| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is 16125655
Identifier: 16125655
GI number: 16125655
Start: 1553657
End: 1554157
Strand: Direct
Name: 16125655
Synonym: CC_1406
Alternate gene names: NA
Gene position: 1553657-1554157 (Clockwise)
Preceding gene: 16125654
Following gene: 16125656
Centisome position: 38.68
GC content: 69.66
Gene sequence:
>501_bases ATGACGATCGCCGCGCAATCCGTCACGACCGCGACCTCACGCAAGGGCCAGATCACCGGCTGGCATGTGCTGATCGGCGT GGTCACCTTCTTCGCCCTGATCATCGCGGTGGACGTGGTGTTCATGGTGCTGGCCTACCGGACCTTCTCCGGCCAGGTCG CTTCCAACCCCTATGAAGCGGGTCTGGCGTTCAACAAGACCTTGGCCCAGCGGGAGCGCGAGGCGGCCCTCGGTTGGGCG GCGGCGGTGGAGACCGTGGACGGCGACGCGGTGATCGTCCGAGTGCGCGATCGGGCGGGGCGGCCGCTGGACCGCCTCTC GCTGACGGGATCACTCGCGCGTCCGGCGACCGAGGTCGGCAAGCAGACCCTCAACTTCAAGCCGCTCGGCGACGGCCGCT ATCGGGCCACGGCCCGTCTGGGCGGCGCCTGGGATCTGCGCGCGACGGCGCGCGACGCCCAGAACGCGTTCGAGCTGGAA GCCCGCCTGGTGTCGCAATGA
Upstream 100 bases:
>100_bases CCGATCTCGCCAGCAGCGTACCGGCCCGGTTCATCGCCAAGTCCGGCGACATCATCACCCAGTCCAAGACCGTCTTCCTC TCTGGAGCTGCGAACCCGCA
Downstream 100 bases:
>100_bases GCCACAGCCTCGCCCTGCATCGTGACCTGGAGGCCTTCGTTCGGCGCGACGACGCCGGGCGAGGGCGCTTCGAACTGCTC GTGCGCGGCGCGCGCTGCGC
Product: ferredoxin
Products: NA
Alternate protein names: Nitrogen Fixation Protein FixH; FixH Protein; Cation Pump-Linked Membrane Protein FixH; Ferredoxin; Integral Membrane Protein Linked A Cation Pump
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTIAAQSVTTATSRKGQITGWHVLIGVVTFFALIIAVDVVFMVLAYRTFSGQVASNPYEAGLAFNKTLAQREREAALGWA AAVETVDGDAVIVRVRDRAGRPLDRLSLTGSLARPATEVGKQTLNFKPLGDGRYRATARLGGAWDLRATARDAQNAFELE ARLVSQ
Sequences:
>Translated_166_residues MTIAAQSVTTATSRKGQITGWHVLIGVVTFFALIIAVDVVFMVLAYRTFSGQVASNPYEAGLAFNKTLAQREREAALGWA AAVETVDGDAVIVRVRDRAGRPLDRLSLTGSLARPATEVGKQTLNFKPLGDGRYRATARLGGAWDLRATARDAQNAFELE ARLVSQ >Mature_165_residues TIAAQSVTTATSRKGQITGWHVLIGVVTFFALIIAVDVVFMVLAYRTFSGQVASNPYEAGLAFNKTLAQREREAALGWAA AVETVDGDAVIVRVRDRAGRPLDRLSLTGSLARPATEVGKQTLNFKPLGDGRYRATARLGGAWDLRATARDAQNAFELEA RLVSQ
Specific function: Unknown
COG id: COG5456
COG function: function code P; Predicted integral membrane protein linked to a cation pump
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17893; Mature: 17761
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAAQSVTTATSRKGQITGWHVLIGVVTFFALIIAVDVVFMVLAYRTFSGQVASNPYEA CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH GLAFNKTLAQREREAALGWAAAVETVDGDAVIVRVRDRAGRPLDRLSLTGSLARPATEVG CHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCHHHHHCCCCCCCCHHHHH KQTLNFKPLGDGRYRATARLGGAWDLRATARDAQNAFELEARLVSQ HHHCCCEECCCCCEEEEEECCCCEECHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIAAQSVTTATSRKGQITGWHVLIGVVTFFALIIAVDVVFMVLAYRTFSGQVASNPYEA CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH GLAFNKTLAQREREAALGWAAAVETVDGDAVIVRVRDRAGRPLDRLSLTGSLARPATEVG CHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCHHHHHCCCCCCCCHHHHH KQTLNFKPLGDGRYRATARLGGAWDLRATARDAQNAFELEARLVSQ HHHCCCEECCCCCEEEEEECCCCEECHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA