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The map label for this gene is ytfM [H]

Identifier: 16125850

GI number: 16125850

Start: 1771657

End: 1773543

Strand: Direct

Name: ytfM [H]

Synonym: CC_1603

Alternate gene names: 16125850

Gene position: 1771657-1773543 (Clockwise)

Preceding gene: 16125846

Following gene: 16125851

Centisome position: 44.1

GC content: 67.83

Gene sequence:

>1887_bases
TTGAGAAGCGCTCGTGACGGAGGTGGCCGCCATTCCGAACGTGACACGAGCCCAGCCCGCGACTACAGCAGGGGCGGGGG
CGCTTCGCGCGGGGAACGTGATTTGGTGCTTGGGCGGACTACCCTGGCTTTGGCGGCGGTGACCTGGCTCTCGGCCTCGG
CCGCATGGGCCGACGAGCCGATGGCCCAGATCCAGGGTGTCGAGGACCGAGCCCTTCGCGACGCCATCCAGCGCGCCCTG
TCCGATTCCAAACAGCCGCCGCGCAGCCGTTCCGAGGCGCGCCGCCGGGCCCGTCAGGCCGGTGAGGATGCGATCGCCGT
CCTGCGCGCGGAGGGCTACTACGCCTACACCGTCGAGCCGGATGTGACCGAAGGCGATCCGCCGCGCGCCATCGTGAGGA
TCACGCCGGGACCGGCTTTCCTGCTGGCCGATCCCCACATCGACTGGTCGGGCTCGCCGCCGGATGAAGGCGTTCGTCAG
CGCGCCGTTGCGGCGATGCGGCTAACCGAAGGCGAGCCTGGGCGCTCCGCCGACGTGGTCGGCGCCGAGGGCCGGATCGT
CGCCCAGGTGGCCAAGCTCGGCTACGCCGACGTCGCGGCCGAGCCGCGCGAAGTTGTGGTCGACCATGCTGACCGCACGG
TTCGGCCGACCTTCAGGATCATGGCGGGCGAGCTGGTGCGTCTGAACGGCGTTGATGTCGTCACCAAGGGGCGCACCAAT
CCCGAATGGGTCGGCCGTCTCGCGCCCTGGGTGGCCGGTGACGTCTATGATCCGGAAGATGTCGCCGAGCTGGAGCGCCG
ACTGCGCGACACCGCCGTTTATGACTCGATCTCGGTTTCGCTCGCGGGGACCGACAAGGCTTCGGCCGAGGGCTATCGGC
CGGTGGTCGTCACCCTGTCCGACAGGCGGGCGCGCACGATCGAACTGGGCGCGGGCTATTCGACCAGCGAAGGCGCCGGC
GTCGATGCGCGCTGGATCCGCTATAACCGCCAGAAGCGCGCCGACACGACGACATATGCGCTGCGGTTCGCCAAGCTGGA
ACAACGGCTTGGCGCAGAAATCTCACTGCCGCACTGGCGGCGACCGCAGCAGACCTTGAAGCTGAACAGCTCGGTCTTCC
GCAACGACACCGACGCCTACAACGAAACCGGGGCCACGGTCGGCGTCGATCTGACCCGCCGACGCCAGACGACGGCGTAT
CGCACCTTCGGGGTCTCATTCGACCTCTCGCAGACCAAGGAGCAGGTCAATCGCAACGGCTTGATCGCCGGGCGGAAGCT
GAATCTCGCGACCCTGGCGGGTCTGGCCGCCTACGCCTGGGATTTCTCGGACGATATCCTCGATCCCAAACGGGGGTGGC
GCCTGGAGACCCGCGCCGAACCGACTTATGTGGCCGGCGACACCTCGGTCCCGTACTTGAAGCTGGCTGGCCAAGGCTCG
GCCTATCTGCCGTTTGGCAAGCAGGACAGCACCGTGCTGGCGGCGCGCGTCAAGCTGGGCGCGATCTTGGGCGCCGGGCT
TCTCGATGTTCCGGCGTCCCGGCGCTTCTTCTCCGGCGGCGGCGGTTCGGTGCGAGGCTACGCCTATCAGGCGATCGGCC
CGCGCTTGTCGGACAACACGCCACAAGGGGGTATTTCACTGGTCGAGACCTCGTTTGAGGTGCGCCAGAAGATCACCGAT
CGCTGGAGCGGCGTCGCCTTCGTCGATGCGGGCGCTATCGGGACCCATGAAACCCCCCAGCGCGAGGACTTCCGCGCTGG
CGCCGGCCTTGGCGTCCGTTACGATCTGGGCTTTGGACCGATCCGGGCCGACATCGCCGCGCCGCTGGGACGGCGCAAGG
GCGACCCGAAGTTCCAGATCTATCTCAGCATCGGGCAAAGCTTTTGA

Upstream 100 bases:

>100_bases
GTCCCGACTCTAGGGCCTCCACGCGCTCCTGCTTCCCGGATTCGACATCCGCTAAGCGATTGCGCACGACTGCCTATCAT
TTGGGCGCCATTCGGCTGCT

Downstream 100 bases:

>100_bases
GCCGCGACCAGGACAAGCCTGATCTGACCGATACGGTCTCGCAAGCCGCCGAGGCGGCGGGTGAAACGGCGGTGAAGGTC
GTCCGGAAGATCGGCTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MRSARDGGGRHSERDTSPARDYSRGGGASRGERDLVLGRTTLALAAVTWLSASAAWADEPMAQIQGVEDRALRDAIQRAL
SDSKQPPRSRSEARRRARQAGEDAIAVLRAEGYYAYTVEPDVTEGDPPRAIVRITPGPAFLLADPHIDWSGSPPDEGVRQ
RAVAAMRLTEGEPGRSADVVGAEGRIVAQVAKLGYADVAAEPREVVVDHADRTVRPTFRIMAGELVRLNGVDVVTKGRTN
PEWVGRLAPWVAGDVYDPEDVAELERRLRDTAVYDSISVSLAGTDKASAEGYRPVVVTLSDRRARTIELGAGYSTSEGAG
VDARWIRYNRQKRADTTTYALRFAKLEQRLGAEISLPHWRRPQQTLKLNSSVFRNDTDAYNETGATVGVDLTRRRQTTAY
RTFGVSFDLSQTKEQVNRNGLIAGRKLNLATLAGLAAYAWDFSDDILDPKRGWRLETRAEPTYVAGDTSVPYLKLAGQGS
AYLPFGKQDSTVLAARVKLGAILGAGLLDVPASRRFFSGGGGSVRGYAYQAIGPRLSDNTPQGGISLVETSFEVRQKITD
RWSGVAFVDAGAIGTHETPQREDFRAGAGLGVRYDLGFGPIRADIAAPLGRRKGDPKFQIYLSIGQSF

Sequences:

>Translated_628_residues
MRSARDGGGRHSERDTSPARDYSRGGGASRGERDLVLGRTTLALAAVTWLSASAAWADEPMAQIQGVEDRALRDAIQRAL
SDSKQPPRSRSEARRRARQAGEDAIAVLRAEGYYAYTVEPDVTEGDPPRAIVRITPGPAFLLADPHIDWSGSPPDEGVRQ
RAVAAMRLTEGEPGRSADVVGAEGRIVAQVAKLGYADVAAEPREVVVDHADRTVRPTFRIMAGELVRLNGVDVVTKGRTN
PEWVGRLAPWVAGDVYDPEDVAELERRLRDTAVYDSISVSLAGTDKASAEGYRPVVVTLSDRRARTIELGAGYSTSEGAG
VDARWIRYNRQKRADTTTYALRFAKLEQRLGAEISLPHWRRPQQTLKLNSSVFRNDTDAYNETGATVGVDLTRRRQTTAY
RTFGVSFDLSQTKEQVNRNGLIAGRKLNLATLAGLAAYAWDFSDDILDPKRGWRLETRAEPTYVAGDTSVPYLKLAGQGS
AYLPFGKQDSTVLAARVKLGAILGAGLLDVPASRRFFSGGGGSVRGYAYQAIGPRLSDNTPQGGISLVETSFEVRQKITD
RWSGVAFVDAGAIGTHETPQREDFRAGAGLGVRYDLGFGPIRADIAAPLGRRKGDPKFQIYLSIGQSF
>Mature_628_residues
MRSARDGGGRHSERDTSPARDYSRGGGASRGERDLVLGRTTLALAAVTWLSASAAWADEPMAQIQGVEDRALRDAIQRAL
SDSKQPPRSRSEARRRARQAGEDAIAVLRAEGYYAYTVEPDVTEGDPPRAIVRITPGPAFLLADPHIDWSGSPPDEGVRQ
RAVAAMRLTEGEPGRSADVVGAEGRIVAQVAKLGYADVAAEPREVVVDHADRTVRPTFRIMAGELVRLNGVDVVTKGRTN
PEWVGRLAPWVAGDVYDPEDVAELERRLRDTAVYDSISVSLAGTDKASAEGYRPVVVTLSDRRARTIELGAGYSTSEGAG
VDARWIRYNRQKRADTTTYALRFAKLEQRLGAEISLPHWRRPQQTLKLNSSVFRNDTDAYNETGATVGVDLTRRRQTTAY
RTFGVSFDLSQTKEQVNRNGLIAGRKLNLATLAGLAAYAWDFSDDILDPKRGWRLETRAEPTYVAGDTSVPYLKLAGQGS
AYLPFGKQDSTVLAARVKLGAILGAGLLDVPASRRFFSGGGGSVRGYAYQAIGPRLSDNTPQGGISLVETSFEVRQKITD
RWSGVAFVDAGAIGTHETPQREDFRAGAGLGVRYDLGFGPIRADIAAPLGRRKGDPKFQIYLSIGQSF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=133, Percent_Identity=35.3383458646617, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 68204; Mature: 68204

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSARDGGGRHSERDTSPARDYSRGGGASRGERDLVLGRTTLALAAVTWLSASAAWADEP
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCC
MAQIQGVEDRALRDAIQRALSDSKQPPRSRSEARRRARQAGEDAIAVLRAEGYYAYTVEP
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCEEEEEECC
DVTEGDPPRAIVRITPGPAFLLADPHIDWSGSPPDEGVRQRAVAAMRLTEGEPGRSADVV
CCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCEE
GAEGRIVAQVAKLGYADVAAEPREVVVDHADRTVRPTFRIMAGELVRLNGVDVVTKGRTN
CCCCHHHHHHHHCCCHHHCCCCHHHHHCCCCCCCCCHHHEECCCEEEECCEEEEECCCCC
PEWVGRLAPWVAGDVYDPEDVAELERRLRDTAVYDSISVSLAGTDKASAEGYRPVVVTLS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEC
DRRARTIELGAGYSTSEGAGVDARWIRYNRQKRADTTTYALRFAKLEQRLGAEISLPHWR
CCCEEEEEECCCCCCCCCCCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCEECCCCCC
RPQQTLKLNSSVFRNDTDAYNETGATVGVDLTRRRQTTAYRTFGVSFDLSQTKEQVNRNG
CCHHHHHHCHHHHCCCCCCCCCCCCEEEEEEHHCHHHHEEEEECEEECHHHHHHHHCCCC
LIAGRKLNLATLAGLAAYAWDFSDDILDPKRGWRLETRAEPTYVAGDTSVPYLKLAGQGS
EEECCEECHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCEEEEECCCC
AYLPFGKQDSTVLAARVKLGAILGAGLLDVPASRRFFSGGGGSVRGYAYQAIGPRLSDNT
EECCCCCCCCEEEEHHHHHHHHHCCCHHCCCCCCCEECCCCCCCCCEEEEECCCCCCCCC
PQGGISLVETSFEVRQKITDRWSGVAFVDAGAIGTHETPQREDFRAGAGLGVRYDLGFGP
CCCCCEEEHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHCCCCCCCEEEECCCCC
IRADIAAPLGRRKGDPKFQIYLSIGQSF
HHHHHHHHHHCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MRSARDGGGRHSERDTSPARDYSRGGGASRGERDLVLGRTTLALAAVTWLSASAAWADEP
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCC
MAQIQGVEDRALRDAIQRALSDSKQPPRSRSEARRRARQAGEDAIAVLRAEGYYAYTVEP
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCEEEEEECC
DVTEGDPPRAIVRITPGPAFLLADPHIDWSGSPPDEGVRQRAVAAMRLTEGEPGRSADVV
CCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCEE
GAEGRIVAQVAKLGYADVAAEPREVVVDHADRTVRPTFRIMAGELVRLNGVDVVTKGRTN
CCCCHHHHHHHHCCCHHHCCCCHHHHHCCCCCCCCCHHHEECCCEEEECCEEEEECCCCC
PEWVGRLAPWVAGDVYDPEDVAELERRLRDTAVYDSISVSLAGTDKASAEGYRPVVVTLS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEC
DRRARTIELGAGYSTSEGAGVDARWIRYNRQKRADTTTYALRFAKLEQRLGAEISLPHWR
CCCEEEEEECCCCCCCCCCCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCEECCCCCC
RPQQTLKLNSSVFRNDTDAYNETGATVGVDLTRRRQTTAYRTFGVSFDLSQTKEQVNRNG
CCHHHHHHCHHHHCCCCCCCCCCCCEEEEEEHHCHHHHEEEEECEEECHHHHHHHHCCCC
LIAGRKLNLATLAGLAAYAWDFSDDILDPKRGWRLETRAEPTYVAGDTSVPYLKLAGQGS
EEECCEECHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCEEEEECCCC
AYLPFGKQDSTVLAARVKLGAILGAGLLDVPASRRFFSGGGGSVRGYAYQAIGPRLSDNT
EECCCCCCCCEEEEHHHHHHHHHCCCHHCCCCCCCEECCCCCCCCCEEEEECCCCCCCCC
PQGGISLVETSFEVRQKITDRWSGVAFVDAGAIGTHETPQREDFRAGAGLGVRYDLGFGP
CCCCCEEEHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHCCCCCCCEEEECCCCC
IRADIAAPLGRRKGDPKFQIYLSIGQSF
HHHHHHHHHHCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]