| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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The map label for this gene is pheT
Identifier: 161484930
GI number: 161484930
Start: 700236
End: 701885
Strand: Direct
Name: pheT
Synonym: MTH770
Alternate gene names: 161484930
Gene position: 700236-701885 (Clockwise)
Preceding gene: 15678793
Following gene: 15678808
Centisome position: 39.98
GC content: 51.88
Gene sequence:
>1650_bases ATGCCTGTTATAACGTTCGATTACGATGACCTGAAGGAACTGGGCATTGATATTGATAGGGAGAAGCTCCTTGACGTTCT GCCGATGATGGGAAGTGATATAGAGGACTTTGATGACGAAAGCATTAAGGTGGAGTTTTTTCCCAACCGTCCTGACCTGC TCTCGGTTGAGGGTGTTGCAAGGAGCCTCCGCGGATTCCTTGGAATTGAAAAGGGTATGCCATCCTATGATGTCCATGAC TCCGGGGTGGAGGTCACAGTAGATGAGTCTGTACTTGATGTGAGGCCATACCTTGGAATGGCCGTCATAGAGGACGTTCA GTTCACCGATAAAAAACTTAAACAGGTCATGGAGTTCCAGGAGGACCTGCACTGGGTCATAGGCAGGGACCGCAGGAAGG TGGCCATAGGTATCCATGACCTTGACCGTGTCGAGCCACCCTTCCTCTACAGTGGCGTTGAACCGGAGGGAGTCACATTC ACACCCCTTGACAGTGTATGTGAAATGACACCCCATGAAATACTCGAGGAGCACCCCAAGGGTGTCAGTTACGCCCACCT CCTCCGGGACCATGACCGTTACCCCCTGATAACAGATAAGAATGGGGACGTTCTCTCCATGCCCCCCATAATAAATGGGG AGCTCACCAAGTTAACCGTGAACACCCGCAGAATACTTGTGGATGTCACAGGAACCGATGATAGGGCTGTCAGACAGACC CTGAATATCATATGCACATCCTTTGCAGAGGCGGGTGGAAGGATAGGCTCGGTGAGGGTTAAGCGTCCTGATGGAGAGCT GCATCTACCAGACCTCACACCACGTGAGATGAGGGTATCTGTCTCAGAAGCCTCACGGATAACCGGACTTGAACTCAGTG CAGATGAGGTCATGGATCTCCTCATGAAGGCCCGGATGGACGCCCGGAGGACCTCAGATGATGAGGTGGTTGCGGTTATA CCCGCCTACCGGGTGGATATACTCCACGAGGTTGACCTTGTTGAGAACATAGCTGTGCAGCACTGCATAGGGAGGATTGA ACCCGAACTTCCTGATATAGCGACCATTGCAGAGGAGGACACCTGGAGCAGGGCAGACGCGTCTATAAGGGAGGTCATGG TGGGCCTCGGATTCCAGGAGGTTATGAGCCTCATGTTAACCAGTGAGGAGAGCCACTACAGGAGGATGAGGCTTGAGGAG GATGAAAGGGTTGAGGTTGCCCAGCCCATTTCCCAAGACAGGACCATGATCCGCAAGAGTCTGCTCAACGGCCTCCTTGA GTTCTTCGAGGACAACAAGCACGAGGATCTTCCACAGAAGATATTCGAGGTCGGGGATGTGGTGTACATTAACCCTGAAT CTGAGACCCGTAGCAGGGTCGTTACGAAGCTTGCATGCGCAGTCACGCACTCCAGTGCAGGTTTCACCGAGATAAAGTCC CTTGCAGCGGCTGTGGTTGAGAACCTCGGTTACGAGTTCAGGATAGAGCCCCTTGAACACCCATCCTTCATAGAGGGAAG ATGTGCAGCCATAGAATCTGAGGGCAAATCCTCAGCCATAGGTGGATTCTTCGGTGAGGTCCATCCTGAGGTTGTAACAA ACTTCAACCTGGAATATCCTGTTATTGCACTTGAAATCGAATTTAAGTAG
Upstream 100 bases:
>100_bases CTCGTTGATGCAGCCCACACCCACGGACTCGCTGGTGGCGGTTAATTATTTATTTGATACCATGATAACATTCAAACATC ACATTTACTGGAGGATCACC
Downstream 100 bases:
>100_bases AAATAAATGGAATATGAACTTTCAGGGCTTTCCAGCCACTGATACCCTTATCCTTCTGTTTCTGGGTCCGTCGAGTTCTG CGAAGAAGATGCTCTGCCAG
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MPVITFDYDDLKELGIDIDREKLLDVLPMMGSDIEDFDDESIKVEFFPNRPDLLSVEGVARSLRGFLGIEKGMPSYDVHD SGVEVTVDESVLDVRPYLGMAVIEDVQFTDKKLKQVMEFQEDLHWVIGRDRRKVAIGIHDLDRVEPPFLYSGVEPEGVTF TPLDSVCEMTPHEILEEHPKGVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELTKLTVNTRRILVDVTGTDDRAVRQT LNIICTSFAEAGGRIGSVRVKRPDGELHLPDLTPREMRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDDEVVAVI PAYRVDILHEVDLVENIAVQHCIGRIEPELPDIATIAEEDTWSRADASIREVMVGLGFQEVMSLMLTSEESHYRRMRLEE DERVEVAQPISQDRTMIRKSLLNGLLEFFEDNKHEDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKS LAAAVVENLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALEIEFK
Sequences:
>Translated_549_residues MPVITFDYDDLKELGIDIDREKLLDVLPMMGSDIEDFDDESIKVEFFPNRPDLLSVEGVARSLRGFLGIEKGMPSYDVHD SGVEVTVDESVLDVRPYLGMAVIEDVQFTDKKLKQVMEFQEDLHWVIGRDRRKVAIGIHDLDRVEPPFLYSGVEPEGVTF TPLDSVCEMTPHEILEEHPKGVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELTKLTVNTRRILVDVTGTDDRAVRQT LNIICTSFAEAGGRIGSVRVKRPDGELHLPDLTPREMRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDDEVVAVI PAYRVDILHEVDLVENIAVQHCIGRIEPELPDIATIAEEDTWSRADASIREVMVGLGFQEVMSLMLTSEESHYRRMRLEE DERVEVAQPISQDRTMIRKSLLNGLLEFFEDNKHEDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKS LAAAVVENLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALEIEFK >Mature_548_residues PVITFDYDDLKELGIDIDREKLLDVLPMMGSDIEDFDDESIKVEFFPNRPDLLSVEGVARSLRGFLGIEKGMPSYDVHDS GVEVTVDESVLDVRPYLGMAVIEDVQFTDKKLKQVMEFQEDLHWVIGRDRRKVAIGIHDLDRVEPPFLYSGVEPEGVTFT PLDSVCEMTPHEILEEHPKGVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELTKLTVNTRRILVDVTGTDDRAVRQTL NIICTSFAEAGGRIGSVRVKRPDGELHLPDLTPREMRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDDEVVAVIP AYRVDILHEVDLVENIAVQHCIGRIEPELPDIATIAEEDTWSRADASIREVMVGLGFQEVMSLMLTSEESHYRRMRLEED ERVEVAQPISQDRTMIRKSLLNGLLEFFEDNKHEDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKSL AAAVVENLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALEIEFK
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B5 domain
Homologues:
Organism=Homo sapiens, GI124028525, Length=529, Percent_Identity=31.5689981096408, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI24308207, Length=165, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17533403, Length=533, Percent_Identity=32.2701688555347, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17510303, Length=201, Percent_Identity=26.3681592039801, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323089, Length=539, Percent_Identity=29.1280148423006, Blast_Score=233, Evalue=7e-62, Organism=Drosophila melanogaster, GI21355211, Length=517, Percent_Identity=30.9477756286267, Blast_Score=252, Evalue=4e-67,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYFB_METTH (O26864)
Other databases:
- EMBL: AE000666 - PIR: A69203 - RefSeq: NP_275912.2 - ProteinModelPortal: O26864 - SMR: O26864 - IntAct: O26864 - STRING: O26864 - GeneID: 1471178 - GenomeReviews: AE000666_GR - KEGG: mth:MTH770 - NMPDR: fig|187420.1.peg.767 - eggNOG: arNOG04353 - HOGENOM: HBG497667 - OMA: LLTRMCL - PhylomeDB: O26864 - ProtClustDB: PRK09616 - BioCyc: MTHE187420:MTH770-MONOMER - BRENDA: 6.1.1.20 - GO: GO:0005737 - HAMAP: MF_00284 - InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR004531 - InterPro: IPR022918 - Gene3D: G3DSA:3.30.56.20 - SMART: SM00873 - SMART: SM00874 - TIGRFAMs: TIGR00471
Pfam domain/function: PF03483 B3_4; PF03484 B5; SSF46955 Putativ_DNA_bind
EC number: =6.1.1.20
Molecular weight: Translated: 61805; Mature: 61674
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS51483 B5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVITFDYDDLKELGIDIDREKLLDVLPMMGSDIEDFDDESIKVEFFPNRPDLLSVEGVA CCEEECCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEHHHHH RSLRGFLGIEKGMPSYDVHDSGVEVTVDESVLDVRPYLGMAVIEDVQFTDKKLKQVMEFQ HHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH EDLHWVIGRDRRKVAIGIHDLDRVEPPFLYSGVEPEGVTFTPLDSVCEMTPHEILEEHPK HHHHHHHCCCCCEEEEEEHHHHCCCCCCEECCCCCCCCEECCHHHHHCCCHHHHHHHCCC GVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELTKLTVNTRRILVDVTGTDDRAVRQT CCHHHHHHHCCCCCCEEECCCCCEEECCCCCCCCEEEEEEECEEEEEEEECCCHHHHHHH LNIICTSFAEAGGRIGSVRVKRPDGELHLPDLTPREMRVSVSEASRITGLELSADEVMDL HHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCHHHHEEEHHHHCCCCCCCCCHHHHHHH LMKARMDARRTSDDEVVAVIPAYRVDILHEVDLVENIAVQHCIGRIEPELPDIATIAEED HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC TWSRADASIREVMVGLGFQEVMSLMLTSEESHYRRMRLEEDERVEVAQPISQDRTMIRKS CCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHH LLNGLLEFFEDNKHEDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKS HHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHH LAAAVVENLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYP HHHHHHHHCCCEEEECCCCCCCCCCCHHHEECCCCCCCCCCCHHHHCCHHHHHCCCCCCC VIALEIEFK EEEEEEECC >Mature Secondary Structure PVITFDYDDLKELGIDIDREKLLDVLPMMGSDIEDFDDESIKVEFFPNRPDLLSVEGVA CEEECCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEHHHHH RSLRGFLGIEKGMPSYDVHDSGVEVTVDESVLDVRPYLGMAVIEDVQFTDKKLKQVMEFQ HHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH EDLHWVIGRDRRKVAIGIHDLDRVEPPFLYSGVEPEGVTFTPLDSVCEMTPHEILEEHPK HHHHHHHCCCCCEEEEEEHHHHCCCCCCEECCCCCCCCEECCHHHHHCCCHHHHHHHCCC GVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELTKLTVNTRRILVDVTGTDDRAVRQT CCHHHHHHHCCCCCCEEECCCCCEEECCCCCCCCEEEEEEECEEEEEEEECCCHHHHHHH LNIICTSFAEAGGRIGSVRVKRPDGELHLPDLTPREMRVSVSEASRITGLELSADEVMDL HHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCHHHHEEEHHHHCCCCCCCCCHHHHHHH LMKARMDARRTSDDEVVAVIPAYRVDILHEVDLVENIAVQHCIGRIEPELPDIATIAEED HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC TWSRADASIREVMVGLGFQEVMSLMLTSEESHYRRMRLEEDERVEVAQPISQDRTMIRKS CCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHH LLNGLLEFFEDNKHEDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKS HHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHH LAAAVVENLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYP HHHHHHHHCCCEEEECCCCCCCCCCCHHHEECCCCCCCCCCCHHHHCCHHHHHCCCCCCC VIALEIEFK EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463; 10575359