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The map label for this gene is ykwD [H]

Identifier: 16126357

GI number: 16126357

Start: 2324438

End: 2325235

Strand: Direct

Name: ykwD [H]

Synonym: CC_2118

Alternate gene names: 16126357

Gene position: 2324438-2325235 (Clockwise)

Preceding gene: 16126355

Following gene: 16126361

Centisome position: 57.87

GC content: 71.93

Gene sequence:

>798_bases
ATGCGGACGATCGCGCGTAGAAGCTTGCTGACCGCCGGCCTGACCCTGGCCGCCTCCCCCGCCCTAGCCGCGCCCGCCGC
GCCCTGGCTCGCCTACGAACGCCGCCTGCGCGCGCTGCTGTCCGATCCCCCCGGCGGCGACTTCGATCCCGCGTTCGAAG
AGGCCCTGCTCGACCTCAACAACCTCTATCGCCGCCGCCAAGGGCCTACCCCACTCGCCTGGGATGAGGGTCTGCGTCTG
GCCGCCCGCGCCCACGCCGCCGACATCGCGGTGACCGGCGTCTTCGAGCACCTCACCCGTGAGGGCTTCTCGCCGGCGGG
ACGTGTGGGCCTGTTCGCGCGCGATCTGGTCGGCGCGCCCGGCGAGAACATCGCCATGCGCCGCAACGCCGCCAGCGCCG
TCACCTACGACCAGATCATGAACCAGTGGAAGACCAGCCCCGGCCACCGCGCCAATCTCCTGGCGCCGGGCTTCACCCAC
GTGGGTTATGGTGTCTTTAGGCAGGGGCCGCGTGTCATCGCCGTCGGCGCCTACGCCGAGGTCAGCGCCCGTCTGGCCGG
TCCCGCGCCTCTGCGCGTGCGCTCGACCGACGAGATCGCCCGCGCCCTATCCTATGCGACGCCGGCGATCCGCCAGTTCT
CGGTCTCTGAACCGGGCGGCGAGGTGCTGACCGCGACCTATCTGGAAGATCGCGCGGCCCGCGCCCTTAAGCCGGGCGCC
TGGCAGCTGCGCCCGCACCTGTCGACAGGCGAGCGCCGCTACCAGGTGGCCTGGGGGCCCGTGTTCGTGCTGGACTAG

Upstream 100 bases:

>100_bases
CCGGCCAGCCATAGGGAACGAACAGGTTTCATGGGCCTTAGGTCTGGTCGCGAGGGGCAGGAGTCAATGCTGGGGCTGAA
GTTAGGCCGTCGGAGATCGA

Downstream 100 bases:

>100_bases
CGCTACTGGGCCACCGCCAGGGCCTCGATGCGGATGTTCACCGCATCCCCGATCGCGCCCGCCCCGATGGTGTGGCCGAA
CGCCTTGCGGCTGATCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRTIARRSLLTAGLTLAASPALAAPAAPWLAYERRLRALLSDPPGGDFDPAFEEALLDLNNLYRRRQGPTPLAWDEGLRL
AARAHAADIAVTGVFEHLTREGFSPAGRVGLFARDLVGAPGENIAMRRNAASAVTYDQIMNQWKTSPGHRANLLAPGFTH
VGYGVFRQGPRVIAVGAYAEVSARLAGPAPLRVRSTDEIARALSYATPAIRQFSVSEPGGEVLTATYLEDRAARALKPGA
WQLRPHLSTGERRYQVAWGPVFVLD

Sequences:

>Translated_265_residues
MRTIARRSLLTAGLTLAASPALAAPAAPWLAYERRLRALLSDPPGGDFDPAFEEALLDLNNLYRRRQGPTPLAWDEGLRL
AARAHAADIAVTGVFEHLTREGFSPAGRVGLFARDLVGAPGENIAMRRNAASAVTYDQIMNQWKTSPGHRANLLAPGFTH
VGYGVFRQGPRVIAVGAYAEVSARLAGPAPLRVRSTDEIARALSYATPAIRQFSVSEPGGEVLTATYLEDRAARALKPGA
WQLRPHLSTGERRYQVAWGPVFVLD
>Mature_265_residues
MRTIARRSLLTAGLTLAASPALAAPAAPWLAYERRLRALLSDPPGGDFDPAFEEALLDLNNLYRRRQGPTPLAWDEGLRL
AARAHAADIAVTGVFEHLTREGFSPAGRVGLFARDLVGAPGENIAMRRNAASAVTYDQIMNQWKTSPGHRANLLAPGFTH
VGYGVFRQGPRVIAVGAYAEVSARLAGPAPLRVRSTDEIARALSYATPAIRQFSVSEPGGEVLTATYLEDRAARALKPGA
WQLRPHLSTGERRYQVAWGPVFVLD

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 28657; Mature: 28657

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIARRSLLTAGLTLAASPALAAPAAPWLAYERRLRALLSDPPGGDFDPAFEEALLDLN
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
NLYRRRQGPTPLAWDEGLRLAARAHAADIAVTGVFEHLTREGFSPAGRVGLFARDLVGAP
HHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
GENIAMRRNAASAVTYDQIMNQWKTSPGHRANLLAPGFTHVGYGVFRQGPRVIAVGAYAE
CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEECHHH
VSARLAGPAPLRVRSTDEIARALSYATPAIRQFSVSEPGGEVLTATYLEDRAARALKPGA
HHHHCCCCCCEEECCHHHHHHHHHHCCHHHHEECCCCCCCCEEEEHHHHHHHHHHCCCCC
WQLRPHLSTGERRYQVAWGPVFVLD
EEECCCCCCCCEEEEEEECEEEEEC
>Mature Secondary Structure
MRTIARRSLLTAGLTLAASPALAAPAAPWLAYERRLRALLSDPPGGDFDPAFEEALLDLN
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
NLYRRRQGPTPLAWDEGLRLAARAHAADIAVTGVFEHLTREGFSPAGRVGLFARDLVGAP
HHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
GENIAMRRNAASAVTYDQIMNQWKTSPGHRANLLAPGFTHVGYGVFRQGPRVIAVGAYAE
CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEECHHH
VSARLAGPAPLRVRSTDEIARALSYATPAIRQFSVSEPGGEVLTATYLEDRAARALKPGA
HHHHCCCCCCEEECCHHHHHHHHHHCCHHHHEECCCCCCCCEEEEHHHHHHHHHHCCCCC
WQLRPHLSTGERRYQVAWGPVFVLD
EEECCCCCCCCEEEEEEECEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]