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The map label for this gene is yebA [C]

Identifier: 16126115

GI number: 16126115

Start: 2064387

End: 2065538

Strand: Direct

Name: yebA [C]

Synonym: CC_1872

Alternate gene names: 16126115

Gene position: 2064387-2065538 (Clockwise)

Preceding gene: 16126114

Following gene: 16126116

Centisome position: 51.39

GC content: 66.23

Gene sequence:

>1152_bases
ATGGCGATCAAACGCTTCAAGCGACTGCGGCAATCTCTGGAAGCCCTTTTTCCTGAACGGCACATCTACATCCGCTCCGG
CGGCGAGATGCGCGGCTATGTCTTCTCGACCAACAAGCAGCTCCTGGGCGCCGCCGGCGTGGCCGTCGGCGCGCTGTGGA
TGGGCGTCTGCACGGCAGCGATGATGGTCAACGCCCTGGCGGTCAGCTCGACCGACCAGCAGGTCATCAAGCAAAAAGCT
TACTATGAGCGCCTGAACGCTGATCGTCAGGCCCGCCTGAACAGCGCTGTGGCGCAACTCTCCGCCACCAATGGCTCGCT
GGAAGAACTCGCCGCGTCGGTCGAAAAGCGCCACGCCGCGCTCGCCCTCCTGGTCTCTGATTTCAAGGGCGTACCCGGCG
CCGCCGAAGCGCTGCAGGTCGCCAAGCCTCGCCTCCTCGCCGCCAGTCCGGTGCAACGGGTGCAGGCCACCCGGATGGAC
CAGGAGCGCCTGATCGACGCCGCCGAGAGCTTCGCCAAGAGCCGCGCCGAGCGCCTGCGCCTGGCCATGCGGATGGCGGG
CCTGGATGCTGGAAACTATACCGGCCGTGGCGTCTCGCTGGGCGGCCCGCTGATCGAGGCCAAGGATCCTCGCGCCCTCG
CCGCTGTGCTGGACGTGGACGAAGAGTTCGCCACCCGCATCCAACGCGCCGCGAACGACATGTCGGACATGCGATTGCTC
GGCGCGGCGGCCAAGAAGCTGCCCTTCTATCGCCCGACCAGCAATCCGGCCCTGTCGTCCAGCTATGGCGTGCGGTTTGA
TCCGTTCACCCGACGCCCCGCCTTCCATTCCGGCCTGGACTTCCCAGGCGGCTATCACACGCCGATCATGGCCACCGCTC
CAGGCGTGATCTCGTTCACCGGCGTGCGCTCTGGCTATGGCAAGACGGTCGAGATCGACCACGGCGGCGGCTTCAAGACC
CGCTACGCCCACCTCGCCGCCATCAGCGTTCGTGTCGGACAACGCGTGGCCATCGGCTCGCGCGTCGGCGGCATGGGCTC
GACAGGCCGCTCGACCGGCCCGCACCTGCACTACGAAGTCTGGGTCAACGGCAAGGCCCAGAACCCCAACCGCTTCTTGA
AGGCTGGTGAGTATGTTCAGCAAGCAAGCTAA

Upstream 100 bases:

>100_bases
ATTTTATGACTCGCGCTCCCTTCGGGCGCGAAGACGCTTGCGCGCTTCCGTTTTATCGTTGCATATCGCCGGGACCTGAA
ACGGGGGGTTTCCTGGGGCG

Downstream 100 bases:

>100_bases
ATCGAACAACAAGGCCCCGGCCCGCATCGAGCCGCTGCCGACGCCCATGGCCGCCACCCCGGCCGAGCCCGCGCGTCGCG
CACCGCCCAAGGTCGCCTCG

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MAIKRFKRLRQSLEALFPERHIYIRSGGEMRGYVFSTNKQLLGAAGVAVGALWMGVCTAAMMVNALAVSSTDQQVIKQKA
YYERLNADRQARLNSAVAQLSATNGSLEELAASVEKRHAALALLVSDFKGVPGAAEALQVAKPRLLAASPVQRVQATRMD
QERLIDAAESFAKSRAERLRLAMRMAGLDAGNYTGRGVSLGGPLIEAKDPRALAAVLDVDEEFATRIQRAANDMSDMRLL
GAAAKKLPFYRPTSNPALSSSYGVRFDPFTRRPAFHSGLDFPGGYHTPIMATAPGVISFTGVRSGYGKTVEIDHGGGFKT
RYAHLAAISVRVGQRVAIGSRVGGMGSTGRSTGPHLHYEVWVNGKAQNPNRFLKAGEYVQQAS

Sequences:

>Translated_383_residues
MAIKRFKRLRQSLEALFPERHIYIRSGGEMRGYVFSTNKQLLGAAGVAVGALWMGVCTAAMMVNALAVSSTDQQVIKQKA
YYERLNADRQARLNSAVAQLSATNGSLEELAASVEKRHAALALLVSDFKGVPGAAEALQVAKPRLLAASPVQRVQATRMD
QERLIDAAESFAKSRAERLRLAMRMAGLDAGNYTGRGVSLGGPLIEAKDPRALAAVLDVDEEFATRIQRAANDMSDMRLL
GAAAKKLPFYRPTSNPALSSSYGVRFDPFTRRPAFHSGLDFPGGYHTPIMATAPGVISFTGVRSGYGKTVEIDHGGGFKT
RYAHLAAISVRVGQRVAIGSRVGGMGSTGRSTGPHLHYEVWVNGKAQNPNRFLKAGEYVQQAS
>Mature_382_residues
AIKRFKRLRQSLEALFPERHIYIRSGGEMRGYVFSTNKQLLGAAGVAVGALWMGVCTAAMMVNALAVSSTDQQVIKQKAY
YERLNADRQARLNSAVAQLSATNGSLEELAASVEKRHAALALLVSDFKGVPGAAEALQVAKPRLLAASPVQRVQATRMDQ
ERLIDAAESFAKSRAERLRLAMRMAGLDAGNYTGRGVSLGGPLIEAKDPRALAAVLDVDEEFATRIQRAANDMSDMRLLG
AAAKKLPFYRPTSNPALSSSYGVRFDPFTRRPAFHSGLDFPGGYHTPIMATAPGVISFTGVRSGYGKTVEIDHGGGFKTR
YAHLAAISVRVGQRVAIGSRVGGMGSTGRSTGPHLHYEVWVNGKAQNPNRFLKAGEYVQQAS

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=113, Percent_Identity=44.2477876106195, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=37.3737373737374, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 41252; Mature: 41121

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKRFKRLRQSLEALFPERHIYIRSGGEMRGYVFSTNKQLLGAAGVAVGALWMGVCTAA
CCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
MMVNALAVSSTDQQVIKQKAYYERLNADRQARLNSAVAQLSATNGSLEELAASVEKRHAA
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LALLVSDFKGVPGAAEALQVAKPRLLAASPVQRVQATRMDQERLIDAAESFAKSRAERLR
HHHHHHHHCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LAMRMAGLDAGNYTGRGVSLGGPLIEAKDPRALAAVLDVDEEFATRIQRAANDMSDMRLL
HHHHHHCCCCCCCCCCCEECCCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GAAAKKLPFYRPTSNPALSSSYGVRFDPFTRRPAFHSGLDFPGGYHTPIMATAPGVISFT
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEE
GVRSGYGKTVEIDHGGGFKTRYAHLAAISVRVGQRVAIGSRVGGMGSTGRSTGPHLHYEV
CCCCCCCCEEEEECCCCCCHHHHHHHHEEHHHCCEEEECCCCCCCCCCCCCCCCEEEEEE
WVNGKAQNPNRFLKAGEYVQQAS
EECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIKRFKRLRQSLEALFPERHIYIRSGGEMRGYVFSTNKQLLGAAGVAVGALWMGVCTAA
CHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
MMVNALAVSSTDQQVIKQKAYYERLNADRQARLNSAVAQLSATNGSLEELAASVEKRHAA
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LALLVSDFKGVPGAAEALQVAKPRLLAASPVQRVQATRMDQERLIDAAESFAKSRAERLR
HHHHHHHHCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LAMRMAGLDAGNYTGRGVSLGGPLIEAKDPRALAAVLDVDEEFATRIQRAANDMSDMRLL
HHHHHHCCCCCCCCCCCEECCCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GAAAKKLPFYRPTSNPALSSSYGVRFDPFTRRPAFHSGLDFPGGYHTPIMATAPGVISFT
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEE
GVRSGYGKTVEIDHGGGFKTRYAHLAAISVRVGQRVAIGSRVGGMGSTGRSTGPHLHYEV
CCCCCCCCEEEEECCCCCCHHHHHHHHEEHHHCCEEEECCCCCCCCCCCCCCCCEEEEEE
WVNGKAQNPNRFLKAGEYVQQAS
EECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]