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The map label for this gene is rutA [H]

Identifier: 16125421

GI number: 16125421

Start: 1328005

End: 1329072

Strand: Direct

Name: rutA [H]

Synonym: CC_1169

Alternate gene names: 16125421

Gene position: 1328005-1329072 (Clockwise)

Preceding gene: 16125412

Following gene: 16125422

Centisome position: 33.06

GC content: 66.95

Gene sequence:

>1068_bases
GTGATGTTCTCCAGACCTTCGCCGCACAAGGACTTTGGTGTCTTCCTGCCCGTGGCCAACGGCGGCTGGATCGTGTCCGC
CACCACGCCCACGCTTGACGGCCTCTACGCCCAGAACCGGGCGGCGGCCGTGCTGGCGGACGAGATCGGCCTGGATTTCG
TCATGTCGATGGGCAAGTTCCGCGGCTTTGGTGGTGAGACCGATCATTGGGGCACGTCGCTGGAGTCGGTGACCTTGATG
GCGGCCATCGCCGAGGCGACCAAGCGCGTGCGCATCTGGGCGACGGTGCATCCGCTGCTGCAGAACCCCGCCGTGGCGGC
CAAGATGATCGCGACTCTGGATCAGATCAGCGGCGGCCGGGCGGGCCTCAACATCGTGGCCGGCGCCTACAAGGCCGAGT
TCGACCAGATGAGCGCCTGGGACGATTCGTTGTCGCACGACGACCGCTACGCCCTTGCCGAGGAATGGACGACGATCGTC
AAGCGGCTCTGGACCGAAGACAGCGTCGACTTCTCCGGCCGCTATTTCACGATGAAGGACTGCCAGTCCAAGCCCAAGCC
TCTGGCCAGGCCTCGCCCGGAACTGATCTGCGCGGGGATGTCGGATCGCGGCTTCCAGTTCTCGGTGCGTGAGGCCGACG
CCTGCTTCATCGGCGGACGCTCGCGCGAGGAGCACCGCGAGGCCTCCCGCCGGGCCAAGCGCATGGCCGCAGACCTGGGA
CGGTCGGTCCGCACCTATGCGATGTGCACGGTGATCCATGGATCCACCGACGCCGCCGCTCAGGCCCTGGTGGCGCGCTA
CGCCGAGGGCGCCGATATCGGAGCCATTCTCGCCATGCTGGCCAGTTGGGGCGTCCCCGCAGACCGGCTGCAGGCGACGG
CCAGGCAGCAGGGCGCGTTCATGACCCAGACCGTGGTCGGCTCGCCCGCCTCTTGCCGCGAGCAGATCGAGGCGTTTGTC
ACGGCGTGCGAACTGGACGGCCTGATGCTGATCTTTCCGGACTATGTCGAAGGGCTTTCCATGTTCGGAGCGGAGATCCT
GCCGGGCCTGCGGGCGGTGTTCTCGTGA

Upstream 100 bases:

>100_bases
CCCGTGGCCACGATGGGCGGACGGTCGGGCCGGTTTCGAGCGTGGTTGTCCATGAGAGCGAAGCGCGTGATCCTTACCGG
CGGGCCGTGTAAGGATCCGC

Downstream 100 bases:

>100_bases
GCTTGCCGGCCTGGATCGCGCCGCAGCGCACGGCGTTGATGATTGTGGACATGCAGGTCGATTTCGCCGCGCCCGAGGGG
CTGTCCGCCCAGTGGGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MMFSRPSPHKDFGVFLPVANGGWIVSATTPTLDGLYAQNRAAAVLADEIGLDFVMSMGKFRGFGGETDHWGTSLESVTLM
AAIAEATKRVRIWATVHPLLQNPAVAAKMIATLDQISGGRAGLNIVAGAYKAEFDQMSAWDDSLSHDDRYALAEEWTTIV
KRLWTEDSVDFSGRYFTMKDCQSKPKPLARPRPELICAGMSDRGFQFSVREADACFIGGRSREEHREASRRAKRMAADLG
RSVRTYAMCTVIHGSTDAAAQALVARYAEGADIGAILAMLASWGVPADRLQATARQQGAFMTQTVVGSPASCREQIEAFV
TACELDGLMLIFPDYVEGLSMFGAEILPGLRAVFS

Sequences:

>Translated_355_residues
MMFSRPSPHKDFGVFLPVANGGWIVSATTPTLDGLYAQNRAAAVLADEIGLDFVMSMGKFRGFGGETDHWGTSLESVTLM
AAIAEATKRVRIWATVHPLLQNPAVAAKMIATLDQISGGRAGLNIVAGAYKAEFDQMSAWDDSLSHDDRYALAEEWTTIV
KRLWTEDSVDFSGRYFTMKDCQSKPKPLARPRPELICAGMSDRGFQFSVREADACFIGGRSREEHREASRRAKRMAADLG
RSVRTYAMCTVIHGSTDAAAQALVARYAEGADIGAILAMLASWGVPADRLQATARQQGAFMTQTVVGSPASCREQIEAFV
TACELDGLMLIFPDYVEGLSMFGAEILPGLRAVFS
>Mature_355_residues
MMFSRPSPHKDFGVFLPVANGGWIVSATTPTLDGLYAQNRAAAVLADEIGLDFVMSMGKFRGFGGETDHWGTSLESVTLM
AAIAEATKRVRIWATVHPLLQNPAVAAKMIATLDQISGGRAGLNIVAGAYKAEFDQMSAWDDSLSHDDRYALAEEWTTIV
KRLWTEDSVDFSGRYFTMKDCQSKPKPLARPRPELICAGMSDRGFQFSVREADACFIGGRSREEHREASRRAKRMAADLG
RSVRTYAMCTVIHGSTDAAAQALVARYAEGADIGAILAMLASWGVPADRLQATARQQGAFMTQTVVGSPASCREQIEAFV
TACELDGLMLIFPDYVEGLSMFGAEILPGLRAVFS

Specific function: Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product wh

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family. RutA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=348, Percent_Identity=37.0689655172414, Blast_Score=211, Evalue=6e-56,
Organism=Escherichia coli, GI1787166, Length=232, Percent_Identity=27.1551724137931, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR019914
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 38552; Mature: 38552

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFSRPSPHKDFGVFLPVANGGWIVSATTPTLDGLYAQNRAAAVLADEIGLDFVMSMGKF
CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH
RGFGGETDHWGTSLESVTLMAAIAEATKRVRIWATVHPLLQNPAVAAKMIATLDQISGGR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCHHHHHHHHHHHHHCCCC
AGLNIVAGAYKAEFDQMSAWDDSLSHDDRYALAEEWTTIVKRLWTEDSVDFSGRYFTMKD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH
CQSKPKPLARPRPELICAGMSDRGFQFSVREADACFIGGRSREEHREASRRAKRMAADLG
HCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHC
RSVRTYAMCTVIHGSTDAAAQALVARYAEGADIGAILAMLASWGVPADRLQATARQQGAF
CHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCE
MTQTVVGSPASCREQIEAFVTACELDGLMLIFPDYVEGLSMFGAEILPGLRAVFS
EHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMFSRPSPHKDFGVFLPVANGGWIVSATTPTLDGLYAQNRAAAVLADEIGLDFVMSMGKF
CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH
RGFGGETDHWGTSLESVTLMAAIAEATKRVRIWATVHPLLQNPAVAAKMIATLDQISGGR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCHHHHHHHHHHHHHCCCC
AGLNIVAGAYKAEFDQMSAWDDSLSHDDRYALAEEWTTIVKRLWTEDSVDFSGRYFTMKD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH
CQSKPKPLARPRPELICAGMSDRGFQFSVREADACFIGGRSREEHREASRRAKRMAADLG
HCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHC
RSVRTYAMCTVIHGSTDAAAQALVARYAEGADIGAILAMLASWGVPADRLQATARQQGAF
CHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCE
MTQTVVGSPASCREQIEAFVTACELDGLMLIFPDYVEGLSMFGAEILPGLRAVFS
EHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA