| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is citZ [H]
Identifier: 16127873
GI number: 16127873
Start: 3902161
End: 3903327
Strand: Direct
Name: citZ [H]
Synonym: CC_3643
Alternate gene names: 16127873
Gene position: 3902161-3903327 (Clockwise)
Preceding gene: 16127867
Following gene: 16127875
Centisome position: 97.14
GC content: 73.44
Gene sequence:
>1167_bases ATGGACGCAGAGCAGGTTCTGGAGCGACTGGGGATCCGGCCGCAGACGCTCTACGCCTATGTCAGCCGCGGGCGGATCGA AGCGGCGGCGCACCCCAGCGACCCTCGCCGCAGCCTCTATCGCGCCTCGGACGTCACGGCCCTGGCCCGTAAAAAGGCGC GGGGCCGACGGGTCGCGGACGTCGCCGCCGAGGCGATCGCCTGGGGTGAGCCGGTGCTGCCCTCGGCCATCACGACCGTG AGCGGTGGCAAGCTCTGGTATCGCGGCGAGGACGCGGCGGGTCTCGCCGACCAGGGCCTGACGCTCGAGAATGTCGCGCG CCTGCTACGCGGCGGTCACGGGGCGGCGCTGAAGGCGTCAAGCCGGCCGCCGCCGCCCGCGACGGACAGCGCGCGGTCGC GCATGTTCCTGACCCTGGCTGAACGCGCGGGGCGGGAGCCCCCCGCCCGCGGCCGCGCCCCGCTGGCCCTGGCCATGGAG GCCGCCGACCTGCTGGATGCGATCGTCGACGCCGCGACCGGCCAGGCGGGCGACGGACCTGCTCACCAGCGCTTCGCCCA TGCCTGGAACCTGACCGCGGACGGCGCCGACCTGGTCCGGCGCGCGCTGGTGCTGATGGCCGATCACGAGCTGAACGCCT CGACCTTTGCGGCGCGCGTGGCCGCCTCGACCGGCGCATCACTTTCGGCGGCCTGTCTGGCGGGCCTGTCGGCGCTGTCT GGGCCTTTGCACGGCGGCATGGCGGCGCGGGTCGAGGCCCTTGTCGAAGAAGCTGATCGACGGGACGCCGCCCGCGCCGT CTCCTCGCGCCTTGAGCAGGGCGCCAGCCTGCCCGGCTTCGACCATCCGCTCTATCCCGGCGGCGATCCGCGCGCTGCGG CATTGCTGGCGAGGTTCGAGCCCCCTGAGCCGTTGACGGCGCTTTGGCAAGCCACCCGGGCGGCGACGGGTCTAGCGCCC AATATCGACTTCGCGCTGGTCGCCCTGGCGCGGGGCCTCGCCCTGCCGCAGGACGCGCCCTTCATCCTCTTCGCCACGGC GCGCAGCGCCGGATGGACCGCCCACGCCATCGAACAGCTACAGACCGGCCGCCTGATCAGGCCTCGCGCCCGCTACATCG GGACCGTACCAAGCGCCGCGGGCTACTCGCCCTCCTCATCCTCATAG
Upstream 100 bases:
>100_bases AGACCATCAGACATGCGCGGTCTCCTTTCGCGGCGAAGGAGCGCCTCACCGTCTTGATGGTCAATCTTGATCAATATAAT CAATCTATATGACCGACTGG
Downstream 100 bases:
>100_bases CCCACCAAGCGCAGGGCTCGAGCCGGTATGCCCTCCAGCTGACACCAGCGCTCCAGGGCCTCCTCGCGCCCGTGGGTGAT CCACACCTCGCCGGGCCTCA
Product: citrate synthase
Products: NA
Alternate protein names: Citrate synthase II [H]
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MDAEQVLERLGIRPQTLYAYVSRGRIEAAAHPSDPRRSLYRASDVTALARKKARGRRVADVAAEAIAWGEPVLPSAITTV SGGKLWYRGEDAAGLADQGLTLENVARLLRGGHGAALKASSRPPPPATDSARSRMFLTLAERAGREPPARGRAPLALAME AADLLDAIVDAATGQAGDGPAHQRFAHAWNLTADGADLVRRALVLMADHELNASTFAARVAASTGASLSAACLAGLSALS GPLHGGMAARVEALVEEADRRDAARAVSSRLEQGASLPGFDHPLYPGGDPRAAALLARFEPPEPLTALWQATRAATGLAP NIDFALVALARGLALPQDAPFILFATARSAGWTAHAIEQLQTGRLIRPRARYIGTVPSAAGYSPSSSS
Sequences:
>Translated_388_residues MDAEQVLERLGIRPQTLYAYVSRGRIEAAAHPSDPRRSLYRASDVTALARKKARGRRVADVAAEAIAWGEPVLPSAITTV SGGKLWYRGEDAAGLADQGLTLENVARLLRGGHGAALKASSRPPPPATDSARSRMFLTLAERAGREPPARGRAPLALAME AADLLDAIVDAATGQAGDGPAHQRFAHAWNLTADGADLVRRALVLMADHELNASTFAARVAASTGASLSAACLAGLSALS GPLHGGMAARVEALVEEADRRDAARAVSSRLEQGASLPGFDHPLYPGGDPRAAALLARFEPPEPLTALWQATRAATGLAP NIDFALVALARGLALPQDAPFILFATARSAGWTAHAIEQLQTGRLIRPRARYIGTVPSAAGYSPSSSS >Mature_388_residues MDAEQVLERLGIRPQTLYAYVSRGRIEAAAHPSDPRRSLYRASDVTALARKKARGRRVADVAAEAIAWGEPVLPSAITTV SGGKLWYRGEDAAGLADQGLTLENVARLLRGGHGAALKASSRPPPPATDSARSRMFLTLAERAGREPPARGRAPLALAME AADLLDAIVDAATGQAGDGPAHQRFAHAWNLTADGADLVRRALVLMADHELNASTFAARVAASTGASLSAACLAGLSALS GPLHGGMAARVEALVEEADRRDAARAVSSRLEQGASLPGFDHPLYPGGDPRAAALLARFEPPEPLTALWQATRAATGLAP NIDFALVALARGLALPQDAPFILFATARSAGWTAHAIEQLQTGRLIRPRARYIGTVPSAAGYSPSSSS
Specific function: Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect [H]
COG id: COG0372
COG function: function code C; Citrate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the citrate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786527, Length=188, Percent_Identity=33.5106382978723, Blast_Score=109, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011278 - InterPro: IPR016142 - InterPro: IPR016143 - InterPro: IPR002020 - InterPro: IPR016141 - InterPro: IPR019810 [H]
Pfam domain/function: PF00285 Citrate_synt [H]
EC number: =2.3.3.1 [H]
Molecular weight: Translated: 40490; Mature: 40490
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAEQVLERLGIRPQTLYAYVSRGRIEAAAHPSDPRRSLYRASDVTALARKKARGRRVAD CCHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH VAAEAIAWGEPVLPSAITTVSGGKLWYRGEDAAGLADQGLTLENVARLLRGGHGAALKAS HHHHHHHCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECC SRPPPPATDSARSRMFLTLAERAGREPPARGRAPLALAMEAADLLDAIVDAATGQAGDGP CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH AHQRFAHAWNLTADGADLVRRALVLMADHELNASTFAARVAASTGASLSAACLAGLSALS HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC GPLHGGMAARVEALVEEADRRDAARAVSSRLEQGASLPGFDHPLYPGGDPRAAALLARFE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC PPEPLTALWQATRAATGLAPNIDFALVALARGLALPQDAPFILFATARSAGWTAHAIEQL CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHH QTGRLIRPRARYIGTVPSAAGYSPSSSS HCCCCCCCHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDAEQVLERLGIRPQTLYAYVSRGRIEAAAHPSDPRRSLYRASDVTALARKKARGRRVAD CCHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH VAAEAIAWGEPVLPSAITTVSGGKLWYRGEDAAGLADQGLTLENVARLLRGGHGAALKAS HHHHHHHCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECC SRPPPPATDSARSRMFLTLAERAGREPPARGRAPLALAMEAADLLDAIVDAATGQAGDGP CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH AHQRFAHAWNLTADGADLVRRALVLMADHELNASTFAARVAASTGASLSAACLAGLSALS HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC GPLHGGMAARVEALVEEADRRDAARAVSSRLEQGASLPGFDHPLYPGGDPRAAALLARFE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC PPEPLTALWQATRAATGLAPNIDFALVALARGLALPQDAPFILFATARSAGWTAHAIEQL CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHH QTGRLIRPRARYIGTVPSAAGYSPSSSS HCCCCCCCHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8045898; 9387221; 9384377 [H]