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The map label for this gene is secA

Identifier: 161347548

GI number: 161347548

Start: 1630637

End: 1633162

Strand: Direct

Name: secA

Synonym: SYN_01036

Alternate gene names: 161347548

Gene position: 1630637-1633162 (Clockwise)

Preceding gene: 85859423

Following gene: 85859425

Centisome position: 51.29

GC content: 50.75

Gene sequence:

>2526_bases
ATGTTTGCATCAGTCCTTAAAAAGATCGTAGGTACAAAAAACGACAGGGAACTCAAGAAATATTCTTTAATACAACGTGA
AATCAATGCCTTGGAATCATCCATCGCTGCACTGAGCGATGAGCAGCTCAAGGAAAAAACGCCTTATTTCAAGGAAAAAC
TGCATACCGGAGCCAGTCTGGACGACATTCTGCCCGAAGCCTTTGCCGTCGTCCGTGAAGTCGCCCGGAGAACGGTGAAC
ATGCGTCCCTTTGACGTTCAGCTTATCGGAGGGATGGTGCTTCACGAGGGCAAAATTGCGGAAATGAAGACGGGTGAAGG
AAAGACCCTGGTAGCCACGATGCCCATGTATCTCAACGCGCTGGAAGGGAAGGGCGCCCATCTGGTTACCGTCAACGATT
ACCTGGCCAGTCGTGATGCCGAATGGATGAGCCCGATCTACAGCTTCCTGGGCTTGTCCGTGGGGGTGATCGTACATGGC
ATGGATGATGATGAGCGAAGAGCCGCCTATGCCTGCGATATCACCTACGGCACGAACAACGAGTTCGGATTCGATTACCT
GCGGGACAATATGAAATATTCCCTGGAGGATTATACGCAGCGCGAATTTAATTATTCGATCGTCGACGAAGTGGACAGCA
TCCTTATAGACGAGGCACGGACGCCGCTGATCATTTCCGGTCCGTCTGAAGAATCGACCGATAAATACTATCGGATCAAT
CAGATTATCCCCAGACTGAAGAAGGAAAGGGACTACACTATCGATGAAAAGAGCCGGACCGTCGTCCTGACGGAAGAGGG
AGTTGCGAGGGTTGAGTCCTATCTGAACGTTTCAAACCTGTATGAACCCCGGAATATCGATACCCTCCATCACGTCAATC
AGGCCCTTAAGGCTCATACGCTTTTCAAGCGCGATGTGGATTATCTCGTGAAAGACGGGCAGGTCATTATCGTCGATGAA
TTCACCGGACGGATCATGCCCGGCAGACGGTACAGCGATGGTCTGCACCAGGCCCTGGAAGCCAAGGAAAAGGTCAAAAT
TGAACAGGAAAACCAGACGCTGGCCTCCATCACGTTCCAGAATTTCTTCCGGATGTACTCCAAACTGGCCGGCATGACAG
GTACAGCCGACACCGAGGCCGCAGAGTTCAAGAAAATCTATAATCTGGATGTGGTCGTGGTGCCGACAAACATGCCGATG
ATCCGGGTGGATCATACCGATGTCATCTACAAGACGGAAAAGGAGAAGTTTTCTGCGGTCATCGAGGAAATCAAGGAACT
GCACAAGGCGAAAAGGCCGGTTCTGGTGGGAACCATTTCCATTGAAAAGTCGGAGCTTCTAAGCAAATACCTGACTCAGA
CAGGCATCCAGCATCACGTTCTGAATGCGAAAAATCATGAAAAGGAGGCGGAAATCGTCTCCCAGGCCGGTCAGCCCGGT
CAGGTGACCATCTCCACGAACATGGCCGGCCGCGGGACAGACATCAAACTGGGCGAAAGGGTGGCGGAACTGGGCGGGTT
GCATATCCTGGGCACGGAGCGGCACGAGAGCCGCCGAATTGACAATCAGCTCCGGGGGCGTTCCGGTCGACAGGGCGATA
TGGGATCTTCCCGGTTTTATCTCTCCTTGGAAGACGATCTCCTGCGAATTTTCGGGGCGGAAAAAATTTCTTCCATCATG
GACAAGATCGGAATTGAAGAGAACCAGCCCATAGAGCATAAACTTATCTCCAGGGCCATCGAAAATGCGCAGAAGCGGGT
TGAAGGGCAGAACTTTGATATCCGCAAGCATCTTCTGGAATATGATGACGTCATGAACCGTCAGCGGCAGGTCATTTACG
AGCAGCGGAGAAATGTGCTCAAAGGTGACGAACTGCGCGAAGACCTTCTGGATATGATTGAAGAAGTTGTTGAAGATTTT
GTTCCGGAATACGTAGATGAAAAGCGTCACCCCGATGAATGGAATCTCAAGGGACTGGAGGACAGGGTCTTAAAGCAATT
TTCCCTGAGGCTGGATTTCAGCAAGTCGGGCGATGTCGGGAGCCTGGAAGATATTCAGGAAAAAATCGTTGCAGCCGTCA
ATGATCTTCTTAACAGAAAAGAAGCGGAATTCGGGAAGCCGCTTATGGATTATCTCATCAGGATGATCAGCATCCAGTCT
ATCGACAGCCACTGGAAGGATCATCTGCTGGCCATGGATCACCTCAAGGAAGGCATTGGTCTGAGGGGATATGGGCAGAA
GGACCCCGTGCGGGAATATCAGAAAGAGGGGTATGACCTCTTTATGGATATGATTCGGCGGATCAAGGAAGACACTCTTG
AAAAACTCTGCATGGTACAGATCCGGCGAGAGGAAGAGGTGGAAGAAATGCGGGAGCAATCCCGGCAGAATTACATCATG
AACCGGGGCGAAGATATTGCAGCGCCGGCGACTGTCAGAAGAAAAAATGAAAAAGTCGGTCGCAACGATCCCTGTCCCTG
TGGCAGCGGGAAAAAATACAAGAAGTGCTGCGGTGCTAATAAATAA

Upstream 100 bases:

>100_bases
ATTATTTTATTCTGAAAAGACTGTCATCCCAGATCCAGGATTTAAACCGGCAGCCCGCAGGCCGGTTTCATCAGAAGAAG
GTTATAGTAAAGGTTATAAT

Downstream 100 bases:

>100_bases
CAATGTCTGACTCAGAAAAACAGACCCGCTCGAAATATGAACAGCTGAAAAACAGGTGAATCACATGAATTCTCATGAAT
ATTATGTCCCCGGTTATCTG

Product: preprotein translocase subunit SecA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 841; Mature: 841

Protein sequence:

>841_residues
MFASVLKKIVGTKNDRELKKYSLIQREINALESSIAALSDEQLKEKTPYFKEKLHTGASLDDILPEAFAVVREVARRTVN
MRPFDVQLIGGMVLHEGKIAEMKTGEGKTLVATMPMYLNALEGKGAHLVTVNDYLASRDAEWMSPIYSFLGLSVGVIVHG
MDDDERRAAYACDITYGTNNEFGFDYLRDNMKYSLEDYTQREFNYSIVDEVDSILIDEARTPLIISGPSEESTDKYYRIN
QIIPRLKKERDYTIDEKSRTVVLTEEGVARVESYLNVSNLYEPRNIDTLHHVNQALKAHTLFKRDVDYLVKDGQVIIVDE
FTGRIMPGRRYSDGLHQALEAKEKVKIEQENQTLASITFQNFFRMYSKLAGMTGTADTEAAEFKKIYNLDVVVVPTNMPM
IRVDHTDVIYKTEKEKFSAVIEEIKELHKAKRPVLVGTISIEKSELLSKYLTQTGIQHHVLNAKNHEKEAEIVSQAGQPG
QVTISTNMAGRGTDIKLGERVAELGGLHILGTERHESRRIDNQLRGRSGRQGDMGSSRFYLSLEDDLLRIFGAEKISSIM
DKIGIEENQPIEHKLISRAIENAQKRVEGQNFDIRKHLLEYDDVMNRQRQVIYEQRRNVLKGDELREDLLDMIEEVVEDF
VPEYVDEKRHPDEWNLKGLEDRVLKQFSLRLDFSKSGDVGSLEDIQEKIVAAVNDLLNRKEAEFGKPLMDYLIRMISIQS
IDSHWKDHLLAMDHLKEGIGLRGYGQKDPVREYQKEGYDLFMDMIRRIKEDTLEKLCMVQIRREEEVEEMREQSRQNYIM
NRGEDIAAPATVRRKNEKVGRNDPCPCGSGKKYKKCCGANK

Sequences:

>Translated_841_residues
MFASVLKKIVGTKNDRELKKYSLIQREINALESSIAALSDEQLKEKTPYFKEKLHTGASLDDILPEAFAVVREVARRTVN
MRPFDVQLIGGMVLHEGKIAEMKTGEGKTLVATMPMYLNALEGKGAHLVTVNDYLASRDAEWMSPIYSFLGLSVGVIVHG
MDDDERRAAYACDITYGTNNEFGFDYLRDNMKYSLEDYTQREFNYSIVDEVDSILIDEARTPLIISGPSEESTDKYYRIN
QIIPRLKKERDYTIDEKSRTVVLTEEGVARVESYLNVSNLYEPRNIDTLHHVNQALKAHTLFKRDVDYLVKDGQVIIVDE
FTGRIMPGRRYSDGLHQALEAKEKVKIEQENQTLASITFQNFFRMYSKLAGMTGTADTEAAEFKKIYNLDVVVVPTNMPM
IRVDHTDVIYKTEKEKFSAVIEEIKELHKAKRPVLVGTISIEKSELLSKYLTQTGIQHHVLNAKNHEKEAEIVSQAGQPG
QVTISTNMAGRGTDIKLGERVAELGGLHILGTERHESRRIDNQLRGRSGRQGDMGSSRFYLSLEDDLLRIFGAEKISSIM
DKIGIEENQPIEHKLISRAIENAQKRVEGQNFDIRKHLLEYDDVMNRQRQVIYEQRRNVLKGDELREDLLDMIEEVVEDF
VPEYVDEKRHPDEWNLKGLEDRVLKQFSLRLDFSKSGDVGSLEDIQEKIVAAVNDLLNRKEAEFGKPLMDYLIRMISIQS
IDSHWKDHLLAMDHLKEGIGLRGYGQKDPVREYQKEGYDLFMDMIRRIKEDTLEKLCMVQIRREEEVEEMREQSRQNYIM
NRGEDIAAPATVRRKNEKVGRNDPCPCGSGKKYKKCCGANK
>Mature_841_residues
MFASVLKKIVGTKNDRELKKYSLIQREINALESSIAALSDEQLKEKTPYFKEKLHTGASLDDILPEAFAVVREVARRTVN
MRPFDVQLIGGMVLHEGKIAEMKTGEGKTLVATMPMYLNALEGKGAHLVTVNDYLASRDAEWMSPIYSFLGLSVGVIVHG
MDDDERRAAYACDITYGTNNEFGFDYLRDNMKYSLEDYTQREFNYSIVDEVDSILIDEARTPLIISGPSEESTDKYYRIN
QIIPRLKKERDYTIDEKSRTVVLTEEGVARVESYLNVSNLYEPRNIDTLHHVNQALKAHTLFKRDVDYLVKDGQVIIVDE
FTGRIMPGRRYSDGLHQALEAKEKVKIEQENQTLASITFQNFFRMYSKLAGMTGTADTEAAEFKKIYNLDVVVVPTNMPM
IRVDHTDVIYKTEKEKFSAVIEEIKELHKAKRPVLVGTISIEKSELLSKYLTQTGIQHHVLNAKNHEKEAEIVSQAGQPG
QVTISTNMAGRGTDIKLGERVAELGGLHILGTERHESRRIDNQLRGRSGRQGDMGSSRFYLSLEDDLLRIFGAEKISSIM
DKIGIEENQPIEHKLISRAIENAQKRVEGQNFDIRKHLLEYDDVMNRQRQVIYEQRRNVLKGDELREDLLDMIEEVVEDF
VPEYVDEKRHPDEWNLKGLEDRVLKQFSLRLDFSKSGDVGSLEDIQEKIVAAVNDLLNRKEAEFGKPLMDYLIRMISIQS
IDSHWKDHLLAMDHLKEGIGLRGYGQKDPVREYQKEGYDLFMDMIRRIKEDTLEKLCMVQIRREEEVEEMREQSRQNYIM
NRGEDIAAPATVRRKNEKVGRNDPCPCGSGKKYKKCCGANK

Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity)

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secA family

Homologues:

Organism=Escherichia coli, GI1786287, Length=898, Percent_Identity=53.1180400890869, Blast_Score=928, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECA_SYNAS (Q2LTP4)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_461626.2
- ProteinModelPortal:   Q2LTP4
- SMR:   Q2LTP4
- STRING:   Q2LTP4
- GeneID:   3884410
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_01036
- NMPDR:   fig|56780.10.peg.1570
- eggNOG:   COG0653
- HOGENOM:   HBG284200
- ProtClustDB:   PRK12904
- BioCyc:   SACI56780:SYN_01036-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01382
- InterPro:   IPR001650
- InterPro:   IPR004027
- InterPro:   IPR000185
- InterPro:   IPR020937
- InterPro:   IPR011115
- InterPro:   IPR014018
- InterPro:   IPR011130
- InterPro:   IPR011116
- Gene3D:   G3DSA:1.10.3060.10
- PRINTS:   PR00906
- SMART:   SM00957
- SMART:   SM00958
- TIGRFAMs:   TIGR00963

Pfam domain/function: PF00271 Helicase_C; PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW; SSF81767 SecA_PP_bd; SSF81886 SecA_SW

EC number: NA

Molecular weight: Translated: 96488; Mature: 96488

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS01312 SECA; PS51196 SECA_MOTOR_DEAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASVLKKIVGTKNDRELKKYSLIQREINALESSIAALSDEQLKEKTPYFKEKLHTGASL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH
DDILPEAFAVVREVARRTVNMRPFDVQLIGGMVLHEGKIAEMKTGEGKTLVATMPMYLNA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEECCCEEEEECCCCCEEEEEHHHHHHH
LEGKGAHLVTVNDYLASRDAEWMSPIYSFLGLSVGVIVHGMDDDERRAAYACDITYGTNN
HCCCCCEEEEEHHHHHCCCHHHHHHHHHHHCCHHHHEEECCCCCCCCEEEEEEEEECCCC
EFGFDYLRDNMKYSLEDYTQREFNYSIVDEVDSILIDEARTPLIISGPSEESTDKYYRIN
CCCHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH
QIIPRLKKERDYTIDEKSRTVVLTEEGVARVESYLNVSNLYEPRNIDTLHHVNQALKAHT
HHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LFKRDVDYLVKDGQVIIVDEFTGRIMPGRRYSDGLHQALEAKEKVKIEQENQTLASITFQ
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCHHHHHHHH
NFFRMYSKLAGMTGTADTEAAEFKKIYNLDVVVVPTNMPMIRVDHTDVIYKTEKEKFSAV
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCCEEEECCCCEEEECHHHHHHHH
IEEIKELHKAKRPVLVGTISIEKSELLSKYLTQTGIQHHVLNAKNHEKEAEIVSQAGQPG
HHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCCCC
QVTISTNMAGRGTDIKLGERVAELGGLHILGTERHESRRIDNQLRGRSGRQGDMGSSRFY
EEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEE
LSLEDDLLRIFGAEKISSIMDKIGIEENQPIEHKLISRAIENAQKRVEGQNFDIRKHLLE
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
YDDVMNRQRQVIYEQRRNVLKGDELREDLLDMIEEVVEDFVPEYVDEKRHPDEWNLKGLE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DRVLKQFSLRLDFSKSGDVGSLEDIQEKIVAAVNDLLNRKEAEFGKPLMDYLIRMISIQS
HHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDSHWKDHLLAMDHLKEGIGLRGYGQKDPVREYQKEGYDLFMDMIRRIKEDTLEKLCMVQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IRREEEVEEMREQSRQNYIMNRGEDIAAPATVRRKNEKVGRNDPCPCGSGKKYKKCCGAN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCHHHHHCCCC
K
C
>Mature Secondary Structure
MFASVLKKIVGTKNDRELKKYSLIQREINALESSIAALSDEQLKEKTPYFKEKLHTGASL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH
DDILPEAFAVVREVARRTVNMRPFDVQLIGGMVLHEGKIAEMKTGEGKTLVATMPMYLNA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEECCCEEEEECCCCCEEEEEHHHHHHH
LEGKGAHLVTVNDYLASRDAEWMSPIYSFLGLSVGVIVHGMDDDERRAAYACDITYGTNN
HCCCCCEEEEEHHHHHCCCHHHHHHHHHHHCCHHHHEEECCCCCCCCEEEEEEEEECCCC
EFGFDYLRDNMKYSLEDYTQREFNYSIVDEVDSILIDEARTPLIISGPSEESTDKYYRIN
CCCHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH
QIIPRLKKERDYTIDEKSRTVVLTEEGVARVESYLNVSNLYEPRNIDTLHHVNQALKAHT
HHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LFKRDVDYLVKDGQVIIVDEFTGRIMPGRRYSDGLHQALEAKEKVKIEQENQTLASITFQ
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCHHHHHHHH
NFFRMYSKLAGMTGTADTEAAEFKKIYNLDVVVVPTNMPMIRVDHTDVIYKTEKEKFSAV
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCCEEEECCCCEEEECHHHHHHHH
IEEIKELHKAKRPVLVGTISIEKSELLSKYLTQTGIQHHVLNAKNHEKEAEIVSQAGQPG
HHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCCCC
QVTISTNMAGRGTDIKLGERVAELGGLHILGTERHESRRIDNQLRGRSGRQGDMGSSRFY
EEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEE
LSLEDDLLRIFGAEKISSIMDKIGIEENQPIEHKLISRAIENAQKRVEGQNFDIRKHLLE
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
YDDVMNRQRQVIYEQRRNVLKGDELREDLLDMIEEVVEDFVPEYVDEKRHPDEWNLKGLE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DRVLKQFSLRLDFSKSGDVGSLEDIQEKIVAAVNDLLNRKEAEFGKPLMDYLIRMISIQS
HHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDSHWKDHLLAMDHLKEGIGLRGYGQKDPVREYQKEGYDLFMDMIRRIKEDTLEKLCMVQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IRREEEVEEMREQSRQNYIMNRGEDIAAPATVRRKNEKVGRNDPCPCGSGKKYKKCCGAN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCHHHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA