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The map label for this gene is 16126569

Identifier: 16126569

GI number: 16126569

Start: 2533441

End: 2533848

Strand: Direct

Name: 16126569

Synonym: CC_2330

Alternate gene names: NA

Gene position: 2533441-2533848 (Clockwise)

Preceding gene: 16126566

Following gene: 16126570

Centisome position: 63.07

GC content: 62.99

Gene sequence:

>408_bases
ATGAACGATCGACCCGCAGCCGAACAAGCCCATCCCGTTGATCTCTACGTTGGGGCCCGGCTGAGAATTCGTCGCAAGAT
GATGGGTCTTAGCCAGACCCAGGTTGCCGACGCCCTTGGCATCACCTTTCAGCAGATTCAGAAGTACGAGCGGGGCGCCA
ACCGCATCAGCGCCAGCAAGCTCTATGACGCGGCGAAACTGCTTCAGGCGCCGGTGTCATACTTCTTTGAAGGACTCGAA
GATACCGACGGCGGCGTCGATGACGGGTTTGCTCAGCGTATGACCGAGTTCGTGTCGACGCCCGAGGGCCTCGAGCTGGC
CAGCCTCTTCCCGCGTCTCGCCGACCGGCGCCTGCGTCGCCGCGTGGTGGATCTCGTCCGCGCCATGGTGGACGACGACG
CCCCCTGA

Upstream 100 bases:

>100_bases
GTTCCGTGCATCCCCGCGCGTGACGACGCAGCCAAGCTCGGTCTATATCCGTTAAGACTTACGGACAGCCGTTTACCGGT
ATCGAAGGAAATAAACGCGG

Downstream 100 bases:

>100_bases
GGGCCCGCTAGCCCTGTTCTTGGACCTTGCAAGACGGACCGACAGACCCCGCGAACAGTGGGGTCTTTTGGTTTTCAGAG
GAGGAGAATCGTACGCGTCG

Product: Cro/CI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNDRPAAEQAHPVDLYVGARLRIRRKMMGLSQTQVADALGITFQQIQKYERGANRISASKLYDAAKLLQAPVSYFFEGLE
DTDGGVDDGFAQRMTEFVSTPEGLELASLFPRLADRRLRRRVVDLVRAMVDDDAP

Sequences:

>Translated_135_residues
MNDRPAAEQAHPVDLYVGARLRIRRKMMGLSQTQVADALGITFQQIQKYERGANRISASKLYDAAKLLQAPVSYFFEGLE
DTDGGVDDGFAQRMTEFVSTPEGLELASLFPRLADRRLRRRVVDLVRAMVDDDAP
>Mature_135_residues
MNDRPAAEQAHPVDLYVGARLRIRRKMMGLSQTQVADALGITFQQIQKYERGANRISASKLYDAAKLLQAPVSYFFEGLE
DTDGGVDDGFAQRMTEFVSTPEGLELASLFPRLADRRLRRRVVDLVRAMVDDDAP

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15145; Mature: 15145

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRPAAEQAHPVDLYVGARLRIRRKMMGLSQTQVADALGITFQQIQKYERGANRISASK
CCCCCCCCCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYDAAKLLQAPVSYFFEGLEDTDGGVDDGFAQRMTEFVSTPEGLELASLFPRLADRRLRR
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RVVDLVRAMVDDDAP
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDRPAAEQAHPVDLYVGARLRIRRKMMGLSQTQVADALGITFQQIQKYERGANRISASK
CCCCCCCCCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYDAAKLLQAPVSYFFEGLEDTDGGVDDGFAQRMTEFVSTPEGLELASLFPRLADRRLRR
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RVVDLVRAMVDDDAP
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]