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The map label for this gene is flaF

Identifier: 161485648

GI number: 161485648

Start: 1608675

End: 1609037

Strand: Direct

Name: flaF

Synonym: CC_1459

Alternate gene names: 161485648

Gene position: 1608675-1609037 (Clockwise)

Preceding gene: 16125707

Following gene: 16125709

Centisome position: 40.05

GC content: 65.84

Gene sequence:

>363_bases
ATGTCTCTTCGGGCGTATCAGCAGGCGGCGACGCGGGCTGAGAATCCCCGTGAAATGGAGTACCGCCTGTTCGGGCAGGT
GACGCGCGCCCTGATGGATGCGTCGCAGGCCCCGGCGGACGACATCGCCACGCGGATCGATGCGCTGGACTGGAACCGCA
AGGTCTGGTCCGCGCTCGCGACCGACTGCGCGCTTCCTGAGAACCAGCTCCCGATGGAGCTGCGCGCCAGCATCATTTCG
CTGAGCCTCTGGGTGGGGCGTCACTCCAGTGCGGTCATGCGCAAGGAGGAGGATTTTGAGCCCCTCATCGAGATCAATCG
CATGATCATGCAGGGGCTGGCTGGCCGCGCCGACGCGGCCTGA

Upstream 100 bases:

>100_bases
GACTGCATCGCCATCTCCAAGCACGTGATGGCGCGAGAATACTACAAGGCTCTGATGTTGAGCCGGAAGCTTATCGAGTA
CGAAGACGAGAGGTTGGGGC

Downstream 100 bases:

>100_bases
TTCTGCCTTTCGGGCAAGGCTGTATGTCTTGCCCAGTCATTCTGGAAAAAGCTGCCGCCCGGCGAATGTTGCATTCGCCG
GGCGGTTTTGTTTTTGGCCG

Product: flagellar biosynthesis regulatory protein FlaF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSLRAYQQAATRAENPREMEYRLFGQVTRALMDASQAPADDIATRIDALDWNRKVWSALATDCALPENQLPMELRASIIS
LSLWVGRHSSAVMRKEEDFEPLIEINRMIMQGLAGRADAA

Sequences:

>Translated_120_residues
MSLRAYQQAATRAENPREMEYRLFGQVTRALMDASQAPADDIATRIDALDWNRKVWSALATDCALPENQLPMELRASIIS
LSLWVGRHSSAVMRKEEDFEPLIEINRMIMQGLAGRADAA
>Mature_119_residues
SLRAYQQAATRAENPREMEYRLFGQVTRALMDASQAPADDIATRIDALDWNRKVWSALATDCALPENQLPMELRASIISL
SLWVGRHSSAVMRKEEDFEPLIEINRMIMQGLAGRADAA

Specific function: Required for synthesis of the 25 kDa and 27 kDa flagellins and appears to be important for flagellin assembly [H]

COG id: COG5442

COG function: function code N; Flagellar biosynthesis regulator FlaF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010845 [H]

Pfam domain/function: PF07309 FlaF [H]

EC number: NA

Molecular weight: Translated: 13507; Mature: 13375

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRAYQQAATRAENPREMEYRLFGQVTRALMDASQAPADDIATRIDALDWNRKVWSALA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH
TDCALPENQLPMELRASIISLSLWVGRHSSAVMRKEEDFEPLIEINRMIMQGLAGRADAA
HHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLRAYQQAATRAENPREMEYRLFGQVTRALMDASQAPADDIATRIDALDWNRKVWSALA
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH
TDCALPENQLPMELRASIISLSLWVGRHSSAVMRKEEDFEPLIEINRMIMQGLAGRADAA
HHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1699845; 11259647 [H]