Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 161485677

Identifier: 161485677

GI number: 161485677

Start: 1562132

End: 1562692

Strand: Reverse

Name: 161485677

Synonym: MM_1313

Alternate gene names: NA

Gene position: 1562692-1562132 (Counterclockwise)

Preceding gene: 21227416

Following gene: 21227414

Centisome position: 38.15

GC content: 45.1

Gene sequence:

>561_bases
ATGAAGATAATTGCGTTTGTAGGCATGCCAGCTTCTGGGAAATCCGAGGCTTCCAGGATTGCTGCTGAGATGGGGATCCC
TGTTATAATTATGGGTGACGTTATCAGGAAGGAAGTACTGAAGCGTGGGCTTGAACCCAATGATTCCAATACCGGAATGG
TTGCAACAGATCTTCGCAAGCATGAAGGCATGGGTGCTGTTGCCAGAAGATGTATTTCTCAAATAAGAGAAACAGGCTCG
GAACTTGTAGTTGTGGACGGTGTGCGCGGGATTGCTGAAGTTGAGTGTTTCAGGAAGGAATTCGGAAAAGGCTTTATCCT
GATTTCCATTTACGCTCCCATTGAAGTACGCTTCTCCAGGGTACAGAAGAGGGGGAGAAGTGACGATATGAACAGTATCG
AAGGCCTTCGCCATAGAGATGAAAGGGAACTCAGCTGGGGCATGGGAGAAGCCATAGATGCTTCCAATGTAGAAATTGAA
AATAACTTCACGCTTGAGACTTTCAGAAAAGATGTTAGAGACGTTTTGAGTAACTATTTAGAGGCTGATCTGGAAAAATA
A

Upstream 100 bases:

>100_bases
AAATTTATTGAAGGTAAAACTTTATTAAGAATCTAATTCAGATTTATCTCTCAAACTTATAACTAAAATTCAGGTATTCA
GATTTAAAAGGTAATTTTTG

Downstream 100 bases:

>100_bases
TTCAAATAACCTCAATAATCTCTAACAATTTCTAACAATTTTTAATAATCTCAAACAATCTCAAATAATCCCAATAATCT
AAAGAAAAAAGCTGGTAGAA

Product: hypothetical protein

Products: ADP

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRKHEGMGAVARRCISQIRETGS
ELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSRVQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIE
NNFTLETFRKDVRDVLSNYLEADLEK

Sequences:

>Translated_186_residues
MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRKHEGMGAVARRCISQIRETGS
ELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSRVQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIE
NNFTLETFRKDVRDVLSNYLEADLEK
>Mature_186_residues
MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRKHEGMGAVARRCISQIRETGS
ELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSRVQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIE
NNFTLETFRKDVRDVLSNYLEADLEK

Specific function: Unknown

COG id: COG0237

COG function: function code H; Dephospho-CoA kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0200 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1313_METMA (Q8PXA9)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_633337.2
- ProteinModelPortal:   Q8PXA9
- GeneID:   1479655
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_1313
- NMPDR:   fig|192952.1.peg.1313
- HOGENOM:   HBG297308
- OMA:   IGITGMP
- ProtClustDB:   PRK01184
- BioCyc:   MMAZ192952:MM1313-MONOMER
- HAMAP:   MF_01111
- InterPro:   IPR022970
- InterPro:   IPR010488

Pfam domain/function: PF06414 Zeta_toxin

EC number: 2.7.4.3

Molecular weight: Translated: 20762; Mature: 20762

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRK
CEEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEHHHHH
HEGMGAVARRCISQIRETGSELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSR
HCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHH
VQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIENNFTLETFRKDVRDVLSNYL
HHHCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
EADLEK
HHHCCC
>Mature Secondary Structure
MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRK
CEEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEHHHHH
HEGMGAVARRCISQIRETGSELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSR
HCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHH
VQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIENNFTLETFRKDVRDVLSNYL
HHHCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
EADLEK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; AMP

Specific reaction: ATP + AMP = 2 ADP

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824