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The map label for this gene is flaD [H]

Identifier: 16127206

GI number: 16127206

Start: 3195520

End: 3196794

Strand: Direct

Name: flaD [H]

Synonym: CC_2976

Alternate gene names: 16127206

Gene position: 3195520-3196794 (Clockwise)

Preceding gene: 16127205

Following gene: 16127207

Centisome position: 79.55

GC content: 68.86

Gene sequence:

>1275_bases
TTGGTCGGGGGCGGCGTCAGTCTGAACGCCTTACGCGGCGCTGCGGCTTTGTCCGAAGCGGACGCGCGGCTGTCGAGCGC
GGGGAACCGCGTCTCGACCGGGCGACGCATCGACTCGCCACGCGACAACGGCGCGACCTGGAGCATCTCGCGGCGTATGG
CGACGGAAGCCCGCAGCTTCCAGGTCGTCAATGACAGCCTGGCGCGCGGCGCGTCGATGTTGGACGTCGCCGCGGCCGGG
GTGGAGCAGATCCACGATTTTCTGGCGACGGCGCGTGAGAAGGCTCTAGCCTTGCGCGACCCGTCCCTCGACGAGCCCTC
GAAGCTCGCCCTGGTCGCCGACGTGAAGATGCTTGTCGATCAGGTCAATCGCGTCGCCATGCAAGCGGTGTTCGACGGCA
AGCGGCCGCTGGCCGACAAGCTCACAACCGGCTCGGTGACCTATAGCCAGACCACCTACAACCCGGTGACAACGGCGGCG
ACGCCGGCGAGCCTGGGCGGAGCCTTCGTCAACGCCTCGGGCGTGGCCGCCCAGACCTTTCTCCGCGACGGCGGCGCAAC
GCCCGGTCGGATCGACCTCTATCTGGACGCTTATGGGGTGCCGGACGTTCTGGAGATCTGGCAAGGCGGCGCGCGCCGCG
CGGCCACGGGTCAGGGCTTTGTTGGCGGCGGCGCGCCGGTGGCCGCGGGCACGGCGGTGTCCGGCCGCTCGATCCTCAGC
TTCGACTACAACCCCGCCAGCGGCCACGATATCGAGTTCCGCTTCAACGAGGCGGGAAGCCTGGCCGGCACGGCCTGGGC
GGTGGACGCGATCGCCCTTCAGCCCCTGGCCAGCGCGCGGCCAACGACCAACACCACCAGCTTCACTGTGCCGGACGTCA
CCACCTCGTCGGCCACCGGCTACGACTTCACCTCCGACCCCAACGGCGGGAGTGAGCTGGTCACCTCGCAGCCGCTGACG
GCCGAGGCCTTGGACCTGGACACCATCGACTGGACCAATGTCGGCGGAATCTTCGAGTCCGTGGAGCAGGCGCTCAACAA
GACGCGTGCGGCCGGTATCTATTTTGGCGGCCGCCAGGAAAGCTTCGCCGGCCTGATCGCCCAGAACCGCCTGATGAGCG
ACACCTTGGCGACAGGCGTCGGCAATCTGGTCGATGCGGACCTCGCGCGGGAGTCCGCCCGCCTCCAGGCCCTGGAAGCC
TCGGCCAGCCTCGCCAGCCAGGCGCTGTCGATCGCCAACAGCCAGCAGAGCTGGGTCCTCGGCCTGTTCAACTGA

Upstream 100 bases:

>100_bases
GACGAACGCTGATACGACTTTAAGTCGGCGTAAACCTCGCCCATCTCAAAAACAACTTTGGAGGCCGGGGGATCGCGGGC
CTAAACGGGGGAATTGCGAA

Downstream 100 bases:

>100_bases
CCGCCCCCCACTCCACCGCTTCGAGGGGGCCAAGGTTTGCGCGACCTCAGCGGCGACAGTATCTTGCACGCGAAGAGGGG
ATGACCACCTTGTCCAGGAC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MVGGGVSLNALRGAAALSEADARLSSAGNRVSTGRRIDSPRDNGATWSISRRMATEARSFQVVNDSLARGASMLDVAAAG
VEQIHDFLATAREKALALRDPSLDEPSKLALVADVKMLVDQVNRVAMQAVFDGKRPLADKLTTGSVTYSQTTYNPVTTAA
TPASLGGAFVNASGVAAQTFLRDGGATPGRIDLYLDAYGVPDVLEIWQGGARRAATGQGFVGGGAPVAAGTAVSGRSILS
FDYNPASGHDIEFRFNEAGSLAGTAWAVDAIALQPLASARPTTNTTSFTVPDVTTSSATGYDFTSDPNGGSELVTSQPLT
AEALDLDTIDWTNVGGIFESVEQALNKTRAAGIYFGGRQESFAGLIAQNRLMSDTLATGVGNLVDADLARESARLQALEA
SASLASQALSIANSQQSWVLGLFN

Sequences:

>Translated_424_residues
MVGGGVSLNALRGAAALSEADARLSSAGNRVSTGRRIDSPRDNGATWSISRRMATEARSFQVVNDSLARGASMLDVAAAG
VEQIHDFLATAREKALALRDPSLDEPSKLALVADVKMLVDQVNRVAMQAVFDGKRPLADKLTTGSVTYSQTTYNPVTTAA
TPASLGGAFVNASGVAAQTFLRDGGATPGRIDLYLDAYGVPDVLEIWQGGARRAATGQGFVGGGAPVAAGTAVSGRSILS
FDYNPASGHDIEFRFNEAGSLAGTAWAVDAIALQPLASARPTTNTTSFTVPDVTTSSATGYDFTSDPNGGSELVTSQPLT
AEALDLDTIDWTNVGGIFESVEQALNKTRAAGIYFGGRQESFAGLIAQNRLMSDTLATGVGNLVDADLARESARLQALEA
SASLASQALSIANSQQSWVLGLFN
>Mature_424_residues
MVGGGVSLNALRGAAALSEADARLSSAGNRVSTGRRIDSPRDNGATWSISRRMATEARSFQVVNDSLARGASMLDVAAAG
VEQIHDFLATAREKALALRDPSLDEPSKLALVADVKMLVDQVNRVAMQAVFDGKRPLADKLTTGSVTYSQTTYNPVTTAA
TPASLGGAFVNASGVAAQTFLRDGGATPGRIDLYLDAYGVPDVLEIWQGGARRAATGQGFVGGGAPVAAGTAVSGRSILS
FDYNPASGHDIEFRFNEAGSLAGTAWAVDAIALQPLASARPTTNTTSFTVPDVTTSSATGYDFTSDPNGGSELVTSQPLT
AEALDLDTIDWTNVGGIFESVEQALNKTRAAGIYFGGRQESFAGLIAQNRLMSDTLATGVGNLVDADLARESARLQALEA
SASLASQALSIANSQQSWVLGLFN

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 43886; Mature: 43886

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGGGVSLNALRGAAALSEADARLSSAGNRVSTGRRIDSPRDNGATWSISRRMATEARSF
CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
QVVNDSLARGASMLDVAAAGVEQIHDFLATAREKALALRDPSLDEPSKLALVADVKMLVD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEHHHHHHHHHH
QVNRVAMQAVFDGKRPLADKLTTGSVTYSQTTYNPVTTAATPASLGGAFVNASGVAAQTF
HHHHHHHHHHHCCCCCCHHCCCCCCEEECCCCCCCCCCCCCCHHHCCCEECCCCHHHHHH
LRDGGATPGRIDLYLDAYGVPDVLEIWQGGARRAATGQGFVGGGAPVAAGTAVSGRSILS
HHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
FDYNPASGHDIEFRFNEAGSLAGTAWAVDAIALQPLASARPTTNTTSFTVPDVTTSSATG
ECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC
YDFTSDPNGGSELVTSQPLTAEALDLDTIDWTNVGGIFESVEQALNKTRAAGIYFGGRQE
CCCCCCCCCCCCCEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCH
SFAGLIAQNRLMSDTLATGVGNLVDADLARESARLQALEASASLASQALSIANSQQSWVL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
GLFN
EECC
>Mature Secondary Structure
MVGGGVSLNALRGAAALSEADARLSSAGNRVSTGRRIDSPRDNGATWSISRRMATEARSF
CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
QVVNDSLARGASMLDVAAAGVEQIHDFLATAREKALALRDPSLDEPSKLALVADVKMLVD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEHHHHHHHHHH
QVNRVAMQAVFDGKRPLADKLTTGSVTYSQTTYNPVTTAATPASLGGAFVNASGVAAQTF
HHHHHHHHHHHCCCCCCHHCCCCCCEEECCCCCCCCCCCCCCHHHCCCEECCCCHHHHHH
LRDGGATPGRIDLYLDAYGVPDVLEIWQGGARRAATGQGFVGGGAPVAAGTAVSGRSILS
HHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
FDYNPASGHDIEFRFNEAGSLAGTAWAVDAIALQPLASARPTTNTTSFTVPDVTTSSATG
ECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC
YDFTSDPNGGSELVTSQPLTAEALDLDTIDWTNVGGIFESVEQALNKTRAAGIYFGGRQE
CCCCCCCCCCCCCEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCH
SFAGLIAQNRLMSDTLATGVGNLVDADLARESARLQALEASASLASQALSIANSQQSWVL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
GLFN
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA