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The map label for this gene is 16125887

Identifier: 16125887

GI number: 16125887

Start: 1818776

End: 1819354

Strand: Direct

Name: 16125887

Synonym: CC_1641

Alternate gene names: NA

Gene position: 1818776-1819354 (Clockwise)

Preceding gene: 16125882

Following gene: 16125888

Centisome position: 45.28

GC content: 66.32

Gene sequence:

>579_bases
ATGCCAGACACGCTTCAGCTTGGCCTGCCGGGCCTTGAGTCGCCCACGCCGACGGATCGGCTGATGTTCCTGCTGTATCC
TGACCGGCGGACGGCCGAGCGCATCGCGCTGGAGGCCGCGCGACTGAAACGGGCGTCCGGACTGGCCGGTCCGCTTCTCC
AGACCGGCCGCCTCCATATCACCCTGCATCATCTGGGCGACTATGCGGGCCTGCCCAACGACATTGTCAGCAAAGGTCGC
TTCGCCGGCGACGCCGTCGAGGCCGGGGCGTTCGAGGTGGTCTTCGATCGGGCCGCCAGTTTCGCCAATCGCTCCGGCAA
CAACCCCTTCACGTTGCAGGGCGGGGAGGGGATTCAGCCGCTCATCGCCTTCCAGAAAGCGCTGGGAGAGAAGATGGCGG
GCGCCGCGCTTCGACCCGATCGGAGTTTCACGCCGCACATCACCCTGCTCTACGACCGGCAGGTGATGCCGGAGCAGGCG
ATCACGCCCATCAGTTGGACGGTGAGCCGCTTTGCCCTGGTGCAAAGCAAGCTTGGGCGGACCCAGCACATCGTCCTGCG
CGAGTGGGACCTAGGCTGA

Upstream 100 bases:

>100_bases
CGTTTCCGTCAAGTGATCGATTACGCACGTAAACGAAATGTAATGCAGCGTTGGAGGCGTAAGCGAAGCGGCTTAACGCT
CGAGAGCGGAGGAGTCGTAC

Downstream 100 bases:

>100_bases
TCCTGGCCGGCGCGGGGCGGATCAGTCTGTTGCTCTGAGCCGGTTCGATGGCAGGAAGGGGCCAAGCCTCGATTCGACCC
GGCACGGACCTCGTCATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: 2 5' RNA Ligase; Phosphoesterase HXTX; 2-5' RNA Ligase-Like Protein; Ligase; Ligase Protein; 2h Phosphoesterase

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPDTLQLGLPGLESPTPTDRLMFLLYPDRRTAERIALEAARLKRASGLAGPLLQTGRLHITLHHLGDYAGLPNDIVSKGR
FAGDAVEAGAFEVVFDRAASFANRSGNNPFTLQGGEGIQPLIAFQKALGEKMAGAALRPDRSFTPHITLLYDRQVMPEQA
ITPISWTVSRFALVQSKLGRTQHIVLREWDLG

Sequences:

>Translated_192_residues
MPDTLQLGLPGLESPTPTDRLMFLLYPDRRTAERIALEAARLKRASGLAGPLLQTGRLHITLHHLGDYAGLPNDIVSKGR
FAGDAVEAGAFEVVFDRAASFANRSGNNPFTLQGGEGIQPLIAFQKALGEKMAGAALRPDRSFTPHITLLYDRQVMPEQA
ITPISWTVSRFALVQSKLGRTQHIVLREWDLG
>Mature_191_residues
PDTLQLGLPGLESPTPTDRLMFLLYPDRRTAERIALEAARLKRASGLAGPLLQTGRLHITLHHLGDYAGLPNDIVSKGRF
AGDAVEAGAFEVVFDRAASFANRSGNNPFTLQGGEGIQPLIAFQKALGEKMAGAALRPDRSFTPHITLLYDRQVMPEQAI
TPISWTVSRFALVQSKLGRTQHIVLREWDLG

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21010; Mature: 20879

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTLQLGLPGLESPTPTDRLMFLLYPDRRTAERIALEAARLKRASGLAGPLLQTGRLHI
CCCCCCCCCCCCCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHCCCEEEE
TLHHLGDYAGLPNDIVSKGRFAGDAVEAGAFEVVFDRAASFANRSGNNPFTLQGGEGIQP
EEEECCCCCCCCHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHH
LIAFQKALGEKMAGAALRPDRSFTPHITLLYDRQVMPEQAITPISWTVSRFALVQSKLGR
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHCCC
TQHIVLREWDLG
CEEEEEEECCCC
>Mature Secondary Structure 
PDTLQLGLPGLESPTPTDRLMFLLYPDRRTAERIALEAARLKRASGLAGPLLQTGRLHI
CCCCCCCCCCCCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHCCCEEEE
TLHHLGDYAGLPNDIVSKGRFAGDAVEAGAFEVVFDRAASFANRSGNNPFTLQGGEGIQP
EEEECCCCCCCCHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHH
LIAFQKALGEKMAGAALRPDRSFTPHITLLYDRQVMPEQAITPISWTVSRFALVQSKLGR
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHCCC
TQHIVLREWDLG
CEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA