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The map label for this gene is yicC [C]

Identifier: 161350015

GI number: 161350015

Start: 489320

End: 490183

Strand: Reverse

Name: yicC [C]

Synonym: HI0467

Alternate gene names: 161350015

Gene position: 490183-489320 (Counterclockwise)

Preceding gene: 16272425

Following gene: 16272414

Centisome position: 26.78

GC content: 39.58

Gene sequence:

>864_bases
ATGATTTACAGTATGACTGCCTTTGCACGCCTTGAAGTGAAAAAAGATTGGGGTGATGCGGTATGGGAAATTCGTTCCGT
TAATCAACGTTATTTAGAAAACTTTTTCCGTTTGCCCGAGCAATTTCGCGGATTAGAAAACACGTTGCGTGAGAAACTTC
GTCAAAATCTTACTCGCGGTAAAATTGAATGTTCTCTACGCATTGAAACAAAAAAACAAGCAAATGCAGAATTGAATTTA
AATAAAGAACTTGCGAATCAAGTAATTCAATCTTTGCAATGGATTAAAGCTCAGGCTGGAGAAGGGGAAATTAATTTGAC
AGACGTGTTGCGTTACCCCGGCGTAGTGGAAGCGCAAGAGCAAGATTTAGATGCGATTAGTCAAGATTTATTGACAGCCT
TTGATGATTTACTGACAGATTTTATTGCAATGCGTGGTCGTGAGGGGGAAAAACTGAACGATATTATTCAACAACGTTTA
GATTCCATTGCAGTGGAAACGGATAAAGTGCGGTCACAAATGCCAGCAGTTTTACAATGGCAGCGTGAACGTTTATTGCA
ACGTTTTGAAGATGCTCAACTTAATCTTGATCCGCAACGTGTGGAACAAGAAATGATTTTACTCGCTCAACGCATTGATG
TGGCGGAAGAGCTAGATCGTTTACAAATGCACGTGAAAGAAACCACGAATATTTTGAAAAAAGGCGGTGCAGTTGGACGT
AAATTAGATTTTATGATGCAAGAATTGAATCGGGAATCCAATACCCTTGCGTCTAAATCCATTAATGCAGATATCACGGC
TTCTGCGGTGGAGCTAAAAGTGCTTATTGAACAAATGCGTGAGCAAATTCAGAATTTAGAATAG

Upstream 100 bases:

>100_bases
GATTTTTATTGTGTTAATTTTCTTTTCCCTTTCTGTGTTCATCTCGTTACAATACTTAGCGAATCAACTAAGACAAAGCT
AAGAGAAAATAGGAGAGCTT

Downstream 100 bases:

>100_bases
GAAAACAGAATGTCTCAATTTATTTCTCTTACTCAATATCAGCTGATTGAAGTACAGGGTGCGGATGCAGAAAAATATTT
GCAAGGGCAATTAACTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIYSMTAFARLEVKKDWGDAVWEIRSVNQRYLENFFRLPEQFRGLENTLREKLRQNLTRGKIECSLRIETKKQANAELNL
NKELANQVIQSLQWIKAQAGEGEINLTDVLRYPGVVEAQEQDLDAISQDLLTAFDDLLTDFIAMRGREGEKLNDIIQQRL
DSIAVETDKVRSQMPAVLQWQRERLLQRFEDAQLNLDPQRVEQEMILLAQRIDVAEELDRLQMHVKETTNILKKGGAVGR
KLDFMMQELNRESNTLASKSINADITASAVELKVLIEQMREQIQNLE

Sequences:

>Translated_287_residues
MIYSMTAFARLEVKKDWGDAVWEIRSVNQRYLENFFRLPEQFRGLENTLREKLRQNLTRGKIECSLRIETKKQANAELNL
NKELANQVIQSLQWIKAQAGEGEINLTDVLRYPGVVEAQEQDLDAISQDLLTAFDDLLTDFIAMRGREGEKLNDIIQQRL
DSIAVETDKVRSQMPAVLQWQRERLLQRFEDAQLNLDPQRVEQEMILLAQRIDVAEELDRLQMHVKETTNILKKGGAVGR
KLDFMMQELNRESNTLASKSINADITASAVELKVLIEQMREQIQNLE
>Mature_287_residues
MIYSMTAFARLEVKKDWGDAVWEIRSVNQRYLENFFRLPEQFRGLENTLREKLRQNLTRGKIECSLRIETKKQANAELNL
NKELANQVIQSLQWIKAQAGEGEINLTDVLRYPGVVEAQEQDLDAISQDLLTAFDDLLTDFIAMRGREGEKLNDIIQQRL
DSIAVETDKVRSQMPAVLQWQRERLLQRFEDAQLNLDPQRVEQEMILLAQRIDVAEELDRLQMHVKETTNILKKGGAVGR
KLDFMMQELNRESNTLASKSINADITASAVELKVLIEQMREQIQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=64.808362369338, Blast_Score=372, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y467_HAEIN (P44726)

Other databases:

- EMBL:   L42023
- PIR:   C64153
- RefSeq:   NP_438628.3
- GeneID:   949553
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0467
- NMPDR:   fig|71421.1.peg.441
- TIGR:   HI_0467
- HOGENOM:   HBG476761
- OMA:   WELKSVN
- ProtClustDB:   PRK11820
- BioCyc:   HINF71421:HI_0467-MONOMER
- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527
- TIGRFAMs:   TIGR00255

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N

EC number: NA

Molecular weight: Translated: 33271; Mature: 33271

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSMTAFARLEVKKDWGDAVWEIRSVNQRYLENFFRLPEQFRGLENTLREKLRQNLTRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KIECSLRIETKKQANAELNLNKELANQVIQSLQWIKAQAGEGEINLTDVLRYPGVVEAQE
CEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCH
QDLDAISQDLLTAFDDLLTDFIAMRGREGEKLNDIIQQRLDSIAVETDKVRSQMPAVLQW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QRERLLQRFEDAQLNLDPQRVEQEMILLAQRIDVAEELDRLQMHVKETTNILKKGGAVGR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLDFMMQELNRESNTLASKSINADITASAVELKVLIEQMREQIQNLE
HHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIYSMTAFARLEVKKDWGDAVWEIRSVNQRYLENFFRLPEQFRGLENTLREKLRQNLTRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KIECSLRIETKKQANAELNLNKELANQVIQSLQWIKAQAGEGEINLTDVLRYPGVVEAQE
CEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCH
QDLDAISQDLLTAFDDLLTDFIAMRGREGEKLNDIIQQRLDSIAVETDKVRSQMPAVLQW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QRERLLQRFEDAQLNLDPQRVEQEMILLAQRIDVAEELDRLQMHVKETTNILKKGGAVGR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLDFMMQELNRESNTLASKSINADITASAVELKVLIEQMREQIQNLE
HHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023