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The map label for this gene is asdII [H]

Identifier: 16125671

GI number: 16125671

Start: 1570752

End: 1572302

Strand: Direct

Name: asdII [H]

Synonym: CC_1422

Alternate gene names: 16125671

Gene position: 1570752-1572302 (Clockwise)

Preceding gene: 16125670

Following gene: 16125672

Centisome position: 39.1

GC content: 63.57

Gene sequence:

>1551_bases
ATGGGCGGCAAGTGGTTGGGCGCGGCGATCGCGCTACTGGCCGTGGCGACGAGCGCGCGGGCGGGCGAAATCAGCGCGAC
GGCGACGCTGCGGGCCGATCAATCGGGTCCGGCGATCTCGCGCTACATCTACGGCCAGTTCTCCGAACATCTGGGCGCGG
GCGTCTATGACGGCATCTGGGTCGGGCCGGATTCGAAGATTCCCAATGTCCGAGGCGTCCGCAGCGACGTCGTCGGCGCG
CTGAAGGCGATCAAGACTCCGGTGATCCGCTGGCCGGGCGGCTGCTTCGCCGATGAGTACCACTGGCGCGACGGCATTGG
CCCGCGCGACAAGCGTCCGTCGCGCAAGAACAACTGGTGGGGCGGCTCGCCTGAGACCAACGCCTTCGGCACCCACGAGT
TCATGGATTTCGCCGAGCAGGTCGGCGCCGACCCCTATGTCGCCGTCAATGTCGGCTCGTCCAATCCGACCGTGATGCGC
GAGTGGATCGAGTACATGACCTCGCCGGGCGAAGACACCTTGGCCCAGGAGCGCCGCGCCAACGGTCGCGACAAGCCCTG
GAAGGTGCCGTTCATCGGCATCGGCAACGAGAGCTGGGGCTGTGGCGGGGAGATGACGCCAGAGTACTACGCCAATGAGT
ACCGTCGCTTCTCGTCATTCTTCCACAAGAACAGCGACAATCCGGCGGTGCGCGTGGCGTCGGGCGCCAATTCATTCGAC
GTGAACTGGACCGACGTGGTGACCAAGGCGGCGGCCAAGCGGATGGACGCCATTTCGCTGCACTACTACACGATCCAAAC
CGGCGACTGGAACAAGAAGGGCGCGGCCACCGGCTTCGACAAGGCCGCCTGGGGCAAGTCCTTCGCTCAGACGTTGCGGA
TGGATGATCTGCTTCGCCAGCACATCGCGGTGCTGGACCGCAATGATCCTCAGAAGCGCATCGGTCTCTATGTCGACGAG
TGGGGGACTTGGTACGACACCGAACCGGGGACCAATCCCGGCCATCTTTATCAGCTGAACACTTTGCGCGACGGCGTTCT
GGCGGCGGTGAACTTCAATATCTTCCATAAGCACGCGGAGCGCGTGCGGATGGCCAACATCGCCCAGACCATCAACGTGC
TGCAGGCGGTGATCCTGACCAAGGGCGACCAGATGGTGCTGACGCCGACCTACTATGCGCACCAGATGTACATGCCGTTC
CAGGACTCGACCGCCATTCCGCTTGAGATCACGGCGCCCGAGATCGATGTCGCGGGCAGCAAGATCCCGGCCTTCAACGC
CTCGGCGGCCAAGGGCAAAGACGGCAAAATCTATGTCGCAGTCGCGAACATGGCTCTCGACGACAGCGTGAAGTTGAACG
TCTCGCTGGCGGGCCTGAAGGCCAAGATGGTGAGCGGCCAGGTTCTGACGGCCGACAAGATGGACGCGATGAACGACTTC
GGCGCCAAGCCCGCCGTGGTTCCGGTCCCGTTCAAAGGCGGCAAGCTCTCCGGGGACCGGCTGACCCTCGACATTCCCTC
GAAATCCGTCGTGGTTGTGAGGTTGGACTAA

Upstream 100 bases:

>100_bases
TCCTGTTGTCGGCGAACGGCGATCTGGAAACTATATTGTCGGACAAATAGGCGCCTGCTATGGCTTCCTCAACGACGTAT
CGTTGATTGGGGAGAGGATC

Downstream 100 bases:

>100_bases
CCGAGGGGCGAAGGGGCGACGTCCTAGTCCCGGATGGCGTATCGGCTGCGTTCCGGCTAAGACGCGCGTCATGCTGCGTA
TTTCGGAACTGAAGCTGCCG

Product: alpha-L-arabinofuranosidase

Products: NA

Alternate protein names: Arabinosidase 2 [H]

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MGGKWLGAAIALLAVATSARAGEISATATLRADQSGPAISRYIYGQFSEHLGAGVYDGIWVGPDSKIPNVRGVRSDVVGA
LKAIKTPVIRWPGGCFADEYHWRDGIGPRDKRPSRKNNWWGGSPETNAFGTHEFMDFAEQVGADPYVAVNVGSSNPTVMR
EWIEYMTSPGEDTLAQERRANGRDKPWKVPFIGIGNESWGCGGEMTPEYYANEYRRFSSFFHKNSDNPAVRVASGANSFD
VNWTDVVTKAAAKRMDAISLHYYTIQTGDWNKKGAATGFDKAAWGKSFAQTLRMDDLLRQHIAVLDRNDPQKRIGLYVDE
WGTWYDTEPGTNPGHLYQLNTLRDGVLAAVNFNIFHKHAERVRMANIAQTINVLQAVILTKGDQMVLTPTYYAHQMYMPF
QDSTAIPLEITAPEIDVAGSKIPAFNASAAKGKDGKIYVAVANMALDDSVKLNVSLAGLKAKMVSGQVLTADKMDAMNDF
GAKPAVVPVPFKGGKLSGDRLTLDIPSKSVVVVRLD

Sequences:

>Translated_516_residues
MGGKWLGAAIALLAVATSARAGEISATATLRADQSGPAISRYIYGQFSEHLGAGVYDGIWVGPDSKIPNVRGVRSDVVGA
LKAIKTPVIRWPGGCFADEYHWRDGIGPRDKRPSRKNNWWGGSPETNAFGTHEFMDFAEQVGADPYVAVNVGSSNPTVMR
EWIEYMTSPGEDTLAQERRANGRDKPWKVPFIGIGNESWGCGGEMTPEYYANEYRRFSSFFHKNSDNPAVRVASGANSFD
VNWTDVVTKAAAKRMDAISLHYYTIQTGDWNKKGAATGFDKAAWGKSFAQTLRMDDLLRQHIAVLDRNDPQKRIGLYVDE
WGTWYDTEPGTNPGHLYQLNTLRDGVLAAVNFNIFHKHAERVRMANIAQTINVLQAVILTKGDQMVLTPTYYAHQMYMPF
QDSTAIPLEITAPEIDVAGSKIPAFNASAAKGKDGKIYVAVANMALDDSVKLNVSLAGLKAKMVSGQVLTADKMDAMNDF
GAKPAVVPVPFKGGKLSGDRLTLDIPSKSVVVVRLD
>Mature_515_residues
GGKWLGAAIALLAVATSARAGEISATATLRADQSGPAISRYIYGQFSEHLGAGVYDGIWVGPDSKIPNVRGVRSDVVGAL
KAIKTPVIRWPGGCFADEYHWRDGIGPRDKRPSRKNNWWGGSPETNAFGTHEFMDFAEQVGADPYVAVNVGSSNPTVMRE
WIEYMTSPGEDTLAQERRANGRDKPWKVPFIGIGNESWGCGGEMTPEYYANEYRRFSSFFHKNSDNPAVRVASGANSFDV
NWTDVVTKAAAKRMDAISLHYYTIQTGDWNKKGAATGFDKAAWGKSFAQTLRMDDLLRQHIAVLDRNDPQKRIGLYVDEW
GTWYDTEPGTNPGHLYQLNTLRDGVLAAVNFNIFHKHAERVRMANIAQTINVLQAVILTKGDQMVLTPTYYAHQMYMPFQ
DSTAIPLEITAPEIDVAGSKIPAFNASAAKGKDGKIYVAVANMALDDSVKLNVSLAGLKAKMVSGQVLTADKMDAMNDFG
AKPAVVPVPFKGGKLSGDRLTLDIPSKSVVVVRLD

Specific function: Unknown

COG id: COG3534

COG function: function code G; Alpha-L-arabinofuranosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010720
- InterPro:   IPR013780
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF06964 Alpha-L-AF_C [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 56431; Mature: 56300

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGKWLGAAIALLAVATSARAGEISATATLRADQSGPAISRYIYGQFSEHLGAGVYDGIW
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEE
VGPDSKIPNVRGVRSDVVGALKAIKTPVIRWPGGCFADEYHWRDGIGPRDKRPSRKNNWW
ECCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGSPETNAFGTHEFMDFAEQVGADPYVAVNVGSSNPTVMREWIEYMTSPGEDTLAQERRA
CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHC
NGRDKPWKVPFIGIGNESWGCGGEMTPEYYANEYRRFSSFFHKNSDNPAVRVASGANSFD
CCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
VNWTDVVTKAAAKRMDAISLHYYTIQTGDWNKKGAATGFDKAAWGKSFAQTLRMDDLLRQ
CCHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HIAVLDRNDPQKRIGLYVDEWGTWYDTEPGTNPGHLYQLNTLRDGVLAAVNFNIFHKHAE
HHHHHCCCCCHHHHCEEEECCCCEECCCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHH
RVRMANIAQTINVLQAVILTKGDQMVLTPTYYAHQMYMPFQDSTAIPLEITAPEIDVAGS
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCEEEEEEECCCEECCCC
KIPAFNASAAKGKDGKIYVAVANMALDDSVKLNVSLAGLKAKMVSGQVLTADKMDAMNDF
CCCCCCCCCCCCCCCEEEEEEECEEECCCEEEEEEEECEEEEEECCEEEEHHHHHHHHHC
GAKPAVVPVPFKGGKLSGDRLTLDIPSKSVVVVRLD
CCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEC
>Mature Secondary Structure 
GGKWLGAAIALLAVATSARAGEISATATLRADQSGPAISRYIYGQFSEHLGAGVYDGIW
CCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEE
VGPDSKIPNVRGVRSDVVGALKAIKTPVIRWPGGCFADEYHWRDGIGPRDKRPSRKNNWW
ECCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGSPETNAFGTHEFMDFAEQVGADPYVAVNVGSSNPTVMREWIEYMTSPGEDTLAQERRA
CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHC
NGRDKPWKVPFIGIGNESWGCGGEMTPEYYANEYRRFSSFFHKNSDNPAVRVASGANSFD
CCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
VNWTDVVTKAAAKRMDAISLHYYTIQTGDWNKKGAATGFDKAAWGKSFAQTLRMDDLLRQ
CCHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HIAVLDRNDPQKRIGLYVDEWGTWYDTEPGTNPGHLYQLNTLRDGVLAAVNFNIFHKHAE
HHHHHCCCCCHHHHCEEEECCCCEECCCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHH
RVRMANIAQTINVLQAVILTKGDQMVLTPTYYAHQMYMPFQDSTAIPLEITAPEIDVAGS
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCEEEEEEECCCEECCCC
KIPAFNASAAKGKDGKIYVAVANMALDDSVKLNVSLAGLKAKMVSGQVLTADKMDAMNDF
CCCCCCCCCCCCCCCEEEEEEECEEECCCEEEEEEEECEEEEEECCEEEEHHHHHHHHHC
GAKPAVVPVPFKGGKLSGDRLTLDIPSKSVVVVRLD
CCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA