| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is etp
Identifier: 161486513
GI number: 161486513
Start: 1036098
End: 1036544
Strand: Reverse
Name: etp
Synonym: S1051
Alternate gene names: 161486513
Gene position: 1036544-1036098 (Counterclockwise)
Preceding gene: 30062520
Following gene: 30062509
Centisome position: 22.54
GC content: 51.9
Gene sequence:
>447_bases ATGGCCCAACTAAAATTTAACTCAATCCTAGTGGTTTGTACCGGCAACATTTGCCGTTCGCCCATTGGCGAGCGCTTGCT GCGTAAACGTCTGCCGGGCGTAAAAGTCAAATCGGCAGGTGTTCATGGTCTGGTAAAACACCCTGCAGATGCGACAGCGG CAGATGTTGCCGCTAATCATGGCGTATCTCTTGAAGGACATGCCGGACGTAAGCTCACTGCTGAGATGGCACGAAATTAC GATCTGATTCTGGCAATGGAGTCGGAACATATTGCTCAGGTTACCGCAATTGCTCCCGAGGTCCGCGGGAAGACAATGCT GTTTGGGCAATGGCTGGAACAGAAAGAGATCCCGGATCCCTATCGTAAAAGTCAGGACGCATTTGAACATGTCTACAGTA TGTTGGAGCGCGCCAGTCAGGAATGGGCGAAGCGCCTCAGCCGGTAA
Upstream 100 bases:
>100_bases CTACCGCGCCGCTGGCTCGTTGGAACCGTGTGATTTCTCTGCTGGTACCGACGATTTCCGGGGTGCATGACCTGACAGAG ACTTCACGGTGGATTCAAAC
Downstream 100 bases:
>100_bases TTTGAGTTTATAAAATACGATGACAACTAAAAATATGAATACGCCACCAGGCAGCACTCAGGAAAATGAGATCGATCTGC TTCGTCTGGTCGGCGAGTTA
Product: phosphotyrosine-protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVKHPADATAADVAANHGVSLEGHAGRKLTAEMARNY DLILAMESEHIAQVTAIAPEVRGKTMLFGQWLEQKEIPDPYRKSQDAFEHVYSMLERASQEWAKRLSR
Sequences:
>Translated_148_residues MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVKHPADATAADVAANHGVSLEGHAGRKLTAEMARNY DLILAMESEHIAQVTAIAPEVRGKTMLFGQWLEQKEIPDPYRKSQDAFEHVYSMLERASQEWAKRLSR >Mature_147_residues AQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYD LILAMESEHIAQVTAIAPEVRGKTMLFGQWLEQKEIPDPYRKSQDAFEHVYSMLERASQEWAKRLSR
Specific function: Dephosphorylates etk [H]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI4757714, Length=157, Percent_Identity=30.5732484076433, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI6005988, Length=157, Percent_Identity=30.5732484076433, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI87081812, Length=148, Percent_Identity=99.3243243243243, Blast_Score=306, Evalue=4e-85, Organism=Escherichia coli, GI1788375, Length=142, Percent_Identity=56.3380281690141, Blast_Score=175, Evalue=9e-46, Organism=Drosophila melanogaster, GI78706770, Length=151, Percent_Identity=32.4503311258278, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI78706772, Length=151, Percent_Identity=32.4503311258278, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 16416; Mature: 16285
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVKHPADATAADVAANH CCCCCCCCEEEEEECHHHCCHHHHHHHHHHCCCCEEECCCCCHHHCCCCCCHHHHHHHCC GVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVRGKTMLFGQWLEQKEIPDP CCCCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCH YRKSQDAFEHVYSMLERASQEWAKRLSR HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVKHPADATAADVAANH CCCCCCCEEEEEECHHHCCHHHHHHHHHHCCCCEEECCCCCHHHCCCCCCHHHHHHHCC GVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVRGKTMLFGQWLEQKEIPDP CCCCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCH YRKSQDAFEHVYSMLERASQEWAKRLSR HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]