BacMap

Definition	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome.
Accession	NC_003197
Length	4,857,432

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The map label for this gene is ydcW [H]

Identifier: 161353598

GI number: 161353598

Start: 1686834

End: 1688258

Strand: Reverse

Name: ydcW [H]

Synonym: STM1597

Alternate gene names: 161353598

Gene position: 1688258-1686834 (Counterclockwise)

Preceding gene: 16764942

Following gene: 16764940

Centisome position: 34.76

GC content: 55.65

Gene sequence:

>1425_bases
ATGCAATATCAATTACTGATTAATGGCGTGCTGGTGGACGGCGAGGGAGAAAGGCAGTCTGTTTATAACCCGGCGACAGG
CGAGGTCATACTTGAGATTGCGGAAGCGTCGCCCGCGCAGGTTGACGCCGCAGTGCAGGCCGCCGATAACGCGTTTGCCG
AATGGGGGCAGACCACACCCAAAGCACGGGCGGAATGTCTGTTAAAACTGGCGGACAGCATCGAGCAAAACGCCCTTGAG
TTCGCCCGGCTTGAATCGCAAAACTGCGGTAAGCCTTTGCACTGCGTAATTAATGATGAAATTCCGGCAATCGTGGATGT
CTTTCGCTTTTTTGCCGGCGCGGCCCGTTGTTTGAGTGGGCTGGCGGCGGGCGAATATCTGGAAGGACATACGTCGATGA
TCCGCCGGGATCCGATTGGCGTGGTTGCCTCTATCGCGCCGTGGAATTATCCGCTCATGATGGCGGCCTGGAAGCTGGCG
CCAGCGCTGGCGGCAGGTAACTGCGTGGTGATTAAGCCTTCTGAAATCACGCCGCTGACGGCGCTTAAACTTGCCGTGCT
GGCGAAGGATATCTTTCCGCCGGGGGTGCTCAATGTCCTGTTCGGACGAGGGCAAACTGTTGGCGATGTATTGACCGGCC
ATGAAAAAGTACGCATGGTCTCTTTAACCGGTTCTATCGCGACCGGGGAGCATATTCTGCGCCATACTGCGCCAGCGATA
AAACGTACGCATATGGAACTCGGTGGTAAAGCCCCGGTGATTGTTTTTGATGACGCCGATCTGGATGCGGTGGCGCAGGG
CGTCCGGACTTTTGGTTTCTATAATGCCGGACAGGATTGTACTGCGGCGTGCCGTATATACGCGCAGCGCGGTATCTATG
ATGCGCTGGTCGAAAAGCTAGGGAACGCAGTGAGCAGCCTGAAAATGGGCGCGCCGGAGGATGAGTCGACAGAGCTGGGG
CCGTTAAGTTCGCTGGCGCACCTGAAGCGCGTCACAGCGGCTGTAGAGGAGGCGAAGGCCCTCAGCCATATCCGTGTGAT
TACTGGCGGAAGTCAAACGGAAGGTAAAGGTTACTATTTCGCTCCGACGTTGCTGGCAGACGCAAAACAGGAAGATGCCA
TCGTGCAACGCGAGGTCTTCGGCCCGGTGGTCAGTATAACCGTCTTTGATGATGAAGATCAGGTTCTGAGGTGGGCCAAC
GATTCTCGCTATGGTCTGGCATCCTCCGTCTGGACTCAGGACGTCGGGCGGGCGCACCGGCTTAGCGCCAGATTGCAGTA
TGGCTGTACCTGGATTAATACCCATTTCATGTTGGTTAGCGAAATGCCGCATGGAGGGCAAAAACAGTCGGGATACGGCA
AAGATATGTCATTGTATGGTCTGGAAGACTACACCCTTGTCCGCCACATCATGGTTAAGCATTAA

Upstream 100 bases:

>100_bases
TTCCCGAGTGTGCCGGGTGAGCATCTGGCGCGCCGTCTATTTTTAGGAAAGCGGCGGCCCGTTCGCCGGAAATCGATTAA
TGACGATATGGGAAAATGCT

Downstream 100 bases:

>100_bases
GGATCATTTACTGTTCAGAAAAATCGTGAAAAAATAGGCGGGTGTCGGCGGAGAGGGGGACCTCCCCGCCAACATGCGCA
GCAAGTACTCAAAGGTTGAA

Product: gamma-aminobutyraldehyde dehydrogenase

Products: NA

Alternate protein names: 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; ABALDH [H]

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MQYQLLINGVLVDGEGERQSVYNPATGEVILEIAEASPAQVDAAVQAADNAFAEWGQTTPKARAECLLKLADSIEQNALE
FARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPIGVVASIAPWNYPLMMAAWKLA
PALAAGNCVVIKPSEITPLTALKLAVLAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAI
KRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDESTELG
PLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWAN
DSRYGLASSVWTQDVGRAHRLSARLQYGCTWINTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTLVRHIMVKH

Sequences:

>Translated_474_residues
MQYQLLINGVLVDGEGERQSVYNPATGEVILEIAEASPAQVDAAVQAADNAFAEWGQTTPKARAECLLKLADSIEQNALE
FARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPIGVVASIAPWNYPLMMAAWKLA
PALAAGNCVVIKPSEITPLTALKLAVLAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAI
KRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDESTELG
PLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWAN
DSRYGLASSVWTQDVGRAHRLSARLQYGCTWINTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTLVRHIMVKH
>Mature_474_residues
MQYQLLINGVLVDGEGERQSVYNPATGEVILEIAEASPAQVDAAVQAADNAFAEWGQTTPKARAECLLKLADSIEQNALE
FARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPIGVVASIAPWNYPLMMAAWKLA
PALAAGNCVVIKPSEITPLTALKLAVLAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAI
KRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDESTELG
PLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWAN
DSRYGLASSVWTQDVGRAHRLSARLQYGCTWINTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTLVRHIMVKH

Specific function: Catalyzes the oxidation of 1-pyrroline, which is spontaneously formed from 4-aminobutanal, leading to 4- aminobutanoate (GABA) [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family. Gamma- aminobutyraldehyde dehydrogenase subfamily [H]

Homologues:

Organism=Homo sapiens, GI12007648, Length=462, Percent_Identity=37.8787878787879, Blast_Score=331, Evalue=9e-91,
Organism=Homo sapiens, GI25777724, Length=479, Percent_Identity=37.3695198329854, Blast_Score=321, Evalue=8e-88,
Organism=Homo sapiens, GI21614513, Length=488, Percent_Identity=37.9098360655738, Blast_Score=311, Evalue=9e-85,
Organism=Homo sapiens, GI25777732, Length=479, Percent_Identity=37.5782881002088, Blast_Score=310, Evalue=2e-84,
Organism=Homo sapiens, GI238814322, Length=485, Percent_Identity=36.9072164948454, Blast_Score=305, Evalue=5e-83,
Organism=Homo sapiens, GI25777730, Length=478, Percent_Identity=35.9832635983264, Blast_Score=303, Evalue=2e-82,
Organism=Homo sapiens, GI21361176, Length=483, Percent_Identity=36.0248447204969, Blast_Score=301, Evalue=9e-82,
Organism=Homo sapiens, GI153266822, Length=464, Percent_Identity=36.2068965517241, Blast_Score=300, Evalue=2e-81,
Organism=Homo sapiens, GI115387104, Length=465, Percent_Identity=37.2043010752688, Blast_Score=299, Evalue=4e-81,
Organism=Homo sapiens, GI25777728, Length=416, Percent_Identity=37.0192307692308, Blast_Score=287, Evalue=1e-77,
Organism=Homo sapiens, GI25952152, Length=454, Percent_Identity=34.8017621145374, Blast_Score=283, Evalue=3e-76,
Organism=Homo sapiens, GI25777726, Length=477, Percent_Identity=34.8008385744235, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI4507229, Length=455, Percent_Identity=34.7252747252747, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI25777721, Length=468, Percent_Identity=33.3333333333333, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI301500698, Length=285, Percent_Identity=36.140350877193, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI188035924, Length=449, Percent_Identity=28.2850779510022, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI310128103, Length=449, Percent_Identity=28.2850779510022, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI310128093, Length=449, Percent_Identity=28.0623608017817, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI310128091, Length=449, Percent_Identity=27.1714922048998, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI11095441, Length=485, Percent_Identity=27.2164948453608, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI238859541, Length=443, Percent_Identity=27.313769751693, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI25777736, Length=443, Percent_Identity=27.313769751693, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI25777734, Length=443, Percent_Identity=27.313769751693, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI71773324, Length=345, Percent_Identity=29.2753623188406, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI4502043, Length=345, Percent_Identity=29.2753623188406, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI238814371, Length=345, Percent_Identity=29.2753623188406, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI73695881, Length=349, Percent_Identity=28.6532951289398, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI73695879, Length=349, Percent_Identity=28.6532951289398, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI4557303, Length=343, Percent_Identity=28.8629737609329, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI73466520, Length=343, Percent_Identity=28.8629737609329, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI310128089, Length=313, Percent_Identity=29.073482428115, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI206597441, Length=348, Percent_Identity=29.0229885057471, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI206597439, Length=348, Percent_Identity=29.0229885057471, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI22907049, Length=348, Percent_Identity=29.0229885057471, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI223972651, Length=463, Percent_Identity=28.5097192224622, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI310128097, Length=244, Percent_Identity=30.7377049180328, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI310128087, Length=449, Percent_Identity=24.9443207126949, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI310128095, Length=300, Percent_Identity=28, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI223972653, Length=463, Percent_Identity=26.3498920086393, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI310128101, Length=223, Percent_Identity=26.457399103139, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI310128099, Length=223, Percent_Identity=26.457399103139, Blast_Score=84, Evalue=4e-16,
Organism=Escherichia coli, GI1787715, Length=474, Percent_Identity=83.5443037974684, Blast_Score=813, Evalue=0.0,
Organism=Escherichia coli, GI87081896, Length=485, Percent_Identity=39.3814432989691, Blast_Score=335, Evalue=4e-93,
Organism=Escherichia coli, GI1787558, Length=478, Percent_Identity=37.0292887029289, Blast_Score=309, Evalue=3e-85,
Organism=Escherichia coli, GI1787684, Length=468, Percent_Identity=38.4615384615385, Blast_Score=305, Evalue=6e-84,
Organism=Escherichia coli, GI1786504, Length=481, Percent_Identity=38.4615384615385, Blast_Score=297, Evalue=8e-82,
Organism=Escherichia coli, GI1789015, Length=481, Percent_Identity=37.8378378378378, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI87082295, Length=485, Percent_Identity=34.639175257732, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI87081926, Length=449, Percent_Identity=30.5122494432071, Blast_Score=215, Evalue=5e-57,
Organism=Escherichia coli, GI1787250, Length=455, Percent_Identity=30.1098901098901, Blast_Score=165, Evalue=7e-42,
Organism=Escherichia coli, GI1788042, Length=465, Percent_Identity=28.6021505376344, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1787653, Length=307, Percent_Identity=25.7328990228013, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI133930964, Length=481, Percent_Identity=39.5010395010395, Blast_Score=333, Evalue=1e-91,
Organism=Caenorhabditis elegans, GI17562198, Length=480, Percent_Identity=37.0833333333333, Blast_Score=322, Evalue=4e-88,
Organism=Caenorhabditis elegans, GI25144435, Length=483, Percent_Identity=36.4389233954451, Blast_Score=307, Evalue=8e-84,
Organism=Caenorhabditis elegans, GI32564736, Length=417, Percent_Identity=36.6906474820144, Blast_Score=276, Evalue=1e-74,
Organism=Caenorhabditis elegans, GI71995606, Length=471, Percent_Identity=37.791932059448, Blast_Score=275, Evalue=5e-74,
Organism=Caenorhabditis elegans, GI17551164, Length=450, Percent_Identity=36.2222222222222, Blast_Score=269, Evalue=3e-72,
Organism=Caenorhabditis elegans, GI25143876, Length=479, Percent_Identity=34.2379958246347, Blast_Score=264, Evalue=6e-71,
Organism=Caenorhabditis elegans, GI25143874, Length=479, Percent_Identity=34.2379958246347, Blast_Score=264, Evalue=8e-71,
Organism=Caenorhabditis elegans, GI71995613, Length=410, Percent_Identity=38.0487804878049, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17534119, Length=456, Percent_Identity=34.4298245614035, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI115534176, Length=444, Percent_Identity=27.2522522522523, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI71986308, Length=466, Percent_Identity=28.5407725321888, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17534447, Length=448, Percent_Identity=30.5803571428571, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17564084, Length=434, Percent_Identity=25.8064516129032, Blast_Score=147, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI32564151, Length=421, Percent_Identity=30.8788598574822, Blast_Score=147, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI25146391, Length=425, Percent_Identity=27.2941176470588, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI25146394, Length=425, Percent_Identity=27.2941176470588, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI32566756, Length=425, Percent_Identity=27.2941176470588, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI115532534, Length=380, Percent_Identity=30.5263157894737, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71990744, Length=299, Percent_Identity=31.438127090301, Blast_Score=100, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6320917, Length=471, Percent_Identity=39.0658174097665, Blast_Score=337, Evalue=2e-93,
Organism=Saccharomyces cerevisiae, GI6324950, Length=473, Percent_Identity=38.4778012684989, Blast_Score=333, Evalue=3e-92,
Organism=Saccharomyces cerevisiae, GI6323822, Length=478, Percent_Identity=37.2384937238494, Blast_Score=306, Evalue=4e-84,
Organism=Saccharomyces cerevisiae, GI6323821, Length=481, Percent_Identity=36.5904365904366, Blast_Score=297, Evalue=3e-81,
Organism=Saccharomyces cerevisiae, GI6325196, Length=475, Percent_Identity=34.1052631578947, Blast_Score=285, Evalue=8e-78,
Organism=Saccharomyces cerevisiae, GI6319478, Length=470, Percent_Identity=33.8297872340426, Blast_Score=254, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6321828, Length=456, Percent_Identity=28.2894736842105, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6321826, Length=487, Percent_Identity=24.8459958932238, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6323757, Length=315, Percent_Identity=26.031746031746, Blast_Score=80, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24585660, Length=495, Percent_Identity=36.969696969697, Blast_Score=327, Evalue=9e-90,
Organism=Drosophila melanogaster, GI20129399, Length=484, Percent_Identity=37.1900826446281, Blast_Score=315, Evalue=3e-86,
Organism=Drosophila melanogaster, GI24650465, Length=478, Percent_Identity=36.6108786610879, Blast_Score=313, Evalue=1e-85,
Organism=Drosophila melanogaster, GI281362580, Length=477, Percent_Identity=36.0587002096436, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI62472918, Length=477, Percent_Identity=36.0587002096436, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI62472926, Length=477, Percent_Identity=36.0587002096436, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI62472936, Length=477, Percent_Identity=36.0587002096436, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI21356737, Length=477, Percent_Identity=36.0587002096436, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI24666674, Length=472, Percent_Identity=27.1186440677966, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI24638878, Length=475, Percent_Identity=27.5789473684211, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24638876, Length=475, Percent_Identity=27.5789473684211, Blast_Score=152, Evalue=7e-37,
Organism=Drosophila melanogaster, GI24668425, Length=326, Percent_Identity=26.6871165644172, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24668417, Length=326, Percent_Identity=26.6871165644172, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24668413, Length=326, Percent_Identity=26.6871165644172, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281360299, Length=338, Percent_Identity=27.2189349112426, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281360297, Length=338, Percent_Identity=27.2189349112426, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281360295, Length=338, Percent_Identity=27.2189349112426, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24586250, Length=338, Percent_Identity=27.2189349112426, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281360301, Length=338, Percent_Identity=27.2189349112426, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI45552499, Length=338, Percent_Identity=26.9230769230769, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281360303, Length=338, Percent_Identity=26.9230769230769, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI28574525, Length=445, Percent_Identity=23.5955056179775, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281360293, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28571806, Length=297, Percent_Identity=26.2626262626263, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571802, Length=297, Percent_Identity=26.2626262626263, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571800, Length=297, Percent_Identity=26.2626262626263, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571798, Length=297, Percent_Identity=26.2626262626263, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571796, Length=297, Percent_Identity=26.2626262626263, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571794, Length=297, Percent_Identity=26.2626262626263, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017749
- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.19 [H]

Molecular weight: Translated: 51192; Mature: 51192

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYQLLINGVLVDGEGERQSVYNPATGEVILEIAEASPAQVDAAVQAADNAFAEWGQTTP
CCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCH
KARAECLLKLADSIEQNALEFARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
LAAGEYLEGHTSMIRRDPIGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLT
HHCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHH
ALKLAVLAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAI
HHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH
KRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKL
HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
GNAVSSLKMGAPEDESTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYF
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEE
APTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWANDSRYGLASSVWTQDVGRAHR
CCHHHHCCCHHHHHHHHHHCCCEEEEEEECCCHHHHEECCCCCCCCHHHHHHHHHHHHHH
LSARLQYGCTWINTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTLVRHIMVKH
HHHHHHHCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MQYQLLINGVLVDGEGERQSVYNPATGEVILEIAEASPAQVDAAVQAADNAFAEWGQTTP
CCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCH
KARAECLLKLADSIEQNALEFARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
LAAGEYLEGHTSMIRRDPIGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLT
HHCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHH
ALKLAVLAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAI
HHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH
KRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKL
HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
GNAVSSLKMGAPEDESTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYF
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEE
APTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWANDSRYGLASSVWTQDVGRAHR
CCHHHHCCCHHHHHHHHHHCCCEEEEEEECCCHHHHEECCCCCCCCHHHHHHHHHHHHHH
LSARLQYGCTWINTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTLVRHIMVKH
HHHHHHHCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA