| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 161485677
Identifier: 161485677
GI number: 161485677
Start: 1562132
End: 1562692
Strand: Reverse
Name: 161485677
Synonym: MM_1313
Alternate gene names: NA
Gene position: 1562692-1562132 (Counterclockwise)
Preceding gene: 21227416
Following gene: 21227414
Centisome position: 38.15
GC content: 45.1
Gene sequence:
>561_bases ATGAAGATAATTGCGTTTGTAGGCATGCCAGCTTCTGGGAAATCCGAGGCTTCCAGGATTGCTGCTGAGATGGGGATCCC TGTTATAATTATGGGTGACGTTATCAGGAAGGAAGTACTGAAGCGTGGGCTTGAACCCAATGATTCCAATACCGGAATGG TTGCAACAGATCTTCGCAAGCATGAAGGCATGGGTGCTGTTGCCAGAAGATGTATTTCTCAAATAAGAGAAACAGGCTCG GAACTTGTAGTTGTGGACGGTGTGCGCGGGATTGCTGAAGTTGAGTGTTTCAGGAAGGAATTCGGAAAAGGCTTTATCCT GATTTCCATTTACGCTCCCATTGAAGTACGCTTCTCCAGGGTACAGAAGAGGGGGAGAAGTGACGATATGAACAGTATCG AAGGCCTTCGCCATAGAGATGAAAGGGAACTCAGCTGGGGCATGGGAGAAGCCATAGATGCTTCCAATGTAGAAATTGAA AATAACTTCACGCTTGAGACTTTCAGAAAAGATGTTAGAGACGTTTTGAGTAACTATTTAGAGGCTGATCTGGAAAAATA A
Upstream 100 bases:
>100_bases AAATTTATTGAAGGTAAAACTTTATTAAGAATCTAATTCAGATTTATCTCTCAAACTTATAACTAAAATTCAGGTATTCA GATTTAAAAGGTAATTTTTG
Downstream 100 bases:
>100_bases TTCAAATAACCTCAATAATCTCTAACAATTTCTAACAATTTTTAATAATCTCAAACAATCTCAAATAATCCCAATAATCT AAAGAAAAAAGCTGGTAGAA
Product: hypothetical protein
Products: ADP
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRKHEGMGAVARRCISQIRETGS ELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSRVQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIE NNFTLETFRKDVRDVLSNYLEADLEK
Sequences:
>Translated_186_residues MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRKHEGMGAVARRCISQIRETGS ELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSRVQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIE NNFTLETFRKDVRDVLSNYLEADLEK >Mature_186_residues MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRKHEGMGAVARRCISQIRETGS ELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSRVQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIE NNFTLETFRKDVRDVLSNYLEADLEK
Specific function: Unknown
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0200 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1313_METMA (Q8PXA9)
Other databases:
- EMBL: AE008384 - RefSeq: NP_633337.2 - ProteinModelPortal: Q8PXA9 - GeneID: 1479655 - GenomeReviews: AE008384_GR - KEGG: mma:MM_1313 - NMPDR: fig|192952.1.peg.1313 - HOGENOM: HBG297308 - OMA: IGITGMP - ProtClustDB: PRK01184 - BioCyc: MMAZ192952:MM1313-MONOMER - HAMAP: MF_01111 - InterPro: IPR022970 - InterPro: IPR010488
Pfam domain/function: PF06414 Zeta_toxin
EC number: 2.7.4.3
Molecular weight: Translated: 20762; Mature: 20762
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRK CEEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEHHHHH HEGMGAVARRCISQIRETGSELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSR HCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHH VQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIENNFTLETFRKDVRDVLSNYL HHHCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH EADLEK HHHCCC >Mature Secondary Structure MKIIAFVGMPASGKSEASRIAAEMGIPVIIMGDVIRKEVLKRGLEPNDSNTGMVATDLRK CEEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEHHHHH HEGMGAVARRCISQIRETGSELVVVDGVRGIAEVECFRKEFGKGFILISIYAPIEVRFSR HCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHH VQKRGRSDDMNSIEGLRHRDERELSWGMGEAIDASNVEIENNFTLETFRKDVRDVLSNYL HHHCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH EADLEK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; AMP
Specific reaction: ATP + AMP = 2 ADP
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824