERKYRYEFQKSILKDRNSYSKTDYDATFMRMKEDHMKNGQLKPGYNLQIAT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEC
NSQFVLSYNVYQNPTDTRTMIPFLNSIQETYGHLPEYIVADAGYGSESNYKAIIDDFNRT
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCCC
PLITYGMFIKDKTKKYKSDIFNTQNWNYDEINDEFICPNNKRLGFKRYAYRHDKYGYKRD
CEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCC
FKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKSQINKKLSEPETKNIYSQRKI
CEEEECCCCCCCCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCC
DVEPVFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKIYKKDNFY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEE
IISIEIVFFHLSKNFMSRTHYDLFFYC
EEEEEEEEEEHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MMLKVILYAYTQSVFSGRKIEKMLNDSIRMMWLSQNQKPSYKTINQFRVNPKVDALLESL
CHHHHHHHHHHHHHHCCHHHHHHHCCHHEEEEECCCCCCCHHHHHHEECCCHHHHHHHHH
FIQFYSQCVKQNLIDDKAIFIDGTKIEANANRYTFVWKKSIQNHESKMNEDSKALYHELV
HHHHHHHHHHHHCCCCCEEEEECCEEEECCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHH
TNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHINNEKCTKTRKQIRLKRTKIKK
HHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YKKQINDYFERKYRYEFQKSILKDRNSYSKTDYDATFMRMKEDHMKNGQLKPGYNLQIAT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEC
NSQFVLSYNVYQNPTDTRTMIPFLNSIQETYGHLPEYIVADAGYGSESNYKAIIDDFNRT
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCCC
PLITYGMFIKDKTKKYKSDIFNTQNWNYDEINDEFICPNNKRLGFKRYAYRHDKYGYKRD
CEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCC
FKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKSQINKKLSEPETKNIYSQRKI
CEEEECCCCCCCCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCC
DVEPVFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKIYKKDNFY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEE
IISIEIVFFHLSKNFMSRTHYDLFFYC
EEEEEEEEEEHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA