Click here to switch to the map view.

The map label for this gene is mcpA [H]

Identifier: 16126924

GI number: 16126924

Start: 2906775

End: 2907524

Strand: Direct

Name: mcpA [H]

Synonym: CC_2691

Alternate gene names: 16126924

Gene position: 2906775-2907524 (Clockwise)

Preceding gene: 16126923

Following gene: 16126925

Centisome position: 72.36

GC content: 61.2

Gene sequence:

>750_bases
ATGGTCAAGCGTACGGCCGCCGGCGCTCAGGAGGCGAGCCGGGTCGTCAATGCCGCCAAGGACGATGCTGAAACCGGCGG
TCAGGTGGTCGCCGATGCTGTTGCGGCCATGGGCGAAATTGAGAAGTCCTCAGAGCAGATCGGCAGCATCATAAGCGTGA
TCGACGAGATTGCCTTTCAAACTAACCTCCTGGCCCTCAACGCGGGCGTTGAGGCTGCTCGCGCCGGCGAAGCCGGTCGC
GGCTTTGCGGTTGTCGCGCAAGAAGTCCGCGCCTTGGCCCAGCGGTCAGCCGAGGCCGCCCGCGAGATCAAGGCCCTGAT
CCTCGCCTCGACCCAGCAAGTCGACGCCGGCGTGGTGCTTGTCGGCAAGACCGGCGATGCGCTGGACCGCATTGTCTCTC
AGGTCGTCAAAATCAATGAGGTCGTCAGGGAGATTGCGGTGTCAGCTCAGAACCAGGCGACGGGACTCGAGCAGGTCAAT
ACGGCCTTGAACCAGATGGATCAGATCACCCAACAGAACGCTGCGATGGTTGAGGAAGCGACTGCAGCCAGTCATGCTTT
GGCCATGGAGGCTGACAACCTGACCGTACTGATGGGGCAGTTTCGGATCGGAGAAACTCCAGAAGCGCAGTCCAATCGCA
GGGACTTAAGCAAAGGCGCCGGCGTCCCGTCTAATTTGCGACCGATAGCGCAAAGCCACGCTCGTGCGGGATCCGCAGCC
GCAAAGATTGATGGCTGGGACGAGTTCTAA

Upstream 100 bases:

>100_bases
TGGGAGCTCCACGGCTCGGCCTGTTGCTACAACCGCGCCATCGGGCGTAACCAATGCCGAGACTCTGGTCCGCGCTGGAT
GAAAGATCAGAGGCAGGTCA

Downstream 100 bases:

>100_bases
CCCAGAACACAATGGTCTCTGCGCGCGCCAAAGGCGATCAAAAGGCCCGTAAGGCCGCTTGTCTGCGCGCCCCCTTTGGC
GAACCTCCAGAAGGTCTGCT

Product: methyl-accepting chemotaxis protein McpF

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MVKRTAAGAQEASRVVNAAKDDAETGGQVVADAVAAMGEIEKSSEQIGSIISVIDEIAFQTNLLALNAGVEAARAGEAGR
GFAVVAQEVRALAQRSAEAAREIKALILASTQQVDAGVVLVGKTGDALDRIVSQVVKINEVVREIAVSAQNQATGLEQVN
TALNQMDQITQQNAAMVEEATAASHALAMEADNLTVLMGQFRIGETPEAQSNRRDLSKGAGVPSNLRPIAQSHARAGSAA
AKIDGWDEF

Sequences:

>Translated_249_residues
MVKRTAAGAQEASRVVNAAKDDAETGGQVVADAVAAMGEIEKSSEQIGSIISVIDEIAFQTNLLALNAGVEAARAGEAGR
GFAVVAQEVRALAQRSAEAAREIKALILASTQQVDAGVVLVGKTGDALDRIVSQVVKINEVVREIAVSAQNQATGLEQVN
TALNQMDQITQQNAAMVEEATAASHALAMEADNLTVLMGQFRIGETPEAQSNRRDLSKGAGVPSNLRPIAQSHARAGSAA
AKIDGWDEF
>Mature_249_residues
MVKRTAAGAQEASRVVNAAKDDAETGGQVVADAVAAMGEIEKSSEQIGSIISVIDEIAFQTNLLALNAGVEAARAGEAGR
GFAVVAQEVRALAQRSAEAAREIKALILASTQQVDAGVVLVGKTGDALDRIVSQVVKINEVVREIAVSAQNQATGLEQVN
TALNQMDQITQQNAAMVEEATAASHALAMEADNLTVLMGQFRIGETPEAQSNRRDLSKGAGVPSNLRPIAQSHARAGSAA
AKIDGWDEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=251, Percent_Identity=46.6135458167331, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1788194, Length=204, Percent_Identity=51.4705882352941, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1787690, Length=222, Percent_Identity=46.3963963963964, Blast_Score=170, Evalue=7e-44,
Organism=Escherichia coli, GI2367378, Length=202, Percent_Identity=53.4653465346535, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1789453, Length=200, Percent_Identity=43.5, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 25869; Mature: 25869

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRTAAGAQEASRVVNAAKDDAETGGQVVADAVAAMGEIEKSSEQIGSIISVIDEIAFQ
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLLALNAGVEAARAGEAGRGFAVVAQEVRALAQRSAEAAREIKALILASTQQVDAGVVL
HHHEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VGKTGDALDRIVSQVVKINEVVREIAVSAQNQATGLEQVNTALNQMDQITQQNAAMVEEA
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAASHALAMEADNLTVLMGQFRIGETPEAQSNRRDLSKGAGVPSNLRPIAQSHARAGSAA
HHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCH
AKIDGWDEF
HCCCCCCCC
>Mature Secondary Structure
MVKRTAAGAQEASRVVNAAKDDAETGGQVVADAVAAMGEIEKSSEQIGSIISVIDEIAFQ
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLLALNAGVEAARAGEAGRGFAVVAQEVRALAQRSAEAAREIKALILASTQQVDAGVVL
HHHEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VGKTGDALDRIVSQVVKINEVVREIAVSAQNQATGLEQVNTALNQMDQITQQNAAMVEEA
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAASHALAMEADNLTVLMGQFRIGETPEAQSNRRDLSKGAGVPSNLRPIAQSHARAGSAA
HHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCH
AKIDGWDEF
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]