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The map label for this gene is aidB [C]

Identifier: 16127623

GI number: 16127623

Start: 3635608

End: 3637419

Strand: Direct

Name: aidB [C]

Synonym: CC_3393

Alternate gene names: 16127623

Gene position: 3635608-3637419 (Clockwise)

Preceding gene: 16127618

Following gene: 16127625

Centisome position: 90.51

GC content: 70.2

Gene sequence:

>1812_bases
TTGGCGACCCTCGGCGCCCCGCTTAAAGACGGCGCACGACCTGGAGTTTCTCCCATGACTTTCCGCGCGCCTGTTCGCGA
TCTTGCCTTCTCTCTGCGCCATGTCGCCGGCTTCGAGCGTCTGGCCGACGCCTTTCCCGAGGCCGACGCCGACACGGTTG
CGGCGGTGCTGGAAGCGGCGGGCGCGTTCGCCAGCGACATCCTGGCGCCGCTGAACCGCCAGGGCGATCTGGTCGGCGCA
AGACTCGAGAACGGCGTGGTTCGCACCGCGCCCGGCTTCGCCGACGCCTACCAGCAGTTCGCGCAAGGCGGCTGGACCAG
CCTGGCCGCACCGGCCGAGCATGGCGGTCAGGGCCTGCCCAAGACGCTGGAGGTGGCCGTCCTCGAAATGGTCCAGGCGG
CCAACATGGCGTTTGGCCTCTGCCCGATGCTGAGCCTGGGCGCCATCGAGGCCCTGGAGCTGTGCGGCTCGCCCGAACAG
AAGGCCAAGTATCTGGGAAAGCTGGTGTCGGGCGAATGGACCGGCACCATGAACCTGACCGAGCCCCAGGCCGGCTCGGA
CCTAGCGGCCCTGACCACGATGGCCACGCCGGATGGCGACGGCGGTTGGCGGATCACCGGCCAGAAGATCTACATCACCT
GGGGCGACCACGACGCCGCCGACAACATCGTCCACCTCGTTCTGGCGCGCACGCCTGACGCTCCGCCTGGGGTGAAGGGC
ATCTCGCTGTTCCTGGCCCCCAAGGTGCTGGTCGGCGATGACGGCAAGCTGGGGCCAGCCAACGCCCTGCGGGCCGGTAG
CCTGGAGCACAAGCTGGGCATCCACGGCTCGCCCACCTGCGTGATGCTGTTCGAGGGCGCCAAGGCCGAGCTGGTCGGCG
GTCTGGGGCAAGGCCTGCCCAACATGTTCGTGATGATGAACGCCGCCCGCCTGCAGGTCGGGACCCAGGGCGTGGCGATC
GCCGAGCGGGCCTATCAGCAGGCCCTCGCCTTCAGCCAGGACCGCGCCCAGGGCCGCTCGGCCTGGACCGGCGCCTATCC
TTCGCGCCTATTCGATCATCCGGACGTGCGGCGCACGCTGGTGTTGATGAAGGCCCACATCGAGGCCGCGCGGGGCATAT
GTCTGTCGACCGCCGTCGCCGCCGATCTGGCCCGCGCCGCGCCGGACGCGGCGACCCGCACGGCCGCCAAGTTGCGCGAG
GAACTGCTGACCCCCATCGCCAAGGCCTGGTCGACCGACATCGGCGTCTGGGTCGCCTCGCAAGGCGTGCAGATCCACGG
CGGCATGGGCTTTATCGAGGAAACCGGCGCGGCCCAGCACTATCGCGACGCCCGCATCGCCCCGATCTACGAGGGCACAA
ACGGCATCCAGGCCATCGACCTGGTCGGCCGCAAGCTGATGCTGGGCGAAGGCCAAGCCGTCGGCGACCTGATGGACGAC
ATCCGCGACACCATCGACCTCTTGAAGGCTTCGGACCTGAAGAGCGTCGGCCTGCGTCTGGAGGCCGCGCTCGACGCCGC
CGCCTCGGCGACCGCCTGGCTGATCGAACGCCGCGCCAAGGCCATGCCGGACGCGCTGGCGGGCGCCACGGCCTATCAGA
CGTTGCTGGGCGATGTGGTCGGCGGCTGGATGCTGGCCAAGGGGGCCCTGGCGGCCGACGGCGAGGCCGACGCGGCCTGG
GCCGAAAGCAAGCGCGCCCTGGCCCGCGTGTTCGCCGAAGCCGTTCTGGCCCAGGTCCCCGGCGCGGCGGCCGGGGTCAT
GATCGGGGCGGCGGATTTCGAGGCGATGACCCCCGAGGTGCTGGGGGCTTAA

Upstream 100 bases:

>100_bases
TTCCCCGATCTAGGTACTCCAGCACGGCTTTGAAGGGCTTGATGTTCACGAGCGCGTGATAACGCACTCTCATGATATTC
ATTGATGAGGCGCCGGGCGC

Downstream 100 bases:

>100_bases
GCGCCTCTCCAAAACAACGTCATCCCGCGCACAAGGCGCGGGATGACGGCAAGACGAGCTGAACTTACGCTTACAGCTGT
TCCAGCAGATACTCGGCCGA

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MATLGAPLKDGARPGVSPMTFRAPVRDLAFSLRHVAGFERLADAFPEADADTVAAVLEAAGAFASDILAPLNRQGDLVGA
RLENGVVRTAPGFADAYQQFAQGGWTSLAAPAEHGGQGLPKTLEVAVLEMVQAANMAFGLCPMLSLGAIEALELCGSPEQ
KAKYLGKLVSGEWTGTMNLTEPQAGSDLAALTTMATPDGDGGWRITGQKIYITWGDHDAADNIVHLVLARTPDAPPGVKG
ISLFLAPKVLVGDDGKLGPANALRAGSLEHKLGIHGSPTCVMLFEGAKAELVGGLGQGLPNMFVMMNAARLQVGTQGVAI
AERAYQQALAFSQDRAQGRSAWTGAYPSRLFDHPDVRRTLVLMKAHIEAARGICLSTAVAADLARAAPDAATRTAAKLRE
ELLTPIAKAWSTDIGVWVASQGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVGRKLMLGEGQAVGDLMDD
IRDTIDLLKASDLKSVGLRLEAALDAAASATAWLIERRAKAMPDALAGATAYQTLLGDVVGGWMLAKGALAADGEADAAW
AESKRALARVFAEAVLAQVPGAAAGVMIGAADFEAMTPEVLGA

Sequences:

>Translated_603_residues
MATLGAPLKDGARPGVSPMTFRAPVRDLAFSLRHVAGFERLADAFPEADADTVAAVLEAAGAFASDILAPLNRQGDLVGA
RLENGVVRTAPGFADAYQQFAQGGWTSLAAPAEHGGQGLPKTLEVAVLEMVQAANMAFGLCPMLSLGAIEALELCGSPEQ
KAKYLGKLVSGEWTGTMNLTEPQAGSDLAALTTMATPDGDGGWRITGQKIYITWGDHDAADNIVHLVLARTPDAPPGVKG
ISLFLAPKVLVGDDGKLGPANALRAGSLEHKLGIHGSPTCVMLFEGAKAELVGGLGQGLPNMFVMMNAARLQVGTQGVAI
AERAYQQALAFSQDRAQGRSAWTGAYPSRLFDHPDVRRTLVLMKAHIEAARGICLSTAVAADLARAAPDAATRTAAKLRE
ELLTPIAKAWSTDIGVWVASQGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVGRKLMLGEGQAVGDLMDD
IRDTIDLLKASDLKSVGLRLEAALDAAASATAWLIERRAKAMPDALAGATAYQTLLGDVVGGWMLAKGALAADGEADAAW
AESKRALARVFAEAVLAQVPGAAAGVMIGAADFEAMTPEVLGA
>Mature_602_residues
ATLGAPLKDGARPGVSPMTFRAPVRDLAFSLRHVAGFERLADAFPEADADTVAAVLEAAGAFASDILAPLNRQGDLVGAR
LENGVVRTAPGFADAYQQFAQGGWTSLAAPAEHGGQGLPKTLEVAVLEMVQAANMAFGLCPMLSLGAIEALELCGSPEQK
AKYLGKLVSGEWTGTMNLTEPQAGSDLAALTTMATPDGDGGWRITGQKIYITWGDHDAADNIVHLVLARTPDAPPGVKGI
SLFLAPKVLVGDDGKLGPANALRAGSLEHKLGIHGSPTCVMLFEGAKAELVGGLGQGLPNMFVMMNAARLQVGTQGVAIA
ERAYQQALAFSQDRAQGRSAWTGAYPSRLFDHPDVRRTLVLMKAHIEAARGICLSTAVAADLARAAPDAATRTAAKLREE
LLTPIAKAWSTDIGVWVASQGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVGRKLMLGEGQAVGDLMDDI
RDTIDLLKASDLKSVGLRLEAALDAAASATAWLIERRAKAMPDALAGATAYQTLLGDVVGGWMLAKGALAADGEADAAWA
ESKRALARVFAEAVLAQVPGAAAGVMIGAADFEAMTPEVLGA

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=414, Percent_Identity=27.2946859903382, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4557233, Length=376, Percent_Identity=28.9893617021277, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI4501857, Length=319, Percent_Identity=27.5862068965517, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI21361497, Length=378, Percent_Identity=28.5714285714286, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4557235, Length=413, Percent_Identity=26.8765133171913, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI76496475, Length=413, Percent_Identity=26.8765133171913, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI7656849, Length=383, Percent_Identity=26.1096605744125, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI226958414, Length=380, Percent_Identity=26.5789473684211, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI226958412, Length=380, Percent_Identity=26.5789473684211, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4557231, Length=326, Percent_Identity=29.1411042944785, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI187960098, Length=326, Percent_Identity=29.1411042944785, Blast_Score=92, Evalue=1e-18,
Organism=Escherichia coli, GI87082384, Length=304, Percent_Identity=28.9473684210526, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI87081958, Length=376, Percent_Identity=27.9255319148936, Blast_Score=89, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=401, Percent_Identity=28.1795511221945, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17506239, Length=402, Percent_Identity=28.1094527363184, Blast_Score=122, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI86563381, Length=557, Percent_Identity=26.9299820466786, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI86563383, Length=557, Percent_Identity=26.9299820466786, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17569725, Length=432, Percent_Identity=27.7777777777778, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=429, Percent_Identity=27.2727272727273, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=368, Percent_Identity=27.445652173913, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=440, Percent_Identity=26.3636363636364, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17533517, Length=446, Percent_Identity=25.1121076233184, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17570075, Length=360, Percent_Identity=26.6666666666667, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=281, Percent_Identity=27.0462633451957, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=185, Percent_Identity=31.8918918918919, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=369, Percent_Identity=25.4742547425474, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=303, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17505929, Length=368, Percent_Identity=24.7282608695652, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71985192, Length=294, Percent_Identity=26.8707482993197, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21356377, Length=382, Percent_Identity=30.1047120418848, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24646207, Length=434, Percent_Identity=26.9585253456221, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666513, Length=450, Percent_Identity=25.3333333333333, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24660351, Length=326, Percent_Identity=31.2883435582822, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281363737, Length=359, Percent_Identity=25.0696378830084, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21355753, Length=421, Percent_Identity=28.2660332541568, Blast_Score=93, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 62632; Mature: 62501

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLGAPLKDGARPGVSPMTFRAPVRDLAFSLRHVAGFERLADAFPEADADTVAAVLEAA
CCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GAFASDILAPLNRQGDLVGARLENGVVRTAPGFADAYQQFAQGGWTSLAAPAEHGGQGLP
HHHHHHHHHHCCCCCCEEEHHHHCCEEECCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCC
KTLEVAVLEMVQAANMAFGLCPMLSLGAIEALELCGSPEQKAKYLGKLVSGEWTGTMNLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCC
EPQAGSDLAALTTMATPDGDGGWRITGQKIYITWGDHDAADNIVHLVLARTPDAPPGVKG
CCCCCCCHHHHEEECCCCCCCCEEEECCEEEEEECCCCCHHHHEEEEEECCCCCCCCCCC
ISLFLAPKVLVGDDGKLGPANALRAGSLEHKLGIHGSPTCVMLFEGAKAELVGGLGQGLP
EEEEECCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCC
NMFVMMNAARLQVGTQGVAIAERAYQQALAFSQDRAQGRSAWTGAYPSRLFDHPDVRRTL
HHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHH
VLMKAHIEAARGICLSTAVAADLARAAPDAATRTAAKLREELLTPIAKAWSTDIGVWVAS
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
QGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVGRKLMLGEGQAVGDLMDD
CCEEEECCCCCHHHCCCHHHHCCCCCEEEEECCCCCHHHHHHCCHHEECCCCHHHHHHHH
IRDTIDLLKASDLKSVGLRLEAALDAAASATAWLIERRAKAMPDALAGATAYQTLLGDVV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GGWMLAKGALAADGEADAAWAESKRALARVFAEAVLAQVPGAAAGVMIGAADFEAMTPEV
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCHHHCCHHH
LGA
HCC
>Mature Secondary Structure 
ATLGAPLKDGARPGVSPMTFRAPVRDLAFSLRHVAGFERLADAFPEADADTVAAVLEAA
CCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GAFASDILAPLNRQGDLVGARLENGVVRTAPGFADAYQQFAQGGWTSLAAPAEHGGQGLP
HHHHHHHHHHCCCCCCEEEHHHHCCEEECCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCC
KTLEVAVLEMVQAANMAFGLCPMLSLGAIEALELCGSPEQKAKYLGKLVSGEWTGTMNLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCC
EPQAGSDLAALTTMATPDGDGGWRITGQKIYITWGDHDAADNIVHLVLARTPDAPPGVKG
CCCCCCCHHHHEEECCCCCCCCEEEECCEEEEEECCCCCHHHHEEEEEECCCCCCCCCCC
ISLFLAPKVLVGDDGKLGPANALRAGSLEHKLGIHGSPTCVMLFEGAKAELVGGLGQGLP
EEEEECCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCC
NMFVMMNAARLQVGTQGVAIAERAYQQALAFSQDRAQGRSAWTGAYPSRLFDHPDVRRTL
HHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHH
VLMKAHIEAARGICLSTAVAADLARAAPDAATRTAAKLREELLTPIAKAWSTDIGVWVAS
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
QGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQAIDLVGRKLMLGEGQAVGDLMDD
CCEEEECCCCCHHHCCCHHHHCCCCCEEEEECCCCCHHHHHHCCHHEECCCCHHHHHHHH
IRDTIDLLKASDLKSVGLRLEAALDAAASATAWLIERRAKAMPDALAGATAYQTLLGDVV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GGWMLAKGALAADGEADAAWAESKRALARVFAEAVLAQVPGAAAGVMIGAADFEAMTPEV
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCHHHCCHHH
LGA
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]