Click here to switch to the map view.

The map label for this gene is 16127790

Identifier: 16127790

GI number: 16127790

Start: 3808314

End: 3810152

Strand: Direct

Name: 16127790

Synonym: CC_3560

Alternate gene names: NA

Gene position: 3808314-3810152 (Clockwise)

Preceding gene: 16127786

Following gene: 16127791

Centisome position: 94.81

GC content: 70.69

Gene sequence:

>1839_bases
ATGGACGACGCCCCAAGAGCCAGCGACGACCGCCTGGAAGCAGAGCGCCTTGAAGCTGTGCGGGGACTGGGCGTCGTGGA
TGGGATCGTCAACGGCCCCGGGCTGTCTCGCCTAATCCGGCTCGCAGCACGCCTGTTCGACGCGCCCAAGGCCGCGGTCG
TGCTTGTGGACGAAGCGCGCATCTGGCGCGCCGCCTATGTCGGCTATGCGGGCCCCGAAGCCCCGCGCGAGGGTGATCTG
GCCCACAGGGTGGTCGTCGCCAACGCGCCCGTCGGCCTTGCCGTCCCGATCCGCGATTGCGCAGGTCGCGTGCTGGGCGC
CCTGGTGGTCGAAGGCCCCGGCATGGGCGGTCCCGCTGCGGAAGAGGACCTGCAGGCCCTGGGCGATCTGGCCGACCTGG
CGACGGAGGTCCTGTTCGGCCCGTGCGCCAAGGTTCCGACGCTGGAGAGCGAGCGCCTCGACCTGGCCATCGCCGCCGCC
AGCCTGGGCGAATTCGAATGGTGCGTGGCCACCAACACCTTCAGGATCAGCCCCCGCCTGGCCAAGCTGTCGGGGATTCC
CGAAGGCGAGCTGGACAGCCAGGGCGGGAACGCTCTCTACGCCTACATCCATCCCGATGACCGCGAAGCGGTCCGCGCCA
ATATCGATCGGCAATTGGCCCAGAGCGGCCGCTTCACCGCCGAGTATCGACGCACGCCCCTCGAGCATGGCGGCGAGACC
TGGAACAGCGTCGCAGGCGTCATGCTGATGGACGCCGACGGACAGCCCTCGCGGCTGATCGGGGTCGTCCAGGACATCAC
CCCGCGCAAGCTGCAGGAAGCTCAGCGTGAGAGCCTGGTCGCCGAGCTGGACCATCGGATCAAGAACCTGCTCGCCGTGG
TCCAGTCCGTGGCGGCGCAGTCGGCCCGCAAGTCCGCGTCTCTGGACGTCTTCCTGAAGACCTTCGCCGCGCGCCTGAAG
TCGATGAGCTCGGCGCACGACCTGCTGAGCGCCGCGCGCTGGCGGGGCGCGACCCTGGCGCGCATCGCCGCCGCCGAACT
GGGAGGCCTGGCCCCCACCCAGACGCGATGGGACGGCCCGGAACTGTTCCTGACGCCCCGCGCGGCGGCCGCCCTGTCGC
TGGCCCTGCACGAGTTGGCGGTCAACGCGGTGCGCTATGGCTCGCTGTCGACCGAAAACGGCAAGGTCGAGGTGGTCTGG
CGGCGCACCCCCGAAGGCGGCTTCGCGCTGGAATGGCTGGAGACCGGCGGCCCGCCGGCCGTGGCCCCCGCGACCAAGGG
CTTCGGCGCCACCCTGATCGAGGACGTGGCCGGTCGCGAACTGGGCGGTGCGGCGAAGATCAGCTATCGCCCCGGCGGCG
TGACCGCGATGATTCAAGGCGCCCCGGACGCCCTGGCCGACGCCCCGCCGATCGAGCCCGTCAGCGCCGCGCCCGAGCGT
ATTGTTGAAACCGTGGTCGCCGCCGACGAAACCGTGCGCCCGGGCGCCATCGCCGGCCTCAAGGTGCTGATCGTCGAGGA
CTCGCTGCTGCTGGCGCTCGAGCTGGAAGCGGGCCTGGAGGACGCCGGCGTTGAGGTGGTCGGCTGCGCGGCCGAACTTG
GCGAAGCGCTGTCGATGGTCGAACTGGACTTCGATGTGGCGGTGCTCGACGCCGATCTCAACGGCCAGTCCGTGGCCCCG
GTCGCCGAGATCCTGCGCTCGATCGGACGGCCGTTCGTCTTCGCCACCGGCTACGCCGACAAGGCCGCCCCGATGGGCTT
CGACGCCCCGATCGTGCGCAAGCCCTACAACGTGCACCAGATCGCGCGTGCGGTGGCGGGGGTCACCGGACGGGCATGA

Upstream 100 bases:

>100_bases
CTTGGCGCTAGGGTTCCAAGTTAGCGCAACGCCAAAGGCTTCACCACCGAGGAATCCAAAGGCGCTCGCGCAATGCGCGA
AGCGAGGCTAAGGTCGAATC

Downstream 100 bases:

>100_bases
TCATCCGCCTGGCGACTCGGCGCGACCTCGCCGCCTGGGCCGACCTGCGCGCGGCCCTCTGGCCCGACGGCTCGGTCGAG
GAGCATCGCGCCGAGGCCGA

Product: response regulator/sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 612

Protein sequence:

>612_residues
MDDAPRASDDRLEAERLEAVRGLGVVDGIVNGPGLSRLIRLAARLFDAPKAAVVLVDEARIWRAAYVGYAGPEAPREGDL
AHRVVVANAPVGLAVPIRDCAGRVLGALVVEGPGMGGPAAEEDLQALGDLADLATEVLFGPCAKVPTLESERLDLAIAAA
SLGEFEWCVATNTFRISPRLAKLSGIPEGELDSQGGNALYAYIHPDDREAVRANIDRQLAQSGRFTAEYRRTPLEHGGET
WNSVAGVMLMDADGQPSRLIGVVQDITPRKLQEAQRESLVAELDHRIKNLLAVVQSVAAQSARKSASLDVFLKTFAARLK
SMSSAHDLLSAARWRGATLARIAAAELGGLAPTQTRWDGPELFLTPRAAAALSLALHELAVNAVRYGSLSTENGKVEVVW
RRTPEGGFALEWLETGGPPAVAPATKGFGATLIEDVAGRELGGAAKISYRPGGVTAMIQGAPDALADAPPIEPVSAAPER
IVETVVAADETVRPGAIAGLKVLIVEDSLLLALELEAGLEDAGVEVVGCAAELGEALSMVELDFDVAVLDADLNGQSVAP
VAEILRSIGRPFVFATGYADKAAPMGFDAPIVRKPYNVHQIARAVAGVTGRA

Sequences:

>Translated_612_residues
MDDAPRASDDRLEAERLEAVRGLGVVDGIVNGPGLSRLIRLAARLFDAPKAAVVLVDEARIWRAAYVGYAGPEAPREGDL
AHRVVVANAPVGLAVPIRDCAGRVLGALVVEGPGMGGPAAEEDLQALGDLADLATEVLFGPCAKVPTLESERLDLAIAAA
SLGEFEWCVATNTFRISPRLAKLSGIPEGELDSQGGNALYAYIHPDDREAVRANIDRQLAQSGRFTAEYRRTPLEHGGET
WNSVAGVMLMDADGQPSRLIGVVQDITPRKLQEAQRESLVAELDHRIKNLLAVVQSVAAQSARKSASLDVFLKTFAARLK
SMSSAHDLLSAARWRGATLARIAAAELGGLAPTQTRWDGPELFLTPRAAAALSLALHELAVNAVRYGSLSTENGKVEVVW
RRTPEGGFALEWLETGGPPAVAPATKGFGATLIEDVAGRELGGAAKISYRPGGVTAMIQGAPDALADAPPIEPVSAAPER
IVETVVAADETVRPGAIAGLKVLIVEDSLLLALELEAGLEDAGVEVVGCAAELGEALSMVELDFDVAVLDADLNGQSVAP
VAEILRSIGRPFVFATGYADKAAPMGFDAPIVRKPYNVHQIARAVAGVTGRA
>Mature_612_residues
MDDAPRASDDRLEAERLEAVRGLGVVDGIVNGPGLSRLIRLAARLFDAPKAAVVLVDEARIWRAAYVGYAGPEAPREGDL
AHRVVVANAPVGLAVPIRDCAGRVLGALVVEGPGMGGPAAEEDLQALGDLADLATEVLFGPCAKVPTLESERLDLAIAAA
SLGEFEWCVATNTFRISPRLAKLSGIPEGELDSQGGNALYAYIHPDDREAVRANIDRQLAQSGRFTAEYRRTPLEHGGET
WNSVAGVMLMDADGQPSRLIGVVQDITPRKLQEAQRESLVAELDHRIKNLLAVVQSVAAQSARKSASLDVFLKTFAARLK
SMSSAHDLLSAARWRGATLARIAAAELGGLAPTQTRWDGPELFLTPRAAAALSLALHELAVNAVRYGSLSTENGKVEVVW
RRTPEGGFALEWLETGGPPAVAPATKGFGATLIEDVAGRELGGAAKISYRPGGVTAMIQGAPDALADAPPIEPVSAAPER
IVETVVAADETVRPGAIAGLKVLIVEDSLLLALELEAGLEDAGVEVVGCAAELGEALSMVELDFDVAVLDADLNGQSVAP
VAEILRSIGRPFVFATGYADKAAPMGFDAPIVRKPYNVHQIARAVAGVTGRA

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 64179; Mature: 64179

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDAPRASDDRLEAERLEAVRGLGVVDGIVNGPGLSRLIRLAARLFDAPKAAVVLVDEAR
CCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECHH
IWRAAYVGYAGPEAPREGDLAHRVVVANAPVGLAVPIRDCAGRVLGALVVEGPGMGGPAA
HHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHEEECCCCCCCCC
EEDLQALGDLADLATEVLFGPCAKVPTLESERLDLAIAAASLGEFEWCVATNTFRISPRL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEECCHH
AKLSGIPEGELDSQGGNALYAYIHPDDREAVRANIDRQLAQSGRFTAEYRRTPLEHGGET
HHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCC
WNSVAGVMLMDADGQPSRLIGVVQDITPRKLQEAQRESLVAELDHRIKNLLAVVQSVAAQ
HHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARKSASLDVFLKTFAARLKSMSSAHDLLSAARWRGATLARIAAAELGGLAPTQTRWDGP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
ELFLTPRAAAALSLALHELAVNAVRYGSLSTENGKVEVVWRRTPEGGFALEWLETGGPPA
CEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCC
VAPATKGFGATLIEDVAGRELGGAAKISYRPGGVTAMIQGAPDALADAPPIEPVSAAPER
CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCHHHCCCCCCCCCCCCHHH
IVETVVAADETVRPGAIAGLKVLIVEDSLLLALELEAGLEDAGVEVVGCAAELGEALSMV
HHHHHHHCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHE
ELDFDVAVLDADLNGQSVAPVAEILRSIGRPFVFATGYADKAAPMGFDAPIVRKPYNVHQ
EECCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHCCCCCHHH
IARAVAGVTGRA
HHHHHHCCCCCC
>Mature Secondary Structure
MDDAPRASDDRLEAERLEAVRGLGVVDGIVNGPGLSRLIRLAARLFDAPKAAVVLVDEAR
CCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECHH
IWRAAYVGYAGPEAPREGDLAHRVVVANAPVGLAVPIRDCAGRVLGALVVEGPGMGGPAA
HHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHEEECCCCCCCCC
EEDLQALGDLADLATEVLFGPCAKVPTLESERLDLAIAAASLGEFEWCVATNTFRISPRL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEECCHH
AKLSGIPEGELDSQGGNALYAYIHPDDREAVRANIDRQLAQSGRFTAEYRRTPLEHGGET
HHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCC
WNSVAGVMLMDADGQPSRLIGVVQDITPRKLQEAQRESLVAELDHRIKNLLAVVQSVAAQ
HHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARKSASLDVFLKTFAARLKSMSSAHDLLSAARWRGATLARIAAAELGGLAPTQTRWDGP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
ELFLTPRAAAALSLALHELAVNAVRYGSLSTENGKVEVVWRRTPEGGFALEWLETGGPPA
CEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCC
VAPATKGFGATLIEDVAGRELGGAAKISYRPGGVTAMIQGAPDALADAPPIEPVSAAPER
CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCHHHCCCCCCCCCCCCHHH
IVETVVAADETVRPGAIAGLKVLIVEDSLLLALELEAGLEDAGVEVVGCAAELGEALSMV
HHHHHHHCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHE
ELDFDVAVLDADLNGQSVAPVAEILRSIGRPFVFATGYADKAAPMGFDAPIVRKPYNVHQ
EECCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHCCCCCHHH
IARAVAGVTGRA
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA