| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is map [H]
Identifier: 16126912
GI number: 16126912
Start: 2896325
End: 2897155
Strand: Direct
Name: map [H]
Synonym: CC_2677
Alternate gene names: 16126912
Gene position: 2896325-2897155 (Clockwise)
Preceding gene: 16126911
Following gene: 16126913
Centisome position: 72.1
GC content: 68.23
Gene sequence:
>831_bases ATGACCCTGGATAACGCCCTCGAGATCGAAGCCGAGACCCGCACGGGTCAGATCAAGCTGCACAAGGCCGAGGACTTCGA GGGCATGCGCAAGGCCGGCAAGCTGGCCGCCGAGTGCCTGGATATGCTGATCCCGCACGTGCAGCCGGGCGTGTCGTCCG ACGAGCTGGACCGGCTGGCCCGCGAGTTCATCCTGGACAACGGCGGCCTGCCCGCCTGCCTCTACTATCGCGGCTATCCC AAGACGGTCTGCATCTCGCGCAACCACGTCGTTTGCCACGGCATTCCCGGCGACTGGGCCCTGAAGGAAGGCGACATCGT CAATATCGACGTGACCGCCATTGTCGACGGCTGGCACGGCGACACCTCGCGCATGTACGGCGTCGGCGAAGTGGGCCCCC GCGCCCGCCGCCTGGTCGAGATCACCTATGAGGGCATGCGGCGCGGCCTGGAGGCCGTGAAGCCCGGCGCCACGCTCGGC GACATCGGCCACGCCATCCAGTCCTACGTCGAGGCCCAGCGCTGCAGCGTGGTGCGCGACTTCTGCGGCCATGGCCTGGG CCGCGTGTTCCACGACGCCCCGAACATCCTGCACTTTGGCCGCCCCGGCCAGGGCGCGGTGCTGAAACCCGGCATGTTCT TCACCGTCGAGCCGATGGTGAACCTCGGCAAGCCCGCCGTGAAGGTGCTGAACGACGGCTGGACCGCCGTGACCCGCGAC AAGTCGCTGTCGGCCCAGTGCGAGCACTCGATCGGCGTGACCGAAGACGGCTATGAGGTGTTCACCGCCTCGCCCGCCGG GCTGTTCCAGCCGGCGATCCAGGGCGGCTGA
Upstream 100 bases:
>100_bases ACAGGCGACGTCTATTGAACTTTTGTGCTATGATCGCGACATAGCCCCTTGTAGCAGACCCCTTCGCCGCCCTTCGCGGC GACGCGCGCCCGAGCAAATC
Downstream 100 bases:
>100_bases TCGCGTAAAGCGCGCATTTTTGCGATAGACAATCGGTCTGTTGCCGGTGATCCTGCGGGCATGACCGAGGCTGAAAAGCG CAGGCGATTTCGGCGTTTCA
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTLDNALEIEAETRTGQIKLHKAEDFEGMRKAGKLAAECLDMLIPHVQPGVSSDELDRLAREFILDNGGLPACLYYRGYP KTVCISRNHVVCHGIPGDWALKEGDIVNIDVTAIVDGWHGDTSRMYGVGEVGPRARRLVEITYEGMRRGLEAVKPGATLG DIGHAIQSYVEAQRCSVVRDFCGHGLGRVFHDAPNILHFGRPGQGAVLKPGMFFTVEPMVNLGKPAVKVLNDGWTAVTRD KSLSAQCEHSIGVTEDGYEVFTASPAGLFQPAIQGG
Sequences:
>Translated_276_residues MTLDNALEIEAETRTGQIKLHKAEDFEGMRKAGKLAAECLDMLIPHVQPGVSSDELDRLAREFILDNGGLPACLYYRGYP KTVCISRNHVVCHGIPGDWALKEGDIVNIDVTAIVDGWHGDTSRMYGVGEVGPRARRLVEITYEGMRRGLEAVKPGATLG DIGHAIQSYVEAQRCSVVRDFCGHGLGRVFHDAPNILHFGRPGQGAVLKPGMFFTVEPMVNLGKPAVKVLNDGWTAVTRD KSLSAQCEHSIGVTEDGYEVFTASPAGLFQPAIQGG >Mature_275_residues TLDNALEIEAETRTGQIKLHKAEDFEGMRKAGKLAAECLDMLIPHVQPGVSSDELDRLAREFILDNGGLPACLYYRGYPK TVCISRNHVVCHGIPGDWALKEGDIVNIDVTAIVDGWHGDTSRMYGVGEVGPRARRLVEITYEGMRRGLEAVKPGATLGD IGHAIQSYVEAQRCSVVRDFCGHGLGRVFHDAPNILHFGRPGQGAVLKPGMFFTVEPMVNLGKPAVKVLNDGWTAVTRDK SLSAQCEHSIGVTEDGYEVFTASPAGLFQPAIQGG
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=248, Percent_Identity=44.3548387096774, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI40385867, Length=249, Percent_Identity=35.7429718875502, Blast_Score=172, Evalue=3e-43, Organism=Escherichia coli, GI1786364, Length=247, Percent_Identity=55.0607287449393, Blast_Score=275, Evalue=2e-75, Organism=Caenorhabditis elegans, GI71996291, Length=258, Percent_Identity=39.922480620155, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6323273, Length=262, Percent_Identity=41.2213740458015, Blast_Score=222, Evalue=6e-59, Organism=Drosophila melanogaster, GI21355531, Length=262, Percent_Identity=42.7480916030534, Blast_Score=224, Evalue=6e-59, Organism=Drosophila melanogaster, GI24583427, Length=249, Percent_Identity=39.7590361445783, Blast_Score=194, Evalue=4e-50,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29910; Mature: 29779
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDNALEIEAETRTGQIKLHKAEDFEGMRKAGKLAAECLDMLIPHVQPGVSSDELDRLA CCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH REFILDNGGLPACLYYRGYPKTVCISRNHVVCHGIPGDWALKEGDIVNIDVTAIVDGWHG HHHHHCCCCCCEEEEECCCCCEEEEECCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCC DTSRMYGVGEVGPRARRLVEITYEGMRRGLEAVKPGATLGDIGHAIQSYVEAQRCSVVRD CCHHEEECCCCCHHHHHHHHEEHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FCGHGLGRVFHDAPNILHFGRPGQGAVLKPGMFFTVEPMVNLGKPAVKVLNDGWTAVTRD HHCCCHHHHHHCCCCEEECCCCCCCCEECCCEEEEECCHHHCCCHHHHHHCCCCEEEECC KSLSAQCEHSIGVTEDGYEVFTASPAGLFQPAIQGG CCCCCHHHHCCCCCCCCCEEEECCCCHHHCHHCCCC >Mature Secondary Structure TLDNALEIEAETRTGQIKLHKAEDFEGMRKAGKLAAECLDMLIPHVQPGVSSDELDRLA CCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH REFILDNGGLPACLYYRGYPKTVCISRNHVVCHGIPGDWALKEGDIVNIDVTAIVDGWHG HHHHHCCCCCCEEEEECCCCCEEEEECCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCC DTSRMYGVGEVGPRARRLVEITYEGMRRGLEAVKPGATLGDIGHAIQSYVEAQRCSVVRD CCHHEEECCCCCHHHHHHHHEEHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FCGHGLGRVFHDAPNILHFGRPGQGAVLKPGMFFTVEPMVNLGKPAVKVLNDGWTAVTRD HHCCCHHHHHHCCCCEEECCCCCCCCEECCCEEEEECCHHHCCCHHHHHHCCCCEEEECC KSLSAQCEHSIGVTEDGYEVFTASPAGLFQPAIQGG CCCCCHHHHCCCCCCCCCEEEECCCCHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]