Click here to switch to the map view.

The map label for this gene is 16126319

Identifier: 16126319

GI number: 16126319

Start: 2290251

End: 2290919

Strand: Direct

Name: 16126319

Synonym: CC_2080

Alternate gene names: NA

Gene position: 2290251-2290919 (Clockwise)

Preceding gene: 16126317

Following gene: 16126320

Centisome position: 57.01

GC content: 66.67

Gene sequence:

>669_bases
GTGAGTCCGACGACCGACGCCGCCGCTTCGCATGAAGTCGACGCGAGCGAGAGCGAAGCCGCCACCAAGAACCTGGTGTT
CGTCGCCGCCGAACGCCTGTTCGCGCTGCATGGCTTTCAGAACGTTTCGGTGCGCGACATCACGGCCGCCGCGGGCGTGA
ATCTGGCCTCGGTGAACTATCACTTCGGCTCCAAGGACGCGCTGCTGTTCGAGATCTTCAAGCGGCGCACGGCCGAGCTC
AATCGCGAGCGCGCCAAGATGCTGCATGAGGCCAACGACCGGAACGTCGGGAGCCCGCCCCTGCGCGAGATCCTGGCGGC
CCTGCTGACCCCGCCGCTGCGCTGGCTGGCGCCCGACCACGAGCGCCGCATTTCGCTGCAGTTCCTGATCCGCGCCCGCA
GCGAAGGCACCGACGAGATTCGCCAGGTGCTGAAGACCGACGTGTCTCACCTGCGCCGCTTCTCGGACGCCCTGCTGCGC
GCCCGCCCTGACCTGTCGCCCGAAGAGGTCTACTGGCGGCTGCACTTCACGCTGGGCATGCTGCACAATAATCGCTTCGC
GGAGTTCGATCGGCTGAACGTGCTATCCGAAGGGCAGACCAGCGAAGCCGATGTCGTGGCCTTGCTGGATCGCATGCTGA
GCTTCGCCGAGGCCGGCTTCCGCGCCTGA

Upstream 100 bases:

>100_bases
CCTAAACGCGAACGTCGTTACGCGCTACAGGGACGATCTTGACGCTTGCGCCAAATTCGAACGCCCGTAAGACTTCCCTG
CGGGTAAAGGGGAATCTGTA

Downstream 100 bases:

>100_bases
TCACACGCCTAACGGTGAACAGGCGCCGGTGCGCAGGCGACGTCGCCTGCTGCGGGACGTCCGCTTGTCGTCCACCGCCC
CCAGTACGGCAGCGCGAATC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcriptional Regulator PsrA; TetR Family Regulatory Protein; Regulatory Protein Tetr; Transcription Regulator Protein; PsrA Protein; TetR Family Transcription Factor; TRANSCRIPTIONal REGULATOR TetR Family; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSPTTDAAASHEVDASESEAATKNLVFVAAERLFALHGFQNVSVRDITAAAGVNLASVNYHFGSKDALLFEIFKRRTAEL
NRERAKMLHEANDRNVGSPPLREILAALLTPPLRWLAPDHERRISLQFLIRARSEGTDEIRQVLKTDVSHLRRFSDALLR
ARPDLSPEEVYWRLHFTLGMLHNNRFAEFDRLNVLSEGQTSEADVVALLDRMLSFAEAGFRA

Sequences:

>Translated_222_residues
MSPTTDAAASHEVDASESEAATKNLVFVAAERLFALHGFQNVSVRDITAAAGVNLASVNYHFGSKDALLFEIFKRRTAEL
NRERAKMLHEANDRNVGSPPLREILAALLTPPLRWLAPDHERRISLQFLIRARSEGTDEIRQVLKTDVSHLRRFSDALLR
ARPDLSPEEVYWRLHFTLGMLHNNRFAEFDRLNVLSEGQTSEADVVALLDRMLSFAEAGFRA
>Mature_221_residues
SPTTDAAASHEVDASESEAATKNLVFVAAERLFALHGFQNVSVRDITAAAGVNLASVNYHFGSKDALLFEIFKRRTAELN
RERAKMLHEANDRNVGSPPLREILAALLTPPLRWLAPDHERRISLQFLIRARSEGTDEIRQVLKTDVSHLRRFSDALLRA
RPDLSPEEVYWRLHFTLGMLHNNRFAEFDRLNVLSEGQTSEADVVALLDRMLSFAEAGFRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25007; Mature: 24875

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTTDAAASHEVDASESEAATKNLVFVAAERLFALHGFQNVSVRDITAAAGVNLASVNY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEE
HFGSKDALLFEIFKRRTAELNRERAKMLHEANDRNVGSPPLREILAALLTPPLRWLAPDH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCH
ERRISLQFLIRARSEGTDEIRQVLKTDVSHLRRFSDALLRARPDLSPEEVYWRLHFTLGM
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEHHHHHHH
LHNNRFAEFDRLNVLSEGQTSEADVVALLDRMLSFAEAGFRA
HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SPTTDAAASHEVDASESEAATKNLVFVAAERLFALHGFQNVSVRDITAAAGVNLASVNY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEE
HFGSKDALLFEIFKRRTAELNRERAKMLHEANDRNVGSPPLREILAALLTPPLRWLAPDH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCH
ERRISLQFLIRARSEGTDEIRQVLKTDVSHLRRFSDALLRARPDLSPEEVYWRLHFTLGM
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEHHHHHHH
LHNNRFAEFDRLNVLSEGQTSEADVVALLDRMLSFAEAGFRA
HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA