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The map label for this gene is rpl15p [H]

Identifier: 161484705

GI number: 161484705

Start: 1673107

End: 1673550

Strand: Reverse

Name: rpl15p [H]

Synonym: PF1802

Alternate gene names: 161484705

Gene position: 1673550-1673107 (Counterclockwise)

Preceding gene: 18978175

Following gene: 18978173

Centisome position: 87.7

GC content: 44.82

Gene sequence:

>444_bases
ATGATAAGGAGAAGGAAGAAGGTCAGAAAGTTGAGAGGCAGTCACACTCACGGATGGGGATGTAAGAAGAAGCACAGGGG
AGGAGGTAGCAAGGGCGGTAGAGGTATGGCAGGAACTGGAAAGAGAAACAAGAGCAAGTGGACTTGGACAATAAAATATG
CCCCCGACCACCTGGGTAAGAGAGGATTTTCAAGACCCCCAGAAGTCCAGAGGGAAGTTAGAGTTGTAAACCTAAAGTTT
ATCGATGAACACCTCGATGAGCTAATGCAAATGGGCATAGCATATGAAGAAGGAGGAAAAATAATCGTCGATGTAACGCA
ATTTGCTGATAAAGTCTTAGGTACTGGAAAGCTCACTAGACCTCTAGTAATTAAGGCAAGGGCATTTTCTCCAAAGGCAG
AAGAGAAAATTAAGGCTGCTGGAGGAGAAGCTGTTCTCGTTTAA

Upstream 100 bases:

>100_bases
AGGGGAAGCAAGAAGCGTTCCTTCAAAGAAGGAGGGGCCCTGGGTTATCGTGGCGAGAAAATTAATGAACTAATTGAGAG
AATGCTGTGAGGTGAAAGCG

Downstream 100 bases:

>100_bases
TCTCCCTTATTTTTTTGCTTCATGAGAATAAACGAGCAAAGGTGTTGAAACATGGGAGCTAGGGACATAATTTATGCTCT
AGAAAGATGGTTTCCCGAGG

Product: 50S ribosomal protein L15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MIRRRKKVRKLRGSHTHGWGCKKKHRGGGSKGGRGMAGTGKRNKSKWTWTIKYAPDHLGKRGFSRPPEVQREVRVVNLKF
IDEHLDELMQMGIAYEEGGKIIVDVTQFADKVLGTGKLTRPLVIKARAFSPKAEEKIKAAGGEAVLV

Sequences:

>Translated_147_residues
MIRRRKKVRKLRGSHTHGWGCKKKHRGGGSKGGRGMAGTGKRNKSKWTWTIKYAPDHLGKRGFSRPPEVQREVRVVNLKF
IDEHLDELMQMGIAYEEGGKIIVDVTQFADKVLGTGKLTRPLVIKARAFSPKAEEKIKAAGGEAVLV
>Mature_147_residues
MIRRRKKVRKLRGSHTHGWGCKKKHRGGGSKGGRGMAGTGKRNKSKWTWTIKYAPDHLGKRGFSRPPEVQREVRVVNLKF
IDEHLDELMQMGIAYEEGGKIIVDVTQFADKVLGTGKLTRPLVIKARAFSPKAEEKIKAAGGEAVLV

Specific function: Binds to the 23S rRNA [H]

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family [H]

Homologues:

Organism=Homo sapiens, GI4506625, Length=152, Percent_Identity=38.8157894736842, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001196
- InterPro:   IPR021131 [H]

Pfam domain/function: PF00828 Ribosomal_L18e [H]

EC number: NA

Molecular weight: Translated: 16400; Mature: 16400

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRRKKVRKLRGSHTHGWGCKKKHRGGGSKGGRGMAGTGKRNKSKWTWTIKYAPDHLGK
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHCC
RGFSRPPEVQREVRVVNLKFIDEHLDELMQMGIAYEEGGKIIVDVTQFADKVLGTGKLTR
CCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHCCEEECCCEEEEEHHHHHHHHHCCCCCCC
PLVIKARAFSPKAEEKIKAAGGEAVLV
CEEEEEECCCCCHHHHHHHCCCCEEEC
>Mature Secondary Structure
MIRRRKKVRKLRGSHTHGWGCKKKHRGGGSKGGRGMAGTGKRNKSKWTWTIKYAPDHLGK
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHCC
RGFSRPPEVQREVRVVNLKFIDEHLDELMQMGIAYEEGGKIIVDVTQFADKVLGTGKLTR
CCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHCCEEECCCEEEEEHHHHHHHHHCCCCCCC
PLVIKARAFSPKAEEKIKAAGGEAVLV
CEEEEEECCCCCHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]