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The map label for this gene is 16127050

Identifier: 16127050

GI number: 16127050

Start: 3038734

End: 3040314

Strand: Direct

Name: 16127050

Synonym: CC_2818

Alternate gene names: NA

Gene position: 3038734-3040314 (Clockwise)

Preceding gene: 16127048

Following gene: 16127053

Centisome position: 75.65

GC content: 72.74

Gene sequence:

>1581_bases
ATGGTCCTCGGGGAATTTGCGCCTTGGCGGTTGTGGTCTCTCGCCGGGAGCGCCAAAGACTGGAGAGGGAGCAAACAACC
GCGCGCCATGACCGATCTCGTCACCAACCAGGCCTGGACGCTCATCGACAACGGGCGAGCCGCCGACGCCCTGCGCCTGA
CCACGGGCCCCGTCGCCCTGCCCCAGGCCTCGGCCGGCCTGTTGATGGCCCATGCTGCGGCGTTGAAGGCGCTGGGCCGG
ACCGACGAGGCCCTGACGTTCAACCGCCGCGCCGTGGCCCGCGCCCCCGGCGACCGCTTTTCCTGGTACAATCTGGCCGC
CACCCTGGGGGACCTCGCCCTGGACGACGAGGCCGAGGGCGCGGCGCGCAAGACCATCGCCCTTGGCCTGGATGTTCCCG
AGGTGCGGCTGGTTCTGGGCAAGGCGCTGCAGGGCCTGCACCGCTATGACGAGGCCGAGGCGACGTTCGTCCGCGCCCTG
GCGGCGCGGCCGAGCGATGCGACCGTCCACCTGAATCTGGCCCAGCTGCGCTGGATGCGATCGGGCCGCAGCGACGAGGC
GCTGGCGCCGCTGGATGCGGCCATCGCCCGCCATCCGGCCGACGTCACCCTGCGCACGATCCGCAGCAATGTCCTGACCT
TCGCCGGCGACCATGCCGGGGCCGACGCCACGCTGGAGGACGCGCTGACCCGCGCGCCGGGCGATCTGGCGGTGCGCATC
GCCGCAGCCCGCGCGGCCGGCGCGGTGGGCGACCGGGCGCGGATGCTGGCCCATGCCCGCGAGGCCGCCCGCCTGGCGCC
AGGGGCGCTGGAGAGCCAGACCGTCTTGTGCGAGGCCCTGCTCGCCGCGGGCCAGGCCGACGTCGCCGCGCGAACGGCCG
AGGCCCTGGTCGCGGCCGCGCCCGACGACCAGTACGCGCTGGTGCTGCGCAACACCGCCTGGCGGATCACGGGCGATGCC
CAAGGCGATCTTTTCAGAGACTACGCCGCCCTGGTGCGCACCGACCGGCTCGAGACGCCCGAGGGCTGGGACAGCCTGGA
CGCCTTCCTCGACGCCCTGCGCGACCGGATGCTGGAACTGCACGACCTGAAGACCCACCCGCTGAACCAGTCGCTGCGGG
GCGGCAGTCAGGTTCCGTCGCTGGACCGCTCGCGCGATCCGCTGGTGCAGGCCTTCTTCGCCTGCGCCCACAAGGCGGTG
GCGCGCTATATCGAGGCGCTGGGCGCGGGCGAGGATCCGATCCGTCGGCGGCGCGCGTCGGACTTCGCCTTTGCGGGCGG
CTGGTCGGTGCGGCTGCGGTCCGAGGGCTTCCACGCCGACCACGTGCATCCGCGCGGCTGGATCTCGTCGGCCTTCTATC
TGGATCTGCCCGGCCGGTTCGATGATGAGACCACGCGCGCCGGCTGGCTGCGCTTCGGCCGCCCCGGATGCCTGACGGAG
CCCGCCCTCGAGGCCGAGCACTTCATCAAGCCCGAGCGCGGAACCCTGGCCCTGTTCCCCTCGTGCCTGTGGCACGGCAC
CCAGCCGTTCACTGACGCCGACCACCGCCTGACGATCGCCTTCGACGTCGTTCCGCGCTGA

Upstream 100 bases:

>100_bases
CAGGCGGAACAGGCTCTCGCAGTGCCACAGGGTGTCGTCGGCGTCGACGCCGACGGTCGTGATCGTGCTCATGGCGGCAG
GCATAGCAGGCGCTCAGGGG

Downstream 100 bases:

>100_bases
GGCGCATGGCAACGCCCAAAAGAAAACCCGCCTCAATCGCTTGAGGCGGGCCTTCGAAACCGGGTTTCCCCGCCGCCGAA
GCGGCGGGGACGTCTCGATT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide Repeat Protein; TPR Repeat Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MVLGEFAPWRLWSLAGSAKDWRGSKQPRAMTDLVTNQAWTLIDNGRAADALRLTTGPVALPQASAGLLMAHAAALKALGR
TDEALTFNRRAVARAPGDRFSWYNLAATLGDLALDDEAEGAARKTIALGLDVPEVRLVLGKALQGLHRYDEAEATFVRAL
AARPSDATVHLNLAQLRWMRSGRSDEALAPLDAAIARHPADVTLRTIRSNVLTFAGDHAGADATLEDALTRAPGDLAVRI
AAARAAGAVGDRARMLAHAREAARLAPGALESQTVLCEALLAAGQADVAARTAEALVAAAPDDQYALVLRNTAWRITGDA
QGDLFRDYAALVRTDRLETPEGWDSLDAFLDALRDRMLELHDLKTHPLNQSLRGGSQVPSLDRSRDPLVQAFFACAHKAV
ARYIEALGAGEDPIRRRRASDFAFAGGWSVRLRSEGFHADHVHPRGWISSAFYLDLPGRFDDETTRAGWLRFGRPGCLTE
PALEAEHFIKPERGTLALFPSCLWHGTQPFTDADHRLTIAFDVVPR

Sequences:

>Translated_526_residues
MVLGEFAPWRLWSLAGSAKDWRGSKQPRAMTDLVTNQAWTLIDNGRAADALRLTTGPVALPQASAGLLMAHAAALKALGR
TDEALTFNRRAVARAPGDRFSWYNLAATLGDLALDDEAEGAARKTIALGLDVPEVRLVLGKALQGLHRYDEAEATFVRAL
AARPSDATVHLNLAQLRWMRSGRSDEALAPLDAAIARHPADVTLRTIRSNVLTFAGDHAGADATLEDALTRAPGDLAVRI
AAARAAGAVGDRARMLAHAREAARLAPGALESQTVLCEALLAAGQADVAARTAEALVAAAPDDQYALVLRNTAWRITGDA
QGDLFRDYAALVRTDRLETPEGWDSLDAFLDALRDRMLELHDLKTHPLNQSLRGGSQVPSLDRSRDPLVQAFFACAHKAV
ARYIEALGAGEDPIRRRRASDFAFAGGWSVRLRSEGFHADHVHPRGWISSAFYLDLPGRFDDETTRAGWLRFGRPGCLTE
PALEAEHFIKPERGTLALFPSCLWHGTQPFTDADHRLTIAFDVVPR
>Mature_526_residues
MVLGEFAPWRLWSLAGSAKDWRGSKQPRAMTDLVTNQAWTLIDNGRAADALRLTTGPVALPQASAGLLMAHAAALKALGR
TDEALTFNRRAVARAPGDRFSWYNLAATLGDLALDDEAEGAARKTIALGLDVPEVRLVLGKALQGLHRYDEAEATFVRAL
AARPSDATVHLNLAQLRWMRSGRSDEALAPLDAAIARHPADVTLRTIRSNVLTFAGDHAGADATLEDALTRAPGDLAVRI
AAARAAGAVGDRARMLAHAREAARLAPGALESQTVLCEALLAAGQADVAARTAEALVAAAPDDQYALVLRNTAWRITGDA
QGDLFRDYAALVRTDRLETPEGWDSLDAFLDALRDRMLELHDLKTHPLNQSLRGGSQVPSLDRSRDPLVQAFFACAHKAV
ARYIEALGAGEDPIRRRRASDFAFAGGWSVRLRSEGFHADHVHPRGWISSAFYLDLPGRFDDETTRAGWLRFGRPGCLTE
PALEAEHFIKPERGTLALFPSCLWHGTQPFTDADHRLTIAFDVVPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57028; Mature: 57028

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLGEFAPWRLWSLAGSAKDWRGSKQPRAMTDLVTNQAWTLIDNGRAADALRLTTGPVAL
CCCCCCCCHHHHHHCCCCHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCC
PQASAGLLMAHAAALKALGRTDEALTFNRRAVARAPGDRFSWYNLAATLGDLALDDEAEG
CCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
AARKTIALGLDVPEVRLVLGKALQGLHRYDEAEATFVRALAARPSDATVHLNLAQLRWMR
CHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH
SGRSDEALAPLDAAIARHPADVTLRTIRSNVLTFAGDHAGADATLEDALTRAPGDLAVRI
CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCEEEE
AAARAAGAVGDRARMLAHAREAARLAPGALESQTVLCEALLAAGQADVAARTAEALVAAA
EHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHEEEC
PDDQYALVLRNTAWRITGDAQGDLFRDYAALVRTDRLETPEGWDSLDAFLDALRDRMLEL
CCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
HDLKTHPLNQSLRGGSQVPSLDRSRDPLVQAFFACAHKAVARYIEALGAGEDPIRRRRAS
HHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
DFAFAGGWSVRLRSEGFHADHVHPRGWISSAFYLDLPGRFDDETTRAGWLRFGRPGCLTE
CCEEECCEEEEEECCCCCCCCCCCCCHHCCEEEEECCCCCCCCCCHHHHHEECCCCCCCC
PALEAEHFIKPERGTLALFPSCLWHGTQPFTDADHRLTIAFDVVPR
CCCCHHHHCCCCCCCEEECHHHHHCCCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MVLGEFAPWRLWSLAGSAKDWRGSKQPRAMTDLVTNQAWTLIDNGRAADALRLTTGPVAL
CCCCCCCCHHHHHHCCCCHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCC
PQASAGLLMAHAAALKALGRTDEALTFNRRAVARAPGDRFSWYNLAATLGDLALDDEAEG
CCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
AARKTIALGLDVPEVRLVLGKALQGLHRYDEAEATFVRALAARPSDATVHLNLAQLRWMR
CHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH
SGRSDEALAPLDAAIARHPADVTLRTIRSNVLTFAGDHAGADATLEDALTRAPGDLAVRI
CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCEEEE
AAARAAGAVGDRARMLAHAREAARLAPGALESQTVLCEALLAAGQADVAARTAEALVAAA
EHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHEEEC
PDDQYALVLRNTAWRITGDAQGDLFRDYAALVRTDRLETPEGWDSLDAFLDALRDRMLEL
CCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
HDLKTHPLNQSLRGGSQVPSLDRSRDPLVQAFFACAHKAVARYIEALGAGEDPIRRRRAS
HHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
DFAFAGGWSVRLRSEGFHADHVHPRGWISSAFYLDLPGRFDDETTRAGWLRFGRPGCLTE
CCEEECCEEEEEECCCCCCCCCCCCCHHCCEEEEECCCCCCCCCCHHHHHEECCCCCCCC
PALEAEHFIKPERGTLALFPSCLWHGTQPFTDADHRLTIAFDVVPR
CCCCHHHHCCCCCCCEEECHHHHHCCCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA