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The map label for this gene is ydjN [C]

Identifier: 16125356

GI number: 16125356

Start: 1242459

End: 1243889

Strand: Direct

Name: ydjN [C]

Synonym: CC_1104

Alternate gene names: 16125356

Gene position: 1242459-1243889 (Clockwise)

Preceding gene: 16125355

Following gene: 16125357

Centisome position: 30.93

GC content: 67.02

Gene sequence:

>1431_bases
TTGGGTCGCCCCTGGAAAAACCTCGCTCGTAAATCCCACTCCGCTACACGACATTGCCCGGCGATACGATTGTCGAGGAA
CGTCATGGCCGCCACGCAGACCAAGAGCAGCCGCTTCATCAGCGGGTTCGGGGCCCAGGTCCTGATCGCCATGGTCGCGG
GCCTGGGGCTGGGATTGCTGGCGCGTCAGCTGGGTCCCGCTGAGGGGCAGGCCGGCTACGTCCTGGCCGAAACCCTGCGG
CAGGTGGGGCAGATCTTCGTCCAGTTGCTGCGCGTGCTGGTGCCGCCGCTGGTGTTCACCGCGATCGTCGCCAGCATCGC
CAACATCGCTCAGATGCAGAACGCCGCGCGCCTGGTATGGCGGACGCTGTTCTGGTTTGCGGTCACCGCCCTGATCTCGG
TCGTCATCGGCATCGCGCTGGGCCTCGTCCTCCAGCCCGGCCTGCACGCCAGCCTCGACGCCGCCGCAGCCAAGGCGCCC
AAGACGCATGGATCCTGGCTCGATTTCCTGACGGGCCTCGTGCCGGTGAACATCCTGGGCCTGGCCGCCTCGACCAAGAT
CTCGGACGCCGGCGCGGCCAGCACGTCGCTGTCGTTCAACGTCCTGCAGATCGTCGTCATTTCGCTGGTCACCGGCGTTG
CGGCCCTCAAGGTCGGCGAGGCGGGCGAAGCGTTCCTGAAGTTCAACGCCTCGGCCCTGGCCATTGTGCGCAAGGTGCTG
TGGTGGGTGATCCGCCTGACGCCGATCGGCACGGTGGGCCTGTTCGGCAACGCCGTCGCCCAATACGGCTGGACGACCCT
GGGCCAGCTGGGCGCGTTCACCGTGGCCATCTACGCCGGCCTTGGTCTGGTTCTGCTGGTTGTCTATCCGGTCCTGCTGG
CGCTGAACGACCTGAACCCGATCCGCTTCTTCCAAGGGGCCTGGCCCGCCATCCAGCTCGCCTTTGTCTCGCGCTCGTCC
ATCGGCACGCTGCCGGTGACCGAGACGGTGACCGAGACGCGTCTGGGCGTGCCGCGGGCCTACGCCGCCTTCGCCGTGCC
GCTGGGCGCAACCACCAAGATGGATGGTTGCGCGGCCATCTATCCGGCCATCGCCGCAATCTTCGTCGCCCAGTTCTTCG
GGGTGCATCTGGTCTGGTCGGACTATCTGCTGATCGTCTTCGTGTCGGTCATCGGCTCGGCGGCGACGGCGGGGCTGACC
GGGGCGACGGTGATGCTGACCCTGACTCTGTCGACATTGGGTCTGCCGCTGGAAGGCGCGGGTCTTCTGCTGGCGATCGA
TCCGATTCTCGACATGGGACGCACGGCGGTGAACGTCGCGGGGCAAGCGCTGGTCCCGACCCTGGTCGCCAAGCGCGAGG
GCATTCTTGACCTTGAGGCCTATAACCGGCCGGGTTCGCATGCCGACGCGGCGTTCCACGCGGCCGAATAG

Upstream 100 bases:

>100_bases
CAAGCGCCCCCGGGAGGTTCGTCCTCCCGGGGTTCTTTTTGTGGCGAGGGCAGGGAAGGCCGGGCCTGGGTCGCCTCGTT
TTTGAGCGCTTCAGATTTCC

Downstream 100 bases:

>100_bases
GCGAGCGCGGTTGCACGGTGGAGCTTTAGCGGCGAGTTTGCCCGCCTCGTGAAGCGTCGCCGGGGGATTCCATGGTTTTG
AAGACGAAGACCGGCGGCCC

Product: sodium:dicarboxylate symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MGRPWKNLARKSHSATRHCPAIRLSRNVMAATQTKSSRFISGFGAQVLIAMVAGLGLGLLARQLGPAEGQAGYVLAETLR
QVGQIFVQLLRVLVPPLVFTAIVASIANIAQMQNAARLVWRTLFWFAVTALISVVIGIALGLVLQPGLHASLDAAAAKAP
KTHGSWLDFLTGLVPVNILGLAASTKISDAGAASTSLSFNVLQIVVISLVTGVAALKVGEAGEAFLKFNASALAIVRKVL
WWVIRLTPIGTVGLFGNAVAQYGWTTLGQLGAFTVAIYAGLGLVLLVVYPVLLALNDLNPIRFFQGAWPAIQLAFVSRSS
IGTLPVTETVTETRLGVPRAYAAFAVPLGATTKMDGCAAIYPAIAAIFVAQFFGVHLVWSDYLLIVFVSVIGSAATAGLT
GATVMLTLTLSTLGLPLEGAGLLLAIDPILDMGRTAVNVAGQALVPTLVAKREGILDLEAYNRPGSHADAAFHAAE

Sequences:

>Translated_476_residues
MGRPWKNLARKSHSATRHCPAIRLSRNVMAATQTKSSRFISGFGAQVLIAMVAGLGLGLLARQLGPAEGQAGYVLAETLR
QVGQIFVQLLRVLVPPLVFTAIVASIANIAQMQNAARLVWRTLFWFAVTALISVVIGIALGLVLQPGLHASLDAAAAKAP
KTHGSWLDFLTGLVPVNILGLAASTKISDAGAASTSLSFNVLQIVVISLVTGVAALKVGEAGEAFLKFNASALAIVRKVL
WWVIRLTPIGTVGLFGNAVAQYGWTTLGQLGAFTVAIYAGLGLVLLVVYPVLLALNDLNPIRFFQGAWPAIQLAFVSRSS
IGTLPVTETVTETRLGVPRAYAAFAVPLGATTKMDGCAAIYPAIAAIFVAQFFGVHLVWSDYLLIVFVSVIGSAATAGLT
GATVMLTLTLSTLGLPLEGAGLLLAIDPILDMGRTAVNVAGQALVPTLVAKREGILDLEAYNRPGSHADAAFHAAE
>Mature_475_residues
GRPWKNLARKSHSATRHCPAIRLSRNVMAATQTKSSRFISGFGAQVLIAMVAGLGLGLLARQLGPAEGQAGYVLAETLRQ
VGQIFVQLLRVLVPPLVFTAIVASIANIAQMQNAARLVWRTLFWFAVTALISVVIGIALGLVLQPGLHASLDAAAAKAPK
THGSWLDFLTGLVPVNILGLAASTKISDAGAASTSLSFNVLQIVVISLVTGVAALKVGEAGEAFLKFNASALAIVRKVLW
WVIRLTPIGTVGLFGNAVAQYGWTTLGQLGAFTVAIYAGLGLVLLVVYPVLLALNDLNPIRFFQGAWPAIQLAFVSRSSI
GTLPVTETVTETRLGVPRAYAAFAVPLGATTKMDGCAAIYPAIAAIFVAQFFGVHLVWSDYLLIVFVSVIGSAATAGLTG
ATVMLTLTLSTLGLPLEGAGLLLAIDPILDMGRTAVNVAGQALVPTLVAKREGILDLEAYNRPGSHADAAFHAAE

Specific function: Unknown

COG id: COG1301

COG function: function code C; Na+/H+-dicarboxylate symporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI21314632, Length=400, Percent_Identity=29, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI194239697, Length=452, Percent_Identity=25.8849557522124, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI40254478, Length=410, Percent_Identity=27.5609756097561, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI66773030, Length=376, Percent_Identity=28.4574468085106, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI5032093, Length=338, Percent_Identity=29.8816568047337, Blast_Score=116, Evalue=6e-26,
Organism=Homo sapiens, GI4827012, Length=445, Percent_Identity=26.5168539325843, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI169790839, Length=494, Percent_Identity=26.3157894736842, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI223468564, Length=253, Percent_Identity=30.8300395256917, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI223468566, Length=254, Percent_Identity=30.7086614173228, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI262359914, Length=370, Percent_Identity=26.2162162162162, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI301601644, Length=145, Percent_Identity=35.1724137931034, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI1788024, Length=408, Percent_Identity=31.6176470588235, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790514, Length=436, Percent_Identity=28.8990825688073, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1789947, Length=428, Percent_Identity=26.4018691588785, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1789473, Length=391, Percent_Identity=25.0639386189258, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71996953, Length=467, Percent_Identity=27.1948608137045, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI193206505, Length=407, Percent_Identity=27.2727272727273, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71983099, Length=480, Percent_Identity=25.625, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71983106, Length=417, Percent_Identity=26.378896882494, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17537407, Length=447, Percent_Identity=28.1879194630872, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17541374, Length=393, Percent_Identity=25.4452926208651, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI193206654, Length=437, Percent_Identity=26.0869565217391, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24583025, Length=396, Percent_Identity=27.020202020202, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI17137668, Length=396, Percent_Identity=27.020202020202, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24583023, Length=396, Percent_Identity=27.020202020202, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI281360481, Length=426, Percent_Identity=26.056338028169, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI281360483, Length=426, Percent_Identity=26.056338028169, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI17137666, Length=426, Percent_Identity=26.056338028169, Blast_Score=102, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 49728; Mature: 49597

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRPWKNLARKSHSATRHCPAIRLSRNVMAATQTKSSRFISGFGAQVLIAMVAGLGLGLL
CCCCHHHHHHHCCCHHHCCCHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARQLGPAEGQAGYVLAETLRQVGQIFVQLLRVLVPPLVFTAIVASIANIAQMQNAARLVW
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTLFWFAVTALISVVIGIALGLVLQPGLHASLDAAAAKAPKTHGSWLDFLTGLVPVNILG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LAASTKISDAGAASTSLSFNVLQIVVISLVTGVAALKVGEAGEAFLKFNASALAIVRKVL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHH
WWVIRLTPIGTVGLFGNAVAQYGWTTLGQLGAFTVAIYAGLGLVLLVVYPVLLALNDLNP
HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
IRFFQGAWPAIQLAFVSRSSIGTLPVTETVTETRLGVPRAYAAFAVPLGATTKMDGCAAI
HHHHCCCCHHHEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHEECCCCCCCCCCHHHH
YPAIAAIFVAQFFGVHLVWSDYLLIVFVSVIGSAATAGLTGATVMLTLTLSTLGLPLEGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
GLLLAIDPILDMGRTAVNVAGQALVPTLVAKREGILDLEAYNRPGSHADAAFHAAE
CEEEEEHHHHHCCCHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRPWKNLARKSHSATRHCPAIRLSRNVMAATQTKSSRFISGFGAQVLIAMVAGLGLGLL
CCCHHHHHHHCCCHHHCCCHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARQLGPAEGQAGYVLAETLRQVGQIFVQLLRVLVPPLVFTAIVASIANIAQMQNAARLVW
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTLFWFAVTALISVVIGIALGLVLQPGLHASLDAAAAKAPKTHGSWLDFLTGLVPVNILG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LAASTKISDAGAASTSLSFNVLQIVVISLVTGVAALKVGEAGEAFLKFNASALAIVRKVL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHH
WWVIRLTPIGTVGLFGNAVAQYGWTTLGQLGAFTVAIYAGLGLVLLVVYPVLLALNDLNP
HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
IRFFQGAWPAIQLAFVSRSSIGTLPVTETVTETRLGVPRAYAAFAVPLGATTKMDGCAAI
HHHHCCCCHHHEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHEECCCCCCCCCCHHHH
YPAIAAIFVAQFFGVHLVWSDYLLIVFVSVIGSAATAGLTGATVMLTLTLSTLGLPLEGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
GLLLAIDPILDMGRTAVNVAGQALVPTLVAKREGILDLEAYNRPGSHADAAFHAAE
CEEEEEHHHHHCCCHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]