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The map label for this gene is recA

Identifier: 16125339

GI number: 16125339

Start: 1219186

End: 1220256

Strand: Direct

Name: recA

Synonym: CC_1087

Alternate gene names: 16125339

Gene position: 1219186-1220256 (Clockwise)

Preceding gene: 16125337

Following gene: 16125340

Centisome position: 30.35

GC content: 64.05

Gene sequence:

>1071_bases
ATGACAAGTCAGGCGGCTTTGAAACTCGTGGCCAAGGAAGAAGGCGATAAGCAACGCGCGCTAGAGGCGGCTCTCGCCCA
GATCGACCGCGCGTTCGGCAAGGGCTCGGTGATGAAGCTGGGCGAGAAGGGCAAGGTCGAGATCGAGTCGGTCTCCACCG
GGTCGCTCGGCCTCGACATCGCGCTGGGCATCGGCGGCCTGCCCAAGGGCCGGATCGTCGAGGTCTATGGTCCGGAAAGC
TCGGGCAAGACCACCCTGGCCCTGCACGTCGTGGCCGAGGTCCAGAAGGCCGGCGGCACCGCCGCCTTCGTCGACGCCGA
GCATGCGCTCGATCCGTCCTACGCCTACAAGCTGGGCGTCAATCTCGATAATCTCCTGGTCTCTCAGCCCGACAACGGCG
AACAGGCCCTGGAGATCACCGACACCCTGGTGCGCTCGGGCGCCGTCGACATCGTGGTCGTCGACTCGGTGGCGGCCCTG
ACGCCCAAGGCCGAAATCGAAGGCGAGATGGGCGACAGCCTGCCGGGTCTTCAGGCCCGTCTGATGAGCCAGGCGCTGCG
CAAGCTGACGGCCTCGATCAACAAGGCCAACACCATCGTCATCTTCATCAACCAGATCCGTCACAAGATCGGGGTGATGT
ACGGCAGCCCCGAAACGACCACGGGCGGCAACGCGCTGAAGTTCTACGCTTCAGTGCGCCTGGATATCCGCCGCACCGGC
TCGGTGAAGGCGCGTGACGAGATCGTCGGCAACAATGTCCGCGTGAAGGTGGTCAAGAACAAGGTGGCCCCGCCGTTCCG
CGAGGTCGAGTTCGACATCATGTACGGCGAGGGCATCTCCAAGCTGGGCGAAGTCATCGACCTAGGCGTCAAAGCCGGGA
TCATCGACAAGGCCGGCTCGTGGTTCTCGTACGGCAGCCAGCGGATCGGCCAGGGCCGCGACAATGTCCGCGAGTTCCTG
AAGAACAACCCGGACGTCGCCGCCGACATCGAAAAGGCTGTCCGCAAGTCGTCGCAGAAGATCGAAGAAGAGCTTCTGGT
CGGCGGCCCGGAAGAGGGCGAAGAGGACTAG

Upstream 100 bases:

>100_bases
AAAGAGTGTACGCCTTTACCAAGTTCCACAGGTTGCTGAGGCGGGGCGCGGGAAGCGTCAATCGGGCGGCCGGAATCATG
GAATAGAAGGCGGATCAACA

Downstream 100 bases:

>100_bases
ATCCAGGCGCTCAAGGCTTTCGCGGCCTTCGCCCGCACTCGCGGGCGTTCCCCGCCTTCAACACGCCCGCGGCGGACCGC
CGCGAAGGCCGCGATCTCAG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTSQAALKLVAKEEGDKQRALEAALAQIDRAFGKGSVMKLGEKGKVEIESVSTGSLGLDIALGIGGLPKGRIVEVYGPES
SGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPDNGEQALEITDTLVRSGAVDIVVVDSVAAL
TPKAEIEGEMGDSLPGLQARLMSQALRKLTASINKANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTG
SVKARDEIVGNNVRVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAGSWFSYGSQRIGQGRDNVREFL
KNNPDVAADIEKAVRKSSQKIEEELLVGGPEEGEED

Sequences:

>Translated_356_residues
MTSQAALKLVAKEEGDKQRALEAALAQIDRAFGKGSVMKLGEKGKVEIESVSTGSLGLDIALGIGGLPKGRIVEVYGPES
SGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPDNGEQALEITDTLVRSGAVDIVVVDSVAAL
TPKAEIEGEMGDSLPGLQARLMSQALRKLTASINKANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTG
SVKARDEIVGNNVRVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAGSWFSYGSQRIGQGRDNVREFL
KNNPDVAADIEKAVRKSSQKIEEELLVGGPEEGEED
>Mature_355_residues
TSQAALKLVAKEEGDKQRALEAALAQIDRAFGKGSVMKLGEKGKVEIESVSTGSLGLDIALGIGGLPKGRIVEVYGPESS
GKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPDNGEQALEITDTLVRSGAVDIVVVDSVAALT
PKAEIEGEMGDSLPGLQARLMSQALRKLTASINKANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGS
VKARDEIVGNNVRVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAGSWFSYGSQRIGQGRDNVREFLK
NNPDVAADIEKAVRKSSQKIEEELLVGGPEEGEED

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=335, Percent_Identity=65.6716417910448, Blast_Score=459, Evalue=1e-130,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_CAUCN (B8H3I7)

Other databases:

- EMBL:   CP001340
- RefSeq:   YP_002516514.1
- ProteinModelPortal:   B8H3I7
- GeneID:   7331512
- GenomeReviews:   CP001340_GR
- KEGG:   ccs:CCNA_01141
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37928; Mature: 37797

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQAALKLVAKEEGDKQRALEAALAQIDRAFGKGSVMKLGEKGKVEIESVSTGSLGLDI
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCEEE
ALGIGGLPKGRIVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHCCCCEEEEEHHHCCCCCCEEEECC
NLDNLLVSQPDNGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQAR
CHHHHEEECCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHH
LMSQALRKLTASINKANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTG
HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHEEEECCCCCCCCCCEEEEEEEEEEEEEECC
SVKARDEIVGNNVRVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAGS
CCCHHHHHCCCCEEEEEEECCCCCCHHHEEEEEEECCCHHHHHHHHHHCHHCCCCCCCCC
WFSYGSQRIGQGRDNVREFLKNNPDVAADIEKAVRKSSQKIEEELLVGGPEEGEED
HHHHCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TSQAALKLVAKEEGDKQRALEAALAQIDRAFGKGSVMKLGEKGKVEIESVSTGSLGLDI
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCEEE
ALGIGGLPKGRIVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHCCCCEEEEEHHHCCCCCCEEEECC
NLDNLLVSQPDNGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQAR
CHHHHEEECCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHH
LMSQALRKLTASINKANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTG
HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHEEEECCCCCCCCCCEEEEEEEEEEEEEECC
SVKARDEIVGNNVRVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAGS
CCCHHHHHCCCCEEEEEEECCCCCCHHHEEEEEEECCCHHHHHHHHHHCHHCCCCCCCCC
WFSYGSQRIGQGRDNVREFLKNNPDVAADIEKAVRKSSQKIEEELLVGGPEEGEED
HHHHCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA