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The map label for this gene is ctpA [H]

Identifier: 16127665

GI number: 16127665

Start: 3678273

End: 3679667

Strand: Direct

Name: ctpA [H]

Synonym: CC_3435

Alternate gene names: 16127665

Gene position: 3678273-3679667 (Clockwise)

Preceding gene: 16127664

Following gene: 16127668

Centisome position: 91.57

GC content: 68.1

Gene sequence:

>1395_bases
ATGCGCAAGTACCTGCTCATTGGCGTTTCGGCCTTCGTCCTCGGCGCGGGGACGATGGCCTATATCAGTCCCATCGCCCA
GGCGAACAACGCCCCCAAGGCCCAGACCTACAAGCTTTTGGAACTGTTCGGCGACGTGCTGGGCACAGTCGAGGACCAGT
ACGTCACCGAGGTCGACGACAAGAAGCTGATCGAGGCGGCGCTGGACGGCATGCTGACCAGCCTGGACCCGCACTCGGGC
TACCTGGCGCCCGACGCCTTTGAAGACATGCAGGACACCACGCGCGGCGAGTACGGCGGGCTTGGCTTGGAAGTGACCAG
CGAAGAGGGCGTGGTCAAGGTGATCTCGCCGATGGACGGCACCCCCGCCTCGCGCGCCGGCATCCAGGCCGGTGACTACA
TCACCGCCGTCAACGGCCAGAGCGTGCTGGGCCTGACCGTCAACGAAGCCGTCAAGCAGATGCGCGGCACGGCCGGCGAG
GCCGTCACCCTGACGATCGCCCGCGAAAAGACCGACCCGTTCGACGTCAAGCTCGTGCGCGAGGTGATCAAGCCCAAGGC
CGCCATCGCCCGCATGGAAGGCGACTATGGCTATGTCCGCCTGCCGGGCTTCAACGAGAAGGCCACCGACGCCCTGGCCA
GCTCGGTCAGCGAGCTGAAATCCAAGAACCCGAAGATGAAGGGCCTGATCCTGGATCTGCGGAACAATCCGGGCGGCCTG
TTGGACCAGGCGGTCGGCGTCGCCGACGTGTTCCTGGACGGCGGTGAGGTGGTCAGCCAGCGCGGTCGCGACCCGCGCAA
CATCCAGCGCTACAACGCCCGGGGCGGCGACATGCTGAACGGCCTGCCGATGGTGGTGCTGATCAACCAGGGCTCGGCCT
CGGCGGCCGAAATCGTGGCCGGCGCGCTGCAGGACCGCAAGCGCGCCGAAGTCGTGGGCCTGACCAGCTTCGGCAAGGGC
TCGGTCCAGACGGTCATCCCGCTCCGCGGCGGCGCCGACGGCGCGCTGAAGCTGACCACGGCGCGCTACTTCACGCCTTC
GGGCCGCTCGATCCAGAAGACGGGCATCGCCCCCGACCTCGAGGTCGCCCAGACCCGCGACCAGGCGCAAGACATCGCCA
ACCGCGTATGGTTCAGCGAGGCCAGCTTCAAGAACGCCCTGAACGCCGACGAAGGCAAGTCGCGCGTCGGCGCCCACACG
CCGGCCGAGGCCCCGCCCACAGGCTTCGACGACAAGAAGGGTGATTTCCAGCTGCAGCGCGCGATCGCGGTGCTGCAGGC
GGGCGGCGTCGCCAAGACGCCCAAGCTTCCCAAGCCGGCCGCCAAGGTCGCCGAGGTCACCGCCAAGGCCGCCGCAGCGG
CGGGCGGCAAGACGCCGGTCACCGAGGTCAAGTAG

Upstream 100 bases:

>100_bases
TAATTGTGGCCGTAATTATACCTCCGGTCACGGACAGGGTTGGTCGGGGCTAAACACGGTTTGCGGCGCCGCGCGCCGCT
AGGGAGCCTTCTGGGCCTTT

Downstream 100 bases:

>100_bases
GCGGCGACATCTCGCCCAAGACCCTGAAACGTCAACGCCGCCCCGGGACCCTGGGGCGGCGTTTTCGTTGTCGGAGCGCG
CTTTCTAGAAGTCGGCCGAG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MRKYLLIGVSAFVLGAGTMAYISPIAQANNAPKAQTYKLLELFGDVLGTVEDQYVTEVDDKKLIEAALDGMLTSLDPHSG
YLAPDAFEDMQDTTRGEYGGLGLEVTSEEGVVKVISPMDGTPASRAGIQAGDYITAVNGQSVLGLTVNEAVKQMRGTAGE
AVTLTIAREKTDPFDVKLVREVIKPKAAIARMEGDYGYVRLPGFNEKATDALASSVSELKSKNPKMKGLILDLRNNPGGL
LDQAVGVADVFLDGGEVVSQRGRDPRNIQRYNARGGDMLNGLPMVVLINQGSASAAEIVAGALQDRKRAEVVGLTSFGKG
SVQTVIPLRGGADGALKLTTARYFTPSGRSIQKTGIAPDLEVAQTRDQAQDIANRVWFSEASFKNALNADEGKSRVGAHT
PAEAPPTGFDDKKGDFQLQRAIAVLQAGGVAKTPKLPKPAAKVAEVTAKAAAAAGGKTPVTEVK

Sequences:

>Translated_464_residues
MRKYLLIGVSAFVLGAGTMAYISPIAQANNAPKAQTYKLLELFGDVLGTVEDQYVTEVDDKKLIEAALDGMLTSLDPHSG
YLAPDAFEDMQDTTRGEYGGLGLEVTSEEGVVKVISPMDGTPASRAGIQAGDYITAVNGQSVLGLTVNEAVKQMRGTAGE
AVTLTIAREKTDPFDVKLVREVIKPKAAIARMEGDYGYVRLPGFNEKATDALASSVSELKSKNPKMKGLILDLRNNPGGL
LDQAVGVADVFLDGGEVVSQRGRDPRNIQRYNARGGDMLNGLPMVVLINQGSASAAEIVAGALQDRKRAEVVGLTSFGKG
SVQTVIPLRGGADGALKLTTARYFTPSGRSIQKTGIAPDLEVAQTRDQAQDIANRVWFSEASFKNALNADEGKSRVGAHT
PAEAPPTGFDDKKGDFQLQRAIAVLQAGGVAKTPKLPKPAAKVAEVTAKAAAAAGGKTPVTEVK
>Mature_464_residues
MRKYLLIGVSAFVLGAGTMAYISPIAQANNAPKAQTYKLLELFGDVLGTVEDQYVTEVDDKKLIEAALDGMLTSLDPHSG
YLAPDAFEDMQDTTRGEYGGLGLEVTSEEGVVKVISPMDGTPASRAGIQAGDYITAVNGQSVLGLTVNEAVKQMRGTAGE
AVTLTIAREKTDPFDVKLVREVIKPKAAIARMEGDYGYVRLPGFNEKATDALASSVSELKSKNPKMKGLILDLRNNPGGL
LDQAVGVADVFLDGGEVVSQRGRDPRNIQRYNARGGDMLNGLPMVVLINQGSASAAEIVAGALQDRKRAEVVGLTSFGKG
SVQTVIPLRGGADGALKLTTARYFTPSGRSIQKTGIAPDLEVAQTRDQAQDIANRVWFSEASFKNALNADEGKSRVGAHT
PAEAPPTGFDDKKGDFQLQRAIAVLQAGGVAKTPKLPKPAAKVAEVTAKAAAAAGGKTPVTEVK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=331, Percent_Identity=29.0030211480363, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48812; Mature: 48812

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYLLIGVSAFVLGAGTMAYISPIAQANNAPKAQTYKLLELFGDVLGTVEDQYVTEVDD
CCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCH
KKLIEAALDGMLTSLDPHSGYLAPDAFEDMQDTTRGEYGGLGLEVTSEEGVVKVISPMDG
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCC
TPASRAGIQAGDYITAVNGQSVLGLTVNEAVKQMRGTAGEAVTLTIAREKTDPFDVKLVR
CCCHHCCCCCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHH
EVIKPKAAIARMEGDYGYVRLPGFNEKATDALASSVSELKSKNPKMKGLILDLRNNPGGL
HHHCCHHHHHEECCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCH
LDQAVGVADVFLDGGEVVSQRGRDPRNIQRYNARGGDMLNGLPMVVLINQGSASAAEIVA
HHHHHCHHHHEECCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHH
GALQDRKRAEVVGLTSFGKGSVQTVIPLRGGADGALKLTTARYFTPSGRSIQKTGIAPDL
HHHHHCCHHEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCEECCCCCCCH
EVAQTRDQAQDIANRVWFSEASFKNALNADEGKSRVGAHTPAEAPPTGFDDKKGDFQLQR
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHH
AIAVLQAGGVAKTPKLPKPAAKVAEVTAKAAAAAGGKTPVTEVK
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRKYLLIGVSAFVLGAGTMAYISPIAQANNAPKAQTYKLLELFGDVLGTVEDQYVTEVDD
CCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCH
KKLIEAALDGMLTSLDPHSGYLAPDAFEDMQDTTRGEYGGLGLEVTSEEGVVKVISPMDG
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCC
TPASRAGIQAGDYITAVNGQSVLGLTVNEAVKQMRGTAGEAVTLTIAREKTDPFDVKLVR
CCCHHCCCCCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHH
EVIKPKAAIARMEGDYGYVRLPGFNEKATDALASSVSELKSKNPKMKGLILDLRNNPGGL
HHHCCHHHHHEECCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCH
LDQAVGVADVFLDGGEVVSQRGRDPRNIQRYNARGGDMLNGLPMVVLINQGSASAAEIVA
HHHHHCHHHHEECCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHH
GALQDRKRAEVVGLTSFGKGSVQTVIPLRGGADGALKLTTARYFTPSGRSIQKTGIAPDL
HHHHHCCHHEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCEECCCCCCCH
EVAQTRDQAQDIANRVWFSEASFKNALNADEGKSRVGAHTPAEAPPTGFDDKKGDFQLQR
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHH
AIAVLQAGGVAKTPKLPKPAAKVAEVTAKAAAAAGGKTPVTEVK
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]