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The map label for this gene is intA [C]

Identifier: 16126915

GI number: 16126915

Start: 2898905

End: 2900203

Strand: Direct

Name: intA [C]

Synonym: CC_2681

Alternate gene names: 16126915

Gene position: 2898905-2900203 (Clockwise)

Preceding gene: 16126914

Following gene: 16126922

Centisome position: 72.17

GC content: 60.89

Gene sequence:

>1299_bases
GTGACAACGCCAGTAAACGGTAGCGTCATCCCACTCATCAGCCTTCGGGAGAGCCGCATGCCGAGCCTCACAGACGGCGC
GATCCGCCGCGCGCTAAAACAGGTCGAACAGACCCAAAAACCCGTGACGCTCGCCGACGGCGAAGGGCGCGGCATAGGCC
GCCTGATCTTGTTCGTTCGCCCGATGCCGACCCGGGTGATTGCTTACTGGCTGGTGCAGCAATGGCGTGCCGGCGCCCGC
AGCCGAAAGAAGATCGGCGCCTACCCGTCGATGTCGCTGAACCAGGCGAGAAACATCTTCGATCGCGACTTCGCAGACGC
TATCCAGAAAGGGCGCAGCATCAAAGCGCTGGGCGATACGCGGGCCGGCACCCTCGGCGACCTCTTCGACGCCTACATCG
CGCACCTGAAATCGTCCGGGAAGAAATCCTGGAAGGAGGCGGAAAAGGGTCTCAACAAGGTCGCGGACACCTTGGGTCGC
CACCGCCCGGCGCGCGACATCGAACCGCACGAAATCGTCGACATCATCAGGCCGATCTATGGTCGGGGCACCCGGTCCAT
GGCCGATCACGTAAGAGGATACCTGAGGGCGGCCTTCAGCTGGGGCATCAAATCCGAACACGACTATCGCCACGCGTCGC
CACGCCGGTTCGGCCTGACCAAAAATCCGGCGGCCGGGATCCCTTCGGAGCCTTATGTTCCCGGCAATCGCTGGCTCGAT
GAAGAAGAATTCCTACGGCTCTACCGTTGGCTTGAGTGCCCCGACACACCGGTTCACCCACCCTACACCCGCGCCGTTCG
GCTTCTGATGCTAACCGGTCAGCGCGTGGAGGAGATCGCCCGGCTGCATATTGCTCAATGGGACGCCAAGGAACGGATCA
TAGACTGGTCAACGACAAAGAACGGCAAACCTCACGCCATTCCCGTTCCTGACCTGGCGGCAGAGCTCTTGGAGTCGATC
AAACCCAATAACTACGGCTGGTTCTTCCCGTCAGCCTTTGATCCAAGCAAGCCTGTAGCCCACAACACGCTCTATTCGTT
CATGTGGCGGCAAAGGGAACGCGGCGTCATTCCCGTCGTGACCAACCGAGACCTTCGCCGTACATGGAAAACCCTGGCTG
GTAAGGCCGGGCTTTCCAAGGAAATCCGCGATCGCCTCCAGAACCACACCCTCCAGGACGTCAGCTCGAAGGCCTATGAT
CGATGGAACTATATGCCGGAGAAGCGGGCTGCGATGAAACAGTGGAACAGCTTTGTCCGCAGCGTCCTCACCCCCGATCG
CCTGACATCGGCGGCCTAG

Upstream 100 bases:

>100_bases
CATAACATTGATTTTATTGATAAATTTTCCTTTTCAAGCATTGGCGCATCCGGCATGCTGGGGCCGGTAAAAAGACGCGT
TTTCGCCGCTTACGCCATCA

Downstream 100 bases:

>100_bases
GAGCAGTCCTGCGCGGCGATAGCCACGCCGCCTAGATCAGCCTTGCGAGTGTCTCCTCGCAACGCCTCTTGAGGTCATTC
ACGTGCGGGCGCTCGGCCAA

Product: phage integrase family integrase/recombinase

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Phage Integrase; Phage Integrase Family Site Specific Recombinase; Phage-Related Integrase; Transposase; Prophage INTEGRASE PROTEIN; Phage-Like Integrase; Prophage Integrase; Integrase Protein; Prbable Integrase; Site-Specific Recombinase Phage Integrase Family Protein; DNA Integration/Recombination/Invertion Protein; Phage Integrase/Recombinase Protein; Prophage CP4-Like Integrase; Bacteriophage P4-Type Integrase; Integrative Genetic Element

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MTTPVNGSVIPLISLRESRMPSLTDGAIRRALKQVEQTQKPVTLADGEGRGIGRLILFVRPMPTRVIAYWLVQQWRAGAR
SRKKIGAYPSMSLNQARNIFDRDFADAIQKGRSIKALGDTRAGTLGDLFDAYIAHLKSSGKKSWKEAEKGLNKVADTLGR
HRPARDIEPHEIVDIIRPIYGRGTRSMADHVRGYLRAAFSWGIKSEHDYRHASPRRFGLTKNPAAGIPSEPYVPGNRWLD
EEEFLRLYRWLECPDTPVHPPYTRAVRLLMLTGQRVEEIARLHIAQWDAKERIIDWSTTKNGKPHAIPVPDLAAELLESI
KPNNYGWFFPSAFDPSKPVAHNTLYSFMWRQRERGVIPVVTNRDLRRTWKTLAGKAGLSKEIRDRLQNHTLQDVSSKAYD
RWNYMPEKRAAMKQWNSFVRSVLTPDRLTSAA

Sequences:

>Translated_432_residues
MTTPVNGSVIPLISLRESRMPSLTDGAIRRALKQVEQTQKPVTLADGEGRGIGRLILFVRPMPTRVIAYWLVQQWRAGAR
SRKKIGAYPSMSLNQARNIFDRDFADAIQKGRSIKALGDTRAGTLGDLFDAYIAHLKSSGKKSWKEAEKGLNKVADTLGR
HRPARDIEPHEIVDIIRPIYGRGTRSMADHVRGYLRAAFSWGIKSEHDYRHASPRRFGLTKNPAAGIPSEPYVPGNRWLD
EEEFLRLYRWLECPDTPVHPPYTRAVRLLMLTGQRVEEIARLHIAQWDAKERIIDWSTTKNGKPHAIPVPDLAAELLESI
KPNNYGWFFPSAFDPSKPVAHNTLYSFMWRQRERGVIPVVTNRDLRRTWKTLAGKAGLSKEIRDRLQNHTLQDVSSKAYD
RWNYMPEKRAAMKQWNSFVRSVLTPDRLTSAA
>Mature_431_residues
TTPVNGSVIPLISLRESRMPSLTDGAIRRALKQVEQTQKPVTLADGEGRGIGRLILFVRPMPTRVIAYWLVQQWRAGARS
RKKIGAYPSMSLNQARNIFDRDFADAIQKGRSIKALGDTRAGTLGDLFDAYIAHLKSSGKKSWKEAEKGLNKVADTLGRH
RPARDIEPHEIVDIIRPIYGRGTRSMADHVRGYLRAAFSWGIKSEHDYRHASPRRFGLTKNPAAGIPSEPYVPGNRWLDE
EEFLRLYRWLECPDTPVHPPYTRAVRLLMLTGQRVEEIARLHIAQWDAKERIIDWSTTKNGKPHAIPVPDLAAELLESIK
PNNYGWFFPSAFDPSKPVAHNTLYSFMWRQRERGVIPVVTNRDLRRTWKTLAGKAGLSKEIRDRLQNHTLQDVSSKAYDR
WNYMPEKRAAMKQWNSFVRSVLTPDRLTSAA

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49304; Mature: 49173

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPVNGSVIPLISLRESRMPSLTDGAIRRALKQVEQTQKPVTLADGEGRGIGRLILFVR
CCCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEC
PMPTRVIAYWLVQQWRAGARSRKKIGAYPSMSLNQARNIFDRDFADAIQKGRSIKALGDT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
RAGTLGDLFDAYIAHLKSSGKKSWKEAEKGLNKVADTLGRHRPARDIEPHEIVDIIRPIY
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GRGTRSMADHVRGYLRAAFSWGIKSEHDYRHASPRRFGLTKNPAAGIPSEPYVPGNRWLD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EEEFLRLYRWLECPDTPVHPPYTRAVRLLMLTGQRVEEIARLHIAQWDAKERIIDWSTTK
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCC
NGKPHAIPVPDLAAELLESIKPNNYGWFFPSAFDPSKPVAHNTLYSFMWRQRERGVIPVV
CCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
TNRDLRRTWKTLAGKAGLSKEIRDRLQNHTLQDVSSKAYDRWNYMPEKRAAMKQWNSFVR
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SVLTPDRLTSAA
HHHCHHHHHCCC
>Mature Secondary Structure 
TTPVNGSVIPLISLRESRMPSLTDGAIRRALKQVEQTQKPVTLADGEGRGIGRLILFVR
CCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEC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HHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA