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The map label for this gene is thf1 [H]

Identifier: 161407964

GI number: 161407964

Start: 764226

End: 764879

Strand: Direct

Name: thf1 [H]

Synonym: P9515_08431

Alternate gene names: 161407964

Gene position: 764226-764879 (Clockwise)

Preceding gene: 123966074

Following gene: 123966077

Centisome position: 44.84

GC content: 26.45

Gene sequence:

>654_bases
TTGAGTCAACATACGCTATGGTTATTAAGGTTTACATATAAAAAATTGAAAGAAAATTTGACTGTCTCAGAAAGTAAGAA
GTTATTCCATGAACAATTCCCTTTCGTTATTCCGGGTTTATATAAAAGGATAGTTGATGAAATGCTTGTTGAACTAAATC
TTTTAAATCACCAAAATGAATTTATTCAAGATGAATTGTTTTGCGTTGGTCTTACGGAAACTTTCAAAGAATTGACAAAA
GGGTATAAGCCAGAGTCTCATTTAGAACTTCTTTTTGAATCATTATGTAAGTCTTCAAATTTTATACCTTCAAAAATCAA
AGAAATTTCTCTTAAAACTCTTGAACAATATAAGGATAAATCTTTAAAAGAAATTTCAATTTTATTAAAAGAAAAAAGTA
CTTCTAATTTATACTCATCGAGAATATTGAATATAGGTATTTATTTGATTATCGCTAATGCCACTGACTTTAAGGGTTTG
AAGGATTCCGAGAAAAATAAAGCTATTACTGACAATATCAACAATTTAAATTTATCAGTTAATAAAGCAGAAAAAGATAT
TGGTATTTACAAAAGTAGTATTAAGAAAATGGAGCAAGCAAAAGAACTTCTTGAAGAAGCAAAAATTCAAAATAAGAAAA
AAGAGAATAAATAA

Upstream 100 bases:

>100_bases
AGTCTTGAGTAAATATCAAATACTCTTTCACTTCCACCAGATTCTTCCAAAACTAAAGGGATCATAATAATATTTATCTG
TTTATAAGATCCTAGCGATA

Downstream 100 bases:

>100_bases
TTCATAATTAAAAATTATTTATTAATTCTTCTCTTGTCTTTCCAGGAAATGTAAGAAATATAAATTACAGCAATGGTTAT
TAGAGTTAGTAAAGAAAAAG

Product: Thf1-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSQHTLWLLRFTYKKLKENLTVSESKKLFHEQFPFVIPGLYKRIVDEMLVELNLLNHQNEFIQDELFCVGLTETFKELTK
GYKPESHLELLFESLCKSSNFIPSKIKEISLKTLEQYKDKSLKEISILLKEKSTSNLYSSRILNIGIYLIIANATDFKGL
KDSEKNKAITDNINNLNLSVNKAEKDIGIYKSSIKKMEQAKELLEEAKIQNKKKENK

Sequences:

>Translated_217_residues
MSQHTLWLLRFTYKKLKENLTVSESKKLFHEQFPFVIPGLYKRIVDEMLVELNLLNHQNEFIQDELFCVGLTETFKELTK
GYKPESHLELLFESLCKSSNFIPSKIKEISLKTLEQYKDKSLKEISILLKEKSTSNLYSSRILNIGIYLIIANATDFKGL
KDSEKNKAITDNINNLNLSVNKAEKDIGIYKSSIKKMEQAKELLEEAKIQNKKKENK
>Mature_216_residues
SQHTLWLLRFTYKKLKENLTVSESKKLFHEQFPFVIPGLYKRIVDEMLVELNLLNHQNEFIQDELFCVGLTETFKELTKG
YKPESHLELLFESLCKSSNFIPSKIKEISLKTLEQYKDKSLKEISILLKEKSTSNLYSSRILNIGIYLIIANATDFKGLK
DSEKNKAITDNINNLNLSVNKAEKDIGIYKSSIKKMEQAKELLEEAKIQNKKKENK

Specific function: May be involved in photosynthetic membrane biogenesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the THF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017499 [H]

Pfam domain/function: PF11264 ThylakoidFormat [H]

EC number: NA

Molecular weight: Translated: 25239; Mature: 25107

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHTLWLLRFTYKKLKENLTVSESKKLFHEQFPFVIPGLYKRIVDEMLVELNLLNHQNE
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHH
FIQDELFCVGLTETFKELTKGYKPESHLELLFESLCKSSNFIPSKIKEISLKTLEQYKDK
HHHHHHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLKEISILLKEKSTSNLYSSRILNIGIYLIIANATDFKGLKDSEKNKAITDNINNLNLSV
HHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEE
NKAEKDIGIYKSSIKKMEQAKELLEEAKIQNKKKENK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQHTLWLLRFTYKKLKENLTVSESKKLFHEQFPFVIPGLYKRIVDEMLVELNLLNHQNE
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHH
FIQDELFCVGLTETFKELTKGYKPESHLELLFESLCKSSNFIPSKIKEISLKTLEQYKDK
HHHHHHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLKEISILLKEKSTSNLYSSRILNIGIYLIIANATDFKGLKDSEKNKAITDNINNLNLSV
HHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEE
NKAEKDIGIYKSSIKKMEQAKELLEEAKIQNKKKENK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]