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The map label for this gene is insD1 [C]

Identifier: 16126975

GI number: 16126975

Start: 2956536

End: 2957462

Strand: Direct

Name: insD1 [C]

Synonym: CC_2742

Alternate gene names: 16126975

Gene position: 2956536-2957462 (Clockwise)

Preceding gene: 16126974

Following gene: 16126976

Centisome position: 73.6

GC content: 68.18

Gene sequence:

>927_bases
ATGGTAGGGCCCGCCGCCATGCGCGAAGGCGTCGCTCATCTGCGGACGGTGTTCGAGATCAGCGAGCGGCGGGCCTGCTC
CATCGTCAAGGCGGACCGCAAGATGGTGCGCTACCGATCGCGCCGCCCGCCGGATACCGAGCTTCGCGAGCGCCTGCGCG
GCCTGGCCGCCGAGCGCCGGCGGTTCGGCTATCGACGGCTGTTCGTCCTGCTGCGTCGGGAGGGCGAGCTTTCCGGCAAG
AACCGCATCTACCGGCTCTACCGCGAGGAGGGCCTAACGGTGCGCAAACGCCGGGCTCGCCGCCGCGCCATCGGCACACG
GGCGCCGATCCTGGTGGAGGCCAAGGCCAATGCCCGCTGGTCGCTGGACTTCGTGCACGACCAGTTCGCGGGCGGGCGCC
GGTTCAGGGTTCTCAATGTGGTCGACGACGTCACCCGGGAATGTCTGGCGGCGATCCCTGACACCTCGATCTCGGGTCGC
CGTGTGGCGCGCGAGCTGTCGGCGTTGATCGCTCGTCGTGGCCGGCCGGGGATGATCGTCAGCGACAATGGCACGGAGTT
CACCTCGACGGCCATTCTGGCCTGGGCGGAGGATCATCGCGTCGCCTGGCATTATATCGCGCCGGGCAAGCCCACCCAGA
ACGGCTTCGTGGAGAGCTTCAACGGCCGGATGCGCGACGAACTGCTCAACGAGACCCTGTTCTTCGGCCTCGATCACGCC
CGCCAGAAGCTCGCTGCCTGGGCCGAAGACTACAACACACGCCGGCCGCACTCGTCGATCGGCTACCAGACCCCCGCGGC
CTATGCCGCGCACCTGAACGCAACAGGCCGACCCGCTGCGCAATGTGGGAGCTCCACGGCTCGGCCTGTTGCTACAACCG
CGCCATCGGGCGTAACCAATGCCGAGACTCTGGTCCGCGCTGGATGA

Upstream 100 bases:

>100_bases
AGCGGCTGAAGGCGCTGGAGGACGAGAACCGGCGGCTCAAGTCGTTGCTGGCCGACGCCATACTCGACAAGGCGGCGTTG
AACGAGCTGCTCTCAAAAAA

Downstream 100 bases:

>100_bases
AAGATCAGAGGCAGGTCAGCCGGGCCAAGCCTGGAACGCCATTACCGTAGGGGCCAGCACCCATAAGGTCACCCAAACCG
AAGGCGCCGCGGGCGCTCCA

Product: IS511 transposase OrfB

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MVGPAAMREGVAHLRTVFEISERRACSIVKADRKMVRYRSRRPPDTELRERLRGLAAERRRFGYRRLFVLLRREGELSGK
NRIYRLYREEGLTVRKRRARRRAIGTRAPILVEAKANARWSLDFVHDQFAGGRRFRVLNVVDDVTRECLAAIPDTSISGR
RVARELSALIARRGRPGMIVSDNGTEFTSTAILAWAEDHRVAWHYIAPGKPTQNGFVESFNGRMRDELLNETLFFGLDHA
RQKLAAWAEDYNTRRPHSSIGYQTPAAYAAHLNATGRPAAQCGSSTARPVATTAPSGVTNAETLVRAG

Sequences:

>Translated_308_residues
MVGPAAMREGVAHLRTVFEISERRACSIVKADRKMVRYRSRRPPDTELRERLRGLAAERRRFGYRRLFVLLRREGELSGK
NRIYRLYREEGLTVRKRRARRRAIGTRAPILVEAKANARWSLDFVHDQFAGGRRFRVLNVVDDVTRECLAAIPDTSISGR
RVARELSALIARRGRPGMIVSDNGTEFTSTAILAWAEDHRVAWHYIAPGKPTQNGFVESFNGRMRDELLNETLFFGLDHA
RQKLAAWAEDYNTRRPHSSIGYQTPAAYAAHLNATGRPAAQCGSSTARPVATTAPSGVTNAETLVRAG
>Mature_308_residues
MVGPAAMREGVAHLRTVFEISERRACSIVKADRKMVRYRSRRPPDTELRERLRGLAAERRRFGYRRLFVLLRREGELSGK
NRIYRLYREEGLTVRKRRARRRAIGTRAPILVEAKANARWSLDFVHDQFAGGRRFRVLNVVDDVTRECLAAIPDTSISGR
RVARELSALIARRGRPGMIVSDNGTEFTSTAILAWAEDHRVAWHYIAPGKPTQNGFVESFNGRMRDELLNETLFFGLDHA
RQKLAAWAEDYNTRRPHSSIGYQTPAAYAAHLNATGRPAAQCGSSTARPVATTAPSGVTNAETLVRAG

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789424, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789224, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788305, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787669, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786558, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34697; Mature: 34697

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGPAAMREGVAHLRTVFEISERRACSIVKADRKMVRYRSRRPPDTELRERLRGLAAERR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RFGYRRLFVLLRREGELSGKNRIYRLYREEGLTVRKRRARRRAIGTRAPILVEAKANARW
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCEE
SLDFVHDQFAGGRRFRVLNVVDDVTRECLAAIPDTSISGRRVARELSALIARRGRPGMIV
EEEHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
SDNGTEFTSTAILAWAEDHRVAWHYIAPGKPTQNGFVESFNGRMRDELLNETLFFGLDHA
CCCCCCCHHHEEEEEECCCEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
RQKLAAWAEDYNTRRPHSSIGYQTPAAYAAHLNATGRPAAQCGSSTARPVATTAPSGVTN
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCEECCCCCCCC
AETLVRAG
HHHHHCCC
>Mature Secondary Structure
MVGPAAMREGVAHLRTVFEISERRACSIVKADRKMVRYRSRRPPDTELRERLRGLAAERR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RFGYRRLFVLLRREGELSGKNRIYRLYREEGLTVRKRRARRRAIGTRAPILVEAKANARW
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCEE
SLDFVHDQFAGGRRFRVLNVVDDVTRECLAAIPDTSISGRRVARELSALIARRGRPGMIV
EEEHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
SDNGTEFTSTAILAWAEDHRVAWHYIAPGKPTQNGFVESFNGRMRDELLNETLFFGLDHA
CCCCCCCHHHEEEEEECCCEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
RQKLAAWAEDYNTRRPHSSIGYQTPAAYAAHLNATGRPAAQCGSSTARPVATTAPSGVTN
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCEECCCCCCCC
AETLVRAG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]