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The map label for this gene is vacJ [C]

Identifier: 16127922

GI number: 16127922

Start: 3945156

End: 3946016

Strand: Direct

Name: vacJ [C]

Synonym: CC_3692

Alternate gene names: 16127922

Gene position: 3945156-3946016 (Clockwise)

Preceding gene: 16127919

Following gene: 16127923

Centisome position: 98.21

GC content: 68.87

Gene sequence:

>861_bases
ATGGCGCCTATGAGAAGCAGGAGCATCCGCTTGCGCGACCGGCATCAAAGCGCGCGCCCACAAGGGTTCCGACGTCACCT
CGCCGTCGGCGCCCTGGCGGCCGCCGGCCTTCTGGCTGCGGCGTCGAACGCGCAGGCGCAAGCCGAGCCTGCGCCGCTCG
CTTCGGCCGGTCCGGCCGCCAATGACCCCCTGGAGGGCTTCAACCGGGCCTCGTTCAAGCTCGGCATGGGACTGGACCGT
GCGCTGCTGGCGCCGATCACCCACGGCTATATGGCGGTGACGCCGCGCGTCGTCCGCGACCGGGTCAGCTTGGTCATCTA
CAATATGGGCGAGCCGAACACGGTGATGAACCAGGTTCTTCAAGGCAAGCCGCGTCAGGCCGTGCGCTCGAGCACCCGTT
TCGTGGTCAACTCCACGGTCGGCGTGGCGGGCCTGTTCGACGTCGCCGCCAAGATGGGCCTGCCGCCGCGCGGCGCCGAT
TTCGGCCAGACCTTCGGCCGCTGGGGCGCAGGCCCCGGAGCCTATATCTACGTGCCCCTGATGGGCCCCCTGAACGTTCG
CGACGGCGTCGGCCGCGCGCTCGATATCGTCACTGACCCGGTCTCGCTGTTCGTGGGCGGCTTGGACACCGACTTCGGTC
GGGCCCGCACGGCGATCACCGTGGTCGACCTGCGCGCCACGACAGACTCCGCATACGAAGCTCTGAAGGACGCGTCCGAC
CCCTACGTCACCACCCGCTCCGCCTATGCGCAGTATCGGGAGGCCTTCGTCCGCGAAGCCACCGGCGAGAGCGAAGCGCT
CCCTGATTTCGACGCGCCGCCGTCCGAACCGAACACCTCATCGGCGACGCCCAATCCATGA

Upstream 100 bases:

>100_bases
CGTGACTGAGTCGCGCGACGCCCAGGCGATTTGCGCTCAGGCGTTCAAGCGTAAGCGAAATAGTCGGCCTTAATCTTGAT
ACGGAGGGCGTCGTGAATAC

Downstream 100 bases:

>100_bases
CCCTCCCCGGTAACACTATGCGAAACACCTCCATCACCCGCCGCGGCGCAAGCGTCGCGGCTTTGGCGTTCTTCGGCGCC
GCGCTTTCCGCCGCCTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MAPMRSRSIRLRDRHQSARPQGFRRHLAVGALAAAGLLAAASNAQAQAEPAPLASAGPAANDPLEGFNRASFKLGMGLDR
ALLAPITHGYMAVTPRVVRDRVSLVIYNMGEPNTVMNQVLQGKPRQAVRSSTRFVVNSTVGVAGLFDVAAKMGLPPRGAD
FGQTFGRWGAGPGAYIYVPLMGPLNVRDGVGRALDIVTDPVSLFVGGLDTDFGRARTAITVVDLRATTDSAYEALKDASD
PYVTTRSAYAQYREAFVREATGESEALPDFDAPPSEPNTSSATPNP

Sequences:

>Translated_286_residues
MAPMRSRSIRLRDRHQSARPQGFRRHLAVGALAAAGLLAAASNAQAQAEPAPLASAGPAANDPLEGFNRASFKLGMGLDR
ALLAPITHGYMAVTPRVVRDRVSLVIYNMGEPNTVMNQVLQGKPRQAVRSSTRFVVNSTVGVAGLFDVAAKMGLPPRGAD
FGQTFGRWGAGPGAYIYVPLMGPLNVRDGVGRALDIVTDPVSLFVGGLDTDFGRARTAITVVDLRATTDSAYEALKDASD
PYVTTRSAYAQYREAFVREATGESEALPDFDAPPSEPNTSSATPNP
>Mature_285_residues
APMRSRSIRLRDRHQSARPQGFRRHLAVGALAAAGLLAAASNAQAQAEPAPLASAGPAANDPLEGFNRASFKLGMGLDRA
LLAPITHGYMAVTPRVVRDRVSLVIYNMGEPNTVMNQVLQGKPRQAVRSSTRFVVNSTVGVAGLFDVAAKMGLPPRGADF
GQTFGRWGAGPGAYIYVPLMGPLNVRDGVGRALDIVTDPVSLFVGGLDTDFGRARTAITVVDLRATTDSAYEALKDASDP
YVTTRSAYAQYREAFVREATGESEALPDFDAPPSEPNTSSATPNP

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=235, Percent_Identity=27.6595744680851, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 30297; Mature: 30165

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPMRSRSIRLRDRHQSARPQGFRRHLAVGALAAAGLLAAASNAQAQAEPAPLASAGPAA
CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
NDPLEGFNRASFKLGMGLDRALLAPITHGYMAVTPRVVRDRVSLVIYNMGEPNTVMNQVL
CCCHHHCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHCEEEEEEECCCCHHHHHHHH
QGKPRQAVRSSTRFVVNSTVGVAGLFDVAAKMGLPPRGADFGQTFGRWGAGPGAYIYVPL
CCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEC
MGPLNVRDGVGRALDIVTDPVSLFVGGLDTDFGRARTAITVVDLRATTDSAYEALKDASD
CCCCCCCCCCCHHHHHHHCHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCC
PYVTTRSAYAQYREAFVREATGESEALPDFDAPPSEPNTSSATPNP
CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
APMRSRSIRLRDRHQSARPQGFRRHLAVGALAAAGLLAAASNAQAQAEPAPLASAGPAA
CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
NDPLEGFNRASFKLGMGLDRALLAPITHGYMAVTPRVVRDRVSLVIYNMGEPNTVMNQVL
CCCHHHCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHCEEEEEEECCCCHHHHHHHH
QGKPRQAVRSSTRFVVNSTVGVAGLFDVAAKMGLPPRGADFGQTFGRWGAGPGAYIYVPL
CCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEC
MGPLNVRDGVGRALDIVTDPVSLFVGGLDTDFGRARTAITVVDLRATTDSAYEALKDASD
CCCCCCCCCCCHHHHHHHCHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCC
PYVTTRSAYAQYREAFVREATGESEALPDFDAPPSEPNTSSATPNP
CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA