| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is uhpC [H]
Identifier: 161484734
GI number: 161484734
Start: 4249915
End: 4251246
Strand: Direct
Name: uhpC [H]
Synonym: y3821
Alternate gene names: 161484734
Gene position: 4249915-4251246 (Clockwise)
Preceding gene: 22127691
Following gene: 22127693
Centisome position: 92.37
GC content: 47.37
Gene sequence:
>1332_bases ATGTGGTTTTTCCTCAAAAGTCGCGATAACGTACCGCTAGTAACGGATCAAACACAAATTGATTCATCCTATAAGTATTG GCGTATCCAATTAATGTGGACGATGTATATCGGCTACGCTGCGTTTTATTTCACTCGTAAAAGTTTCAATTTTATTATGC CTGCTATGCTCACGGATCTAGGGCTGAGCATGTCTGATGTCGGGATTTTAGGCACGCTGTTTTACATCACTTACGGCTGC TCTAAATTTGTCTCTGGGATGATCAGCGATCGCTCAAATCCGCGTTATTTTATGGGGATCGGGTTGGTCATGACGGGGAT TATTAATATCCTGTTTGGCATGAGCTCATCACTTTTGGTCCTTGGCGCCTTGTGGATCCTCAATGCGTTCTTCCAAGGTT GGGGCTGGCCACCATGTTCTAAAATATTGACCAGTTGGTACTCGCGTTCTGAACGTGGTGGCTGGTGGGCTATCTGGAAC ACCTCACATAACTTTGGCGGGGCGCTGATCCCCTTGCTCGTCGGGGTGATTACTCTGCACTTTAGCTGGCGCTACGGGAT GATCATCCCCGGAATTATAGGTGTGGTGATTGGTTTGCTGATGTGTTGGCGTCTGCGAGATAAGCCAAGCACCATGGGCC TACCAAGTGTGGGTAAATGGCGCAATGATGCGATGGAGCTGATCCAGGAATCCGAAGGCCAGGGGCTGTCTAATAAAGAA ATTGTGAAGCGTTATGTCTTAACCAATAAATATATTTGGTTGTTAGCCGTTTCCTATGTGCTGGTTTATATCGTTCGAAC CGCGATTAATGACTGGGGTAACCTCTATCTGACCCAAGAGAAAGGTTATTCGTTGCTGACCGCTAACTCTGCAATTTCAT TATTTGAAGTGGGTGGATTTATTGGTTCATTGGTCGCGGGTTGGGGTTCTGATAAGTGGTTCCGTGGCAATCGTGGGCCG ATGAACCTGATTTTTGCTATTGGTATCTTCCTCTCAGTTGCATCACTGTGGACGTTGCCAAGCATCAGTTTTGTCTTACA GGCAGGCTGCTTCTTTGCGATTGGTTTCTTTATTTTCGGGCCACAAATGCTGATTGGTATGGCTGCTGCTGAGTGCTCTC ATAAGGATGCCGCTGGCGCTGCAACCGGCTTTGTTGGGCTATTTGCCTATTTAGGGGCGGCTTTATCGGGTTACCCTATC GCTCGCGTCATGGAAATCTGGCATTGGAATGGTTTCTTTGTGGTTATCTCTGTGGCGGCATGTTTATCTGCTTTCTTCTT ATTGCCATTCCTGCGGGCGCAATCGCCGCAGTTAAAGCAAGCGACAACCTGA
Upstream 100 bases:
>100_bases AACTAAGAAATATTCTCGTTGGTAGCGAGAATTCCCCCGTGTGTTTTCATACACATGCAGATGATGATTATTGCACTTAC AAAATACCCTGAGGCCCGAG
Downstream 100 bases:
>100_bases TTTGAGCGTGAAGGCGGCCATTTTCACTGCGGGTGATGCTTTTAACAGCAGTCATCCGCAGGTTATTAAAAAGTGATTGA CGCCCCAGAGCTGTAGCAGT
Product: regulatory protein UhpC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MWFFLKSRDNVPLVTDQTQIDSSYKYWRIQLMWTMYIGYAAFYFTRKSFNFIMPAMLTDLGLSMSDVGILGTLFYITYGC SKFVSGMISDRSNPRYFMGIGLVMTGIINILFGMSSSLLVLGALWILNAFFQGWGWPPCSKILTSWYSRSERGGWWAIWN TSHNFGGALIPLLVGVITLHFSWRYGMIIPGIIGVVIGLLMCWRLRDKPSTMGLPSVGKWRNDAMELIQESEGQGLSNKE IVKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQEKGYSLLTANSAISLFEVGGFIGSLVAGWGSDKWFRGNRGP MNLIFAIGIFLSVASLWTLPSISFVLQAGCFFAIGFFIFGPQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPI ARVMEIWHWNGFFVVISVAACLSAFFLLPFLRAQSPQLKQATT
Sequences:
>Translated_443_residues MWFFLKSRDNVPLVTDQTQIDSSYKYWRIQLMWTMYIGYAAFYFTRKSFNFIMPAMLTDLGLSMSDVGILGTLFYITYGC SKFVSGMISDRSNPRYFMGIGLVMTGIINILFGMSSSLLVLGALWILNAFFQGWGWPPCSKILTSWYSRSERGGWWAIWN TSHNFGGALIPLLVGVITLHFSWRYGMIIPGIIGVVIGLLMCWRLRDKPSTMGLPSVGKWRNDAMELIQESEGQGLSNKE IVKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQEKGYSLLTANSAISLFEVGGFIGSLVAGWGSDKWFRGNRGP MNLIFAIGIFLSVASLWTLPSISFVLQAGCFFAIGFFIFGPQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPI ARVMEIWHWNGFFVVISVAACLSAFFLLPFLRAQSPQLKQATT >Mature_443_residues MWFFLKSRDNVPLVTDQTQIDSSYKYWRIQLMWTMYIGYAAFYFTRKSFNFIMPAMLTDLGLSMSDVGILGTLFYITYGC SKFVSGMISDRSNPRYFMGIGLVMTGIINILFGMSSSLLVLGALWILNAFFQGWGWPPCSKILTSWYSRSERGGWWAIWN TSHNFGGALIPLLVGVITLHFSWRYGMIIPGIIGVVIGLLMCWRLRDKPSTMGLPSVGKWRNDAMELIQESEGQGLSNKE IVKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQEKGYSLLTANSAISLFEVGGFIGSLVAGWGSDKWFRGNRGP MNLIFAIGIFLSVASLWTLPSISFVLQAGCFFAIGFFIFGPQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPI ARVMEIWHWNGFFVVISVAACLSAFFLLPFLRAQSPQLKQATT
Specific function: UhpC is required for uhpT expression, it may act jointly with the uhpB signaling protein [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI256219598, Length=427, Percent_Identity=35.1288056206089, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI4503847, Length=427, Percent_Identity=35.1288056206089, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI256219483, Length=427, Percent_Identity=35.1288056206089, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI256219543, Length=449, Percent_Identity=34.5211581291759, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI256219564, Length=358, Percent_Identity=34.6368715083799, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI46361976, Length=393, Percent_Identity=21.3740458015267, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI14150047, Length=178, Percent_Identity=24.1573033707865, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI223717983, Length=151, Percent_Identity=27.8145695364238, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI38093649, Length=151, Percent_Identity=27.8145695364238, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI87082310, Length=434, Percent_Identity=65.668202764977, Blast_Score=624, Evalue=1e-180, Organism=Escherichia coli, GI1788573, Length=429, Percent_Identity=36.1305361305361, Blast_Score=285, Evalue=4e-78, Organism=Escherichia coli, GI2367259, Length=419, Percent_Identity=32.9355608591885, Blast_Score=181, Evalue=7e-47, Organism=Escherichia coli, GI2367379, Length=375, Percent_Identity=23.7333333333333, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082320, Length=339, Percent_Identity=22.4188790560472, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17561094, Length=403, Percent_Identity=22.5806451612903, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17542316, Length=457, Percent_Identity=22.3194748358862, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI133930953, Length=433, Percent_Identity=24.7113163972286, Blast_Score=92, Evalue=7e-19, Organism=Caenorhabditis elegans, GI133901856, Length=439, Percent_Identity=23.2346241457859, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI133901854, Length=439, Percent_Identity=23.2346241457859, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17539138, Length=291, Percent_Identity=21.6494845360825, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24656866, Length=423, Percent_Identity=22.2222222222222, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI45550478, Length=423, Percent_Identity=22.2222222222222, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24656861, Length=423, Percent_Identity=22.2222222222222, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49453; Mature: 49453
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFFLKSRDNVPLVTDQTQIDSSYKYWRIQLMWTMYIGYAAFYFTRKSFNFIMPAMLTDL CEEEEECCCCCCEEECCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GLSMSDVGILGTLFYITYGCSKFVSGMISDRSNPRYFMGIGLVMTGIINILFGMSSSLLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHH LGALWILNAFFQGWGWPPCSKILTSWYSRSERGGWWAIWNTSHNFGGALIPLLVGVITLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH FSWRYGMIIPGIIGVVIGLLMCWRLRDKPSTMGLPSVGKWRNDAMELIQESEGQGLSNKE HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH IVKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQEKGYSLLTANSAISLFEVGGF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHHHHHH IGSLVAGWGSDKWFRGNRGPMNLIFAIGIFLSVASLWTLPSISFVLQAGCFFAIGFFIFG HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPIARVMEIWHWNGFFVVISVAA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH CLSAFFLLPFLRAQSPQLKQATT HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MWFFLKSRDNVPLVTDQTQIDSSYKYWRIQLMWTMYIGYAAFYFTRKSFNFIMPAMLTDL CEEEEECCCCCCEEECCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GLSMSDVGILGTLFYITYGCSKFVSGMISDRSNPRYFMGIGLVMTGIINILFGMSSSLLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHH LGALWILNAFFQGWGWPPCSKILTSWYSRSERGGWWAIWNTSHNFGGALIPLLVGVITLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH FSWRYGMIIPGIIGVVIGLLMCWRLRDKPSTMGLPSVGKWRNDAMELIQESEGQGLSNKE HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH IVKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQEKGYSLLTANSAISLFEVGGF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHHHHHH IGSLVAGWGSDKWFRGNRGPMNLIFAIGIFLSVASLWTLPSISFVLQAGCFFAIGFFIFG HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPIARVMEIWHWNGFFVVISVAA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH CLSAFFLLPFLRAQSPQLKQATT HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1569007; 11677609 [H]