| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is hemK [C]
Identifier: 16126353
GI number: 16126353
Start: 2322597
End: 2323340
Strand: Direct
Name: hemK [C]
Synonym: CC_2114
Alternate gene names: 16126353
Gene position: 2322597-2323340 (Clockwise)
Preceding gene: 16126349
Following gene: 16126355
Centisome position: 57.82
GC content: 69.89
Gene sequence:
>744_bases TTGAACGACTTAGGTGTGACCGAGGATCGGGTTCTGGGCGGCCGCGTAAGGCTGCGTCAAGCGCCGGACGGATACCGGCC GGGCATGGACGCAGCCCTGCTGGCGGCGACGTGCGACGCCCTGCCCGGGCAAAGGGTTCTGGAGCCGGGCTGCGGGGTCG GCGGCGCCTTGCTGGCGGCGGCGACTCGCCGCCCCGAGGCGATCTTCCAGGGCGTCGAGCGGGATGAGACCGCCGCGTCT CTCGCGGCCGAGAACGTGGCCCTGAACGGCTTGACGTCGCGCGTCGCTATCGCGCAGGGCGATGTCGAGGCCGGCTTTCG CGCGCTCGGCCTGCCCGTCTTCGACGCCGTGATGGCCAATCCGCCCTATTTCGATGACCCGAGCGCGCTGCGTGCGCCCT CGCCCGCCAAGAGCGGCGCCTGGATGGCGGATGGTGGTCTGGCGGCCTGGACCGCGTTCTGCCTCAAGGCTGTGCGTGAA GGGGGGACCATCACGCTGATCCATCGCGCCGACCGATTGGCCGACATCCTCTCCCTCCTCGCGCCCAAGGCCGGTTCGTT TCGGATTCGGCCGGTCGCGCCCTTCGCGGACGCGGCGGCCAAACGTGTGATCGTGCGCGCGATCAAGACCGGCAAGGCGC CTTTGGTCCTGTTGCCGCCGCTGGTCATGCATGATCGCGACGGGGGAAAACACTCGGCTCAGGCGGAAGCCATTCTGCGT GGCGAGGCCGACCTGGCCTGGTAG
Upstream 100 bases:
>100_bases AAAACCATGGTCTCCTTAAAGCGGCCCCCCACGAACCATTGCGAGGGACAATGGTGGCGGGATAGGTCAGGGTCAAGGCG AGCACAAGGCCTCACTAGCA
Downstream 100 bases:
>100_bases GCGCCCCTGATGATCAGGGACGCGGCTGAGGCGGCGGGATCGTCGCCCCGCTGTCCTGAGTCTGGATCGATTTCAGATAA GCCACGATGGCGCTGACATC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; Methyltransferase Type; O-Methyltransferase; Methyltransferase Small Domain Family; SAM-Dependent Methyltransferase; O-Methyltransferase-Like Protein; Methyltransferase Protein; Methyltransferase Small Domain Protein; RNA Methylase; Methyltransferase Small Domain-Containing Protein; RNA MethylaseMethyltransferase Small; N-6 Adenine-Specific DNA Methylase
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MNDLGVTEDRVLGGRVRLRQAPDGYRPGMDAALLAATCDALPGQRVLEPGCGVGGALLAAATRRPEAIFQGVERDETAAS LAAENVALNGLTSRVAIAQGDVEAGFRALGLPVFDAVMANPPYFDDPSALRAPSPAKSGAWMADGGLAAWTAFCLKAVRE GGTITLIHRADRLADILSLLAPKAGSFRIRPVAPFADAAAKRVIVRAIKTGKAPLVLLPPLVMHDRDGGKHSAQAEAILR GEADLAW
Sequences:
>Translated_247_residues MNDLGVTEDRVLGGRVRLRQAPDGYRPGMDAALLAATCDALPGQRVLEPGCGVGGALLAAATRRPEAIFQGVERDETAAS LAAENVALNGLTSRVAIAQGDVEAGFRALGLPVFDAVMANPPYFDDPSALRAPSPAKSGAWMADGGLAAWTAFCLKAVRE GGTITLIHRADRLADILSLLAPKAGSFRIRPVAPFADAAAKRVIVRAIKTGKAPLVLLPPLVMHDRDGGKHSAQAEAILR GEADLAW >Mature_247_residues MNDLGVTEDRVLGGRVRLRQAPDGYRPGMDAALLAATCDALPGQRVLEPGCGVGGALLAAATRRPEAIFQGVERDETAAS LAAENVALNGLTSRVAIAQGDVEAGFRALGLPVFDAVMANPPYFDDPSALRAPSPAKSGAWMADGGLAAWTAFCLKAVRE GGTITLIHRADRLADILSLLAPKAGSFRIRPVAPFADAAAKRVIVRAIKTGKAPLVLLPPLVMHDRDGGKHSAQAEAILR GEADLAW
Specific function: Methylates The Translation Termination Release Factor Rf1 On Gln-235 And Rf2 On Gln-252. [C]
COG id: COG4123
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.- [C]
Molecular weight: Translated: 25729; Mature: 25729
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLGVTEDRVLGGRVRLRQAPDGYRPGMDAALLAATCDALPGQRVLEPGCGVGGALLAA CCCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHH ATRRPEAIFQGVERDETAASLAAENVALNGLTSRVAIAQGDVEAGFRALGLPVFDAVMAN HCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHEEEECCCHHHHHHHHCCHHHHHHHCC PPYFDDPSALRAPSPAKSGAWMADGGLAAWTAFCLKAVREGGTITLIHRADRLADILSLL CCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH APKAGSFRIRPVAPFADAAAKRVIVRAIKTGKAPLVLLPPLVMHDRDGGKHSAQAEAILR CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCCHHHHHHHHC GEADLAW CCCCCCC >Mature Secondary Structure MNDLGVTEDRVLGGRVRLRQAPDGYRPGMDAALLAATCDALPGQRVLEPGCGVGGALLAA CCCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHH ATRRPEAIFQGVERDETAASLAAENVALNGLTSRVAIAQGDVEAGFRALGLPVFDAVMAN HCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHEEEECCCHHHHHHHHCCHHHHHHHCC PPYFDDPSALRAPSPAKSGAWMADGGLAAWTAFCLKAVREGGTITLIHRADRLADILSLL CCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH APKAGSFRIRPVAPFADAAAKRVIVRAIKTGKAPLVLLPPLVMHDRDGGKHSAQAEAILR CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCCHHHHHHHHC GEADLAW CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA