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The map label for this gene is ydiS [C]

Identifier: 16125583

GI number: 16125583

Start: 1487461

End: 1489137

Strand: Direct

Name: ydiS [C]

Synonym: CC_1334

Alternate gene names: 16125583

Gene position: 1487461-1489137 (Clockwise)

Preceding gene: 16125580

Following gene: 16125584

Centisome position: 37.03

GC content: 64.94

Gene sequence:

>1677_bases
ATGAGCGAAGACCTCGAACGCGAGTCGATGGAGTACGACGTCGTCATCGTCGGCGGCGGTCCCGCAGGCCTCTCGGCGGC
GATCCGTCTCAAGCAGATGGCCGCCAAGGCCGGAACCGAGATTTCGGTGGCCTTGCTCGAAAAGGGCTCGGAAGTCGGCG
CGCATATCCTGTCGGGCGCCGTGATCGACCCCAAGGGCCTGGCCGAACTCTTCCCCAACTGGAAGGAAGAGGGCGCGCCG
CTGGAGACGCCGGTCACCAAGGACCGCTTCAAGCTGCTGGGCCCGCAAGGCGAGCTGAGCCTGCCGATGTTCGCCATGCC
GCCGTTCATGCACAACCACGGCTGCTACATCGCGTCGCTGGCCAATCTGACGCGCTGGCTGGCGGGCAAGGCCGAGGAGC
TGGGCGTCGAAATCTATCCGGGCTTCGCCGCCTCGGACCTCGTCTGGAACGACGACGGCTCGGTCAAGGGCGTGGTGGTC
GGCGTCGTCGGCATCGCCAAGGATGGCGAGAAGAAGCCGGACTACCAGCCGGGTATGGAGCTGCACGGCAAGTATGTCTT
CATCGCCGAGGGCGTGCGCGGCTCGCTGGCCAAGCAACTGATCGCCAAGTTCAAGCTGGATGAAGGCAAGTCGCCGCAGA
AGTACGGCATCGGCATCAAGGAGCTGTGGCAAGTTCCGCCCGAGCAGCACCAGCCGGGCCTGGCCGAGCACACCACCGGC
TGGCCGCTGGATGACCAGACCGGCGGCGGCAGCTTCATGTACCACTTCGGGGACAACTACGTGGCCATCGGCTACGTCGT
GCACCTGAACTACAAGAACCCCTGGCTGTCGCCGTTCGACGAGTTCCAGCGCTTCAAGCAGCATCCGACGGTCCGCCCGC
ATCTGGAAGGTGGCAAGCGCATCGCCTATGGCGCGCGGGCTATCACCGAGGGCGGCTATCAGTCGGTGCCGAAGCTGACC
TTCCCGGGCGGCGCTCTGATCGGCTGCTCGGCGGGCTTTGTGAACGTGCCGCGCATCAAGGGCAGCCACAACGCCGTGAA
AACCGGAATTCTGGCCGCCGACGCTGCTTTCGAGGCGGTGCAGGCCGGCCGCGCCGGCGACGAGCTGACCGCCTACCAGA
CGTCCTACGACAAGTCGTGGGTGGCCAAGGAGCTGAAGATCGTCCGCAACGCCAAGCCGTTGCTGGGCAAGTTCGGCACG
GCGCTTGGCGGCGCGCTCGGCATGGCCGACATGTGGGTCAATCACCTCACGGGCGGCGCTTTGGGTCTGTTCGGCACGCT
CAAGCATGACAAGACCGACGCGGCGTCGACCGGTCTCGCCAAGGACTACAAGCCCATCGTCTATCCCAAGCCCGACGGCG
TGATCAGCTTCGACAAGCTGAGCTCGGTGTTCCTGTCGGCCACCAACCACGAGGAAGACCAGCCGGCCCACCTGCGCCTG
AAGGATCCTTCGGTGCCGATCCAGGTGAACCTGCCCAAGTACGGCGAGCCGGCGCGTCTCTACTGCCCGGCCGGCGTCTA
TGAAGTGCTCTACAATGAGCAGGGCGGTGATCCGCGCTTCCAGATCAATGCGCAGAACTGCGTCCACTGCAAAACCTGCG
ACATCAAGGACCCGTCGCAGAATATCGTCTGGACCACGCCGGAAGGCGGTGGTGGCCCGAACTATCCGAACATGTGA

Upstream 100 bases:

>100_bases
AAAAATCCGGCTAGGTGCTTGACCACCCCCGCGTCACGTTCGGATAAGCTGTGATTCAAACAGTCATAAGAGCGGCCGTA
GGGCCTCACCGGGAGATCCC

Downstream 100 bases:

>100_bases
CGAAGCAGCCTCCCGCCCCTCAGGTCGGGAGGCTTTTTCTTGCGGACCGCCTCGAAACCTCCGAGGGTGGCGGCATGACG
CGTCTCAAAGTTCTGCTCGC

Product: electrotransfer ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MSEDLERESMEYDVVIVGGGPAGLSAAIRLKQMAAKAGTEISVALLEKGSEVGAHILSGAVIDPKGLAELFPNWKEEGAP
LETPVTKDRFKLLGPQGELSLPMFAMPPFMHNHGCYIASLANLTRWLAGKAEELGVEIYPGFAASDLVWNDDGSVKGVVV
GVVGIAKDGEKKPDYQPGMELHGKYVFIAEGVRGSLAKQLIAKFKLDEGKSPQKYGIGIKELWQVPPEQHQPGLAEHTTG
WPLDDQTGGGSFMYHFGDNYVAIGYVVHLNYKNPWLSPFDEFQRFKQHPTVRPHLEGGKRIAYGARAITEGGYQSVPKLT
FPGGALIGCSAGFVNVPRIKGSHNAVKTGILAADAAFEAVQAGRAGDELTAYQTSYDKSWVAKELKIVRNAKPLLGKFGT
ALGGALGMADMWVNHLTGGALGLFGTLKHDKTDAASTGLAKDYKPIVYPKPDGVISFDKLSSVFLSATNHEEDQPAHLRL
KDPSVPIQVNLPKYGEPARLYCPAGVYEVLYNEQGGDPRFQINAQNCVHCKTCDIKDPSQNIVWTTPEGGGGPNYPNM

Sequences:

>Translated_558_residues
MSEDLERESMEYDVVIVGGGPAGLSAAIRLKQMAAKAGTEISVALLEKGSEVGAHILSGAVIDPKGLAELFPNWKEEGAP
LETPVTKDRFKLLGPQGELSLPMFAMPPFMHNHGCYIASLANLTRWLAGKAEELGVEIYPGFAASDLVWNDDGSVKGVVV
GVVGIAKDGEKKPDYQPGMELHGKYVFIAEGVRGSLAKQLIAKFKLDEGKSPQKYGIGIKELWQVPPEQHQPGLAEHTTG
WPLDDQTGGGSFMYHFGDNYVAIGYVVHLNYKNPWLSPFDEFQRFKQHPTVRPHLEGGKRIAYGARAITEGGYQSVPKLT
FPGGALIGCSAGFVNVPRIKGSHNAVKTGILAADAAFEAVQAGRAGDELTAYQTSYDKSWVAKELKIVRNAKPLLGKFGT
ALGGALGMADMWVNHLTGGALGLFGTLKHDKTDAASTGLAKDYKPIVYPKPDGVISFDKLSSVFLSATNHEEDQPAHLRL
KDPSVPIQVNLPKYGEPARLYCPAGVYEVLYNEQGGDPRFQINAQNCVHCKTCDIKDPSQNIVWTTPEGGGGPNYPNM
>Mature_557_residues
SEDLERESMEYDVVIVGGGPAGLSAAIRLKQMAAKAGTEISVALLEKGSEVGAHILSGAVIDPKGLAELFPNWKEEGAPL
ETPVTKDRFKLLGPQGELSLPMFAMPPFMHNHGCYIASLANLTRWLAGKAEELGVEIYPGFAASDLVWNDDGSVKGVVVG
VVGIAKDGEKKPDYQPGMELHGKYVFIAEGVRGSLAKQLIAKFKLDEGKSPQKYGIGIKELWQVPPEQHQPGLAEHTTGW
PLDDQTGGGSFMYHFGDNYVAIGYVVHLNYKNPWLSPFDEFQRFKQHPTVRPHLEGGKRIAYGARAITEGGYQSVPKLTF
PGGALIGCSAGFVNVPRIKGSHNAVKTGILAADAAFEAVQAGRAGDELTAYQTSYDKSWVAKELKIVRNAKPLLGKFGTA
LGGALGMADMWVNHLTGGALGLFGTLKHDKTDAASTGLAKDYKPIVYPKPDGVISFDKLSSVFLSATNHEEDQPAHLRLK
DPSVPIQVNLPKYGEPARLYCPAGVYEVLYNEQGGDPRFQINAQNCVHCKTCDIKDPSQNIVWTTPEGGGGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=566, Percent_Identity=55.1236749116608, Blast_Score=605, Evalue=1e-173,
Organism=Escherichia coli, GI1787991, Length=413, Percent_Identity=27.1186440677966, Blast_Score=119, Evalue=6e-28,
Organism=Escherichia coli, GI1786227, Length=342, Percent_Identity=27.1929824561404, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87082155, Length=381, Percent_Identity=27.5590551181102, Blast_Score=95, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI25144720, Length=563, Percent_Identity=51.6873889875666, Blast_Score=564, Evalue=1e-161,
Organism=Saccharomyces cerevisiae, GI6324932, Length=576, Percent_Identity=46.3541666666667, Blast_Score=477, Evalue=1e-135,
Organism=Drosophila melanogaster, GI24652256, Length=565, Percent_Identity=58.0530973451327, Blast_Score=630, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60168; Mature: 60037

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDLERESMEYDVVIVGGGPAGLSAAIRLKQMAAKAGTEISVALLEKGSEVGAHILSGA
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCC
VIDPKGLAELFPNWKEEGAPLETPVTKDRFKLLGPQGELSLPMFAMPPFMHNHGCYIASL
EECCHHHHHHCCCHHHCCCCCCCCCCCCHHHEECCCCCCCCCCEECCCCCCCCCCHHHHH
ANLTRWLAGKAEELGVEIYPGFAASDLVWNDDGSVKGVVVGVVGIAKDGEKKPDYQPGME
HHHHHHHCCCHHHCCEEEECCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCHH
LHGKYVFIAEGVRGSLAKQLIAKFKLDEGKSPQKYGIGIKELWQVPPEQHQPGLAEHTTG
HCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCHHCCCCCCCCCCC
WPLDDQTGGGSFMYHFGDNYVAIGYVVHLNYKNPWLSPFDEFQRFKQHPTVRPHLEGGKR
CCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCE
IAYGARAITEGGYQSVPKLTFPGGALIGCSAGFVNVPRIKGSHNAVKTGILAADAAFEAV
EEECCHHHCCCCCCCCCEEECCCCCEEECCCCCEECCCCCCCCCHHHHCEEEHHHHHHHH
QAGRAGDELTAYQTSYDKSWVAKELKIVRNAKPLLGKFGTALGGALGMADMWVNHLTGGA
HCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LGLFGTLKHDKTDAASTGLAKDYKPIVYPKPDGVISFDKLSSVFLSATNHEEDQPAHLRL
HHHEEECCCCCCCHHHCCCCCCCCCEEECCCCCEEEHHHHHHHHEECCCCCCCCCCEEEE
KDPSVPIQVNLPKYGEPARLYCPAGVYEVLYNEQGGDPRFQINAQNCVHCKTCDIKDPSQ
ECCCCEEEEECCCCCCCCEEECCCHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCC
NIVWTTPEGGGGPNYPNM
CEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SEDLERESMEYDVVIVGGGPAGLSAAIRLKQMAAKAGTEISVALLEKGSEVGAHILSGA
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCC
VIDPKGLAELFPNWKEEGAPLETPVTKDRFKLLGPQGELSLPMFAMPPFMHNHGCYIASL
EECCHHHHHHCCCHHHCCCCCCCCCCCCHHHEECCCCCCCCCCEECCCCCCCCCCHHHHH
ANLTRWLAGKAEELGVEIYPGFAASDLVWNDDGSVKGVVVGVVGIAKDGEKKPDYQPGME
HHHHHHHCCCHHHCCEEEECCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCHH
LHGKYVFIAEGVRGSLAKQLIAKFKLDEGKSPQKYGIGIKELWQVPPEQHQPGLAEHTTG
HCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCHHCCCCCCCCCCC
WPLDDQTGGGSFMYHFGDNYVAIGYVVHLNYKNPWLSPFDEFQRFKQHPTVRPHLEGGKR
CCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCE
IAYGARAITEGGYQSVPKLTFPGGALIGCSAGFVNVPRIKGSHNAVKTGILAADAAFEAV
EEECCHHHCCCCCCCCCEEECCCCCEEECCCCCEECCCCCCCCCHHHHCEEEHHHHHHHH
QAGRAGDELTAYQTSYDKSWVAKELKIVRNAKPLLGKFGTALGGALGMADMWVNHLTGGA
HCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LGLFGTLKHDKTDAASTGLAKDYKPIVYPKPDGVISFDKLSSVFLSATNHEEDQPAHLRL
HHHEEECCCCCCCHHHCCCCCCCCCEEECCCCCEEEHHHHHHHHEECCCCCCCCCCEEEE
KDPSVPIQVNLPKYGEPARLYCPAGVYEVLYNEQGGDPRFQINAQNCVHCKTCDIKDPSQ
ECCCCEEEEECCCCCCCCEEECCCHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCC
NIVWTTPEGGGGPNYPNM
CEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]