| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is fecR [H]
Identifier: 16126941
GI number: 16126941
Start: 2920715
End: 2921788
Strand: Direct
Name: fecR [H]
Synonym: CC_2708
Alternate gene names: 16126941
Gene position: 2920715-2921788 (Clockwise)
Preceding gene: 16126940
Following gene: 16126942
Centisome position: 72.71
GC content: 70.02
Gene sequence:
>1074_bases ATGATCGATGACCAAGCCAAGGCTGCAAACGCTCAGCCCGGCGGGGCGGAACCCTCCGGTGCGCGGGACAGGCGCGCGCG CGACGAGGCGGCCGCCTGGTACGGCAAGATGAGCGGCCAGCGGGTCAGCAACGCCGATTTGGCGGCCTTCTTCGCCTGGC GCGAGAACAGCCTCAATGACGCGGCCTACACCCGGATCGAGGCCTTAACGACAAGCGTGCGCGCCTTGGCGGACGACCCC AGACTTCAGGCGATCGCCGAGACGGCGGCGCGTCGACCGCGCGGCGTCGTTGCGCGTCTACGCAGCCTTGGCCAAGGCGC AGGGCTCAGGACGGCCGGCGTCGGCGCGGCTCTGGTCGCGGCCATGGTGATCGGTGCGGTGCTGCTTGGCCAAGTCGGTC AGCAGACCTATCGCACGCAGATCGGCGAGCGGCGGGCCGTTAGCCTGGACGACGGCTCGACGATCGAGCTCAACACCAAC AGCCAGGTGCGGGTGCGTCTGTCCAAGACGCAGCGCAGCCTGATCCTCGACAGGGGACAGGCGATGTTCATCGTGGCCCA TGACGCAGCGCGTCCGTTCGTCGTCACGGCCGGAGACACTTCGGTGCGGGCCATAGGCACCCGGTTCGAGGTCTATCGGG CCGCCGGCGCGGTGCGGGTGACCTTGGCGGAGGGCCGCGTCCAGGTCAGCAAGGCTGGCCGGCGGAACGATGGCGGCGGA CAAGGCGGCGAGCGTTCCACACCGGTGATCCTGAACGCCGGACAGCGGGTCGACATGGCTCCTGCCGCACCGGCCAGCCC GGTGGCTGTCGACGTCGCGGCGGTGACCGGGTGGACTCGCGGGCGCCTGACCTTCAAGGATGCGTCCCTGGCCGAGGCCG TGGCGGAGGTCAATCGCTATAGCCGTCGCCAAGTGGTGCTGGGTCCCGGGACGCCGGCCGATCAGCGGGTCAATGGTGAG TTCGACGCCGGCGATACCGAGACCTTCGCCCGCGGCATGGCCGTGCTGCTGGACTTGAAGACCGTCGCGCGCCCGGACGG GGGCATCGAACTGGCCGCCTCGCCCGCCGTTTGA
Upstream 100 bases:
>100_bases CGCGCAACTGCGCGGCATCTCCGTCAAGGCGGTGGAGAAGCGAATGACCCAGGCTATCGCGCGATGCGCCGACATGATCC GGGGCTAGGCGGATCACGCC
Downstream 100 bases:
>100_bases CGGCAAAAATCTTTCGTCGCCCGGTAGGGTGAGACGGCTTCCCAGGCGTCTCAGCCCTGCCGCGCCCCGGCAAGAGACCG CCACAGTGGCGGCCCCGTGC
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MIDDQAKAANAQPGGAEPSGARDRRARDEAAAWYGKMSGQRVSNADLAAFFAWRENSLNDAAYTRIEALTTSVRALADDP RLQAIAETAARRPRGVVARLRSLGQGAGLRTAGVGAALVAAMVIGAVLLGQVGQQTYRTQIGERRAVSLDDGSTIELNTN SQVRVRLSKTQRSLILDRGQAMFIVAHDAARPFVVTAGDTSVRAIGTRFEVYRAAGAVRVTLAEGRVQVSKAGRRNDGGG QGGERSTPVILNAGQRVDMAPAAPASPVAVDVAAVTGWTRGRLTFKDASLAEAVAEVNRYSRRQVVLGPGTPADQRVNGE FDAGDTETFARGMAVLLDLKTVARPDGGIELAASPAV
Sequences:
>Translated_357_residues MIDDQAKAANAQPGGAEPSGARDRRARDEAAAWYGKMSGQRVSNADLAAFFAWRENSLNDAAYTRIEALTTSVRALADDP RLQAIAETAARRPRGVVARLRSLGQGAGLRTAGVGAALVAAMVIGAVLLGQVGQQTYRTQIGERRAVSLDDGSTIELNTN SQVRVRLSKTQRSLILDRGQAMFIVAHDAARPFVVTAGDTSVRAIGTRFEVYRAAGAVRVTLAEGRVQVSKAGRRNDGGG QGGERSTPVILNAGQRVDMAPAAPASPVAVDVAAVTGWTRGRLTFKDASLAEAVAEVNRYSRRQVVLGPGTPADQRVNGE FDAGDTETFARGMAVLLDLKTVARPDGGIELAASPAV >Mature_357_residues MIDDQAKAANAQPGGAEPSGARDRRARDEAAAWYGKMSGQRVSNADLAAFFAWRENSLNDAAYTRIEALTTSVRALADDP RLQAIAETAARRPRGVVARLRSLGQGAGLRTAGVGAALVAAMVIGAVLLGQVGQQTYRTQIGERRAVSLDDGSTIELNTN SQVRVRLSKTQRSLILDRGQAMFIVAHDAARPFVVTAGDTSVRAIGTRFEVYRAAGAVRVTLAEGRVQVSKAGRRNDGGG QGGERSTPVILNAGQRVDMAPAAPASPVAVDVAAVTGWTRGRLTFKDASLAEAVAEVNRYSRRQVVLGPGTPADQRVNGE FDAGDTETFARGMAVLLDLKTVARPDGGIELAASPAV
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=322, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 37486; Mature: 37486
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDDQAKAANAQPGGAEPSGARDRRARDEAAAWYGKMSGQRVSNADLAAFFAWRENSLND CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCH AAYTRIEALTTSVRALADDPRLQAIAETAARRPRGVVARLRSLGQGAGLRTAGVGAALVA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH AMVIGAVLLGQVGQQTYRTQIGERRAVSLDDGSTIELNTNSQVRVRLSKTQRSLILDRGQ HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEEEHHHHHHHHCCCC AMFIVAHDAARPFVVTAGDTSVRAIGTRFEVYRAAGAVRVTLAEGRVQVSKAGRRNDGGG EEEEEEECCCCCEEEECCCCCEEHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCCCCCC QGGERSTPVILNAGQRVDMAPAAPASPVAVDVAAVTGWTRGRLTFKDASLAEAVAEVNRY CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHH SRRQVVLGPGTPADQRVNGEFDAGDTETFARGMAVLLDLKTVARPDGGIELAASPAV CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC >Mature Secondary Structure MIDDQAKAANAQPGGAEPSGARDRRARDEAAAWYGKMSGQRVSNADLAAFFAWRENSLND CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCH AAYTRIEALTTSVRALADDPRLQAIAETAARRPRGVVARLRSLGQGAGLRTAGVGAALVA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH AMVIGAVLLGQVGQQTYRTQIGERRAVSLDDGSTIELNTNSQVRVRLSKTQRSLILDRGQ HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEEEHHHHHHHHCCCC AMFIVAHDAARPFVVTAGDTSVRAIGTRFEVYRAAGAVRVTLAEGRVQVSKAGRRNDGGG EEEEEEECCCCCEEEECCCCCEEHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCCCCCC QGGERSTPVILNAGQRVDMAPAAPASPVAVDVAAVTGWTRGRLTFKDASLAEAVAEVNRY CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHH SRRQVVLGPGTPADQRVNGEFDAGDTETFARGMAVLLDLKTVARPDGGIELAASPAV CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]