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The map label for this gene is ygiK [H]

Identifier: 16125697

GI number: 16125697

Start: 1598338

End: 1599618

Strand: Direct

Name: ygiK [H]

Synonym: CC_1448

Alternate gene names: 16125697

Gene position: 1598338-1599618 (Clockwise)

Preceding gene: 16125696

Following gene: 16125701

Centisome position: 39.79

GC content: 65.18

Gene sequence:

>1281_bases
ATGGAACTGACCCTTCTGCTCGGGCTGCTGGCCCTTCTGCTGATCATCGGCGTGCCCGTGGCCTTCGCTCTCGGCCTGGC
GTCGCTTGTGACCTTCATCTTCATGGACATCGCACCGGTGGTCGCCTTCCAGCGGATCGCCACAGGCGTGAACGTCTTCT
CGCTGATGGCCATTCCGTTCTTCATCTTCGCCGGGGACTTGATGCAGCAGGCGGGGATCGCCGAACGGCTGGTCCGGGTC
GCCGACGCCGCCATGGGCCGGATTCGCGGCGGACTGGGCGTCGTCGACGTGGGCGCGTCGATGATGTTCGGCGGCGTGTC
GGGATCGGCCGTCGCCTCGGTCTCGGCCCTCGGCTCGACCCTCATCCCGCTGATGAAGGAAAAAGGCTATGACGCCGACT
ATGCGGTGAATGTCACCTCCACCTCGGCGATCCTCGGTATCCTGATCCCGCCGTCGCACAACATGATCATCTATGCGGCG
GCGGCCGGCGTGTCGGTCTCGGTCGCGGATTTGTTTCTGGCCGGCGTCCTGCCCGGCATCCTGACCGGTATCTTTCTGGC
CGCCGCAGCCTGGATCATCGCCGTGAGGCGGGGCTATCCGAAGGGCGAGTTTCCGGGCTGGCCGGCCTTCGCCGCCGCCT
TCGCCTCCGCCTTGCCGGGCCTGCTGACCGCCGTGATCATCTTCGGTGGCGTTCTGGGCGGGGTCTTCACCCCGACCGAA
AGCTCGGCCGTCGCGGTGATCTACACCCTCGTGATCGCCGTGATCGTCTATCGGACGCTGGGCTTCCGGGGCTTCACGAC
GGCCGCTCAGAACGCGGTCAAGACCACCGCCATGGTCATGTTGATCATCGGTTCGGCGGCCGCCTTCGGCTGGTTGCTGG
CCCTGCTGGAAGCTCCGGAACAGCTGGCGACCCTGTTGCAGACCCTGACCGACAATCCGATCCTGATCCTGCTGCTGATC
AACCTGATCCTGTTGATCCTCGGGACTTTCATGGACATGGCGCCGCTGATCGTCATCACCAGCCCGATCTTCCTTCCGGT
CGCCATGGCGACTGGGATGGACCCGGTCCAGTTCGGCATCATGATGATGCTGAACCTCGGGATCGGCCTGGTCACCCCGC
CCGTAGGGTCGGTGCTGTTCGTGGGATGCGCGGTCGGCAAGATCAAGGTCGAGCAGGCGGTCCGCACCATCTGGCCCTTC
TACCTGGCTCTGTTCGCCGCCTTGATGGCGATCACCTTCGTTCCCGCCCTGACCCTGACCCTGCCGGGCCTCGCCGGTTG
A

Upstream 100 bases:

>100_bases
GGGCCGCCTATCTGCCGCTGCCGATCGCGGGGTGGATGAGCGTTTTCTTCGCACTGGAACATCTGATTTGTGAGGCCCGG
GGCCGGAAAGTCGAACCGCT

Downstream 100 bases:

>100_bases
TCCGCCGGTCATCGGGCTTGCTGGTTGGGCTGCTGGATGACGGGAATGCGGCGGCAGCGCACGCTTGTTTGGACCGTTCG
TCCTCGGGCTGGGCTCCGGC

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MELTLLLGLLALLLIIGVPVAFALGLASLVTFIFMDIAPVVAFQRIATGVNVFSLMAIPFFIFAGDLMQQAGIAERLVRV
ADAAMGRIRGGLGVVDVGASMMFGGVSGSAVASVSALGSTLIPLMKEKGYDADYAVNVTSTSAILGILIPPSHNMIIYAA
AAGVSVSVADLFLAGVLPGILTGIFLAAAAWIIAVRRGYPKGEFPGWPAFAAAFASALPGLLTAVIIFGGVLGGVFTPTE
SSAVAVIYTLVIAVIVYRTLGFRGFTTAAQNAVKTTAMVMLIIGSAAAFGWLLALLEAPEQLATLLQTLTDNPILILLLI
NLILLILGTFMDMAPLIVITSPIFLPVAMATGMDPVQFGIMMMLNLGIGLVTPPVGSVLFVGCAVGKIKVEQAVRTIWPF
YLALFAALMAITFVPALTLTLPGLAG

Sequences:

>Translated_426_residues
MELTLLLGLLALLLIIGVPVAFALGLASLVTFIFMDIAPVVAFQRIATGVNVFSLMAIPFFIFAGDLMQQAGIAERLVRV
ADAAMGRIRGGLGVVDVGASMMFGGVSGSAVASVSALGSTLIPLMKEKGYDADYAVNVTSTSAILGILIPPSHNMIIYAA
AAGVSVSVADLFLAGVLPGILTGIFLAAAAWIIAVRRGYPKGEFPGWPAFAAAFASALPGLLTAVIIFGGVLGGVFTPTE
SSAVAVIYTLVIAVIVYRTLGFRGFTTAAQNAVKTTAMVMLIIGSAAAFGWLLALLEAPEQLATLLQTLTDNPILILLLI
NLILLILGTFMDMAPLIVITSPIFLPVAMATGMDPVQFGIMMMLNLGIGLVTPPVGSVLFVGCAVGKIKVEQAVRTIWPF
YLALFAALMAITFVPALTLTLPGLAG
>Mature_426_residues
MELTLLLGLLALLLIIGVPVAFALGLASLVTFIFMDIAPVVAFQRIATGVNVFSLMAIPFFIFAGDLMQQAGIAERLVRV
ADAAMGRIRGGLGVVDVGASMMFGGVSGSAVASVSALGSTLIPLMKEKGYDADYAVNVTSTSAILGILIPPSHNMIIYAA
AAGVSVSVADLFLAGVLPGILTGIFLAAAAWIIAVRRGYPKGEFPGWPAFAAAFASALPGLLTAVIIFGGVLGGVFTPTE
SSAVAVIYTLVIAVIVYRTLGFRGFTTAAQNAVKTTAMVMLIIGSAAAFGWLLALLEAPEQLATLLQTLTDNPILILLLI
NLILLILGTFMDMAPLIVITSPIFLPVAMATGMDPVQFGIMMMLNLGIGLVTPPVGSVLFVGCAVGKIKVEQAVRTIWPF
YLALFAALMAITFVPALTLTLPGLAG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=418, Percent_Identity=36.8421052631579, Blast_Score=236, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44045; Mature: 44045

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTLLLGLLALLLIIGVPVAFALGLASLVTFIFMDIAPVVAFQRIATGVNVFSLMAIPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIFAGDLMQQAGIAERLVRVADAAMGRIRGGLGVVDVGASMMFGGVSGSAVASVSALGST
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCHHHHCCCCCCHHHHHHHHHHHH
LIPLMKEKGYDADYAVNVTSTSAILGILIPPSHNMIIYAAAAGVSVSVADLFLAGVLPGI
HHHHHHHCCCCCCEEEEEECHHEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
LTGIFLAAAAWIIAVRRGYPKGEFPGWPAFAAAFASALPGLLTAVIIFGGVLGGVFTPTE
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SSAVAVIYTLVIAVIVYRTLGFRGFTTAAQNAVKTTAMVMLIIGSAAAFGWLLALLEAPE
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
QLATLLQTLTDNPILILLLINLILLILGTFMDMAPLIVITSPIFLPVAMATGMDPVQFGI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MMMLNLGIGLVTPPVGSVLFVGCAVGKIKVEQAVRTIWPFYLALFAALMAITFVPALTLT
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPGLAG
CCCCCC
>Mature Secondary Structure
MELTLLLGLLALLLIIGVPVAFALGLASLVTFIFMDIAPVVAFQRIATGVNVFSLMAIPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIFAGDLMQQAGIAERLVRVADAAMGRIRGGLGVVDVGASMMFGGVSGSAVASVSALGST
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCHHHHCCCCCCHHHHHHHHHHHH
LIPLMKEKGYDADYAVNVTSTSAILGILIPPSHNMIIYAAAAGVSVSVADLFLAGVLPGI
HHHHHHHCCCCCCEEEEEECHHEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
LTGIFLAAAAWIIAVRRGYPKGEFPGWPAFAAAFASALPGLLTAVIIFGGVLGGVFTPTE
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SSAVAVIYTLVIAVIVYRTLGFRGFTTAAQNAVKTTAMVMLIIGSAAAFGWLLALLEAPE
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
QLATLLQTLTDNPILILLLINLILLILGTFMDMAPLIVITSPIFLPVAMATGMDPVQFGI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MMMLNLGIGLVTPPVGSVLFVGCAVGKIKVEQAVRTIWPFYLALFAALMAITFVPALTLT
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPGLAG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]