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The map label for this gene is bepC [H]

Identifier: 16125267

GI number: 16125267

Start: 1145175

End: 1146758

Strand: Direct

Name: bepC [H]

Synonym: CC_1015

Alternate gene names: 16125267

Gene position: 1145175-1146758 (Clockwise)

Preceding gene: 16125266

Following gene: 16125269

Centisome position: 28.51

GC content: 65.78

Gene sequence:

>1584_bases
ATGCGAGTGCTGTCGAAAGTTCTGTCCGTGCGAACGTCTCTGATCGCCTTGGCCATGGCCATGGCGGTCGTCGGTCGCGC
TGATCTCGCCCACGCCGAGACCTTGGCCGAGGCGATCACCGCAGCCTATCAGAGCAATCCGAATATTCAGGCCCAACGCG
CCGCCATGCGCGCGCTGGACGAGAACTACACCCAGGCCCGTTCGGCCTATGGGCTGCAAGCCAGCGCCTCGGTCGCTGAG
GTCTATGGCTGGTCCAAGGGCGTCAACGCCAAGAACGGCGTCGAGGCCGCCAGCCAGACCTCGACCCTCTCTCTGAGCCA
GAGCCTCTACACCAACGGTCGTTTCTCGGCCCGCCTGGCGGGTGTCGAGGCGCAGATCAAGGCCGCGCGCGAGAACCTGC
GCCGCATCGAGATGGACCTGCTGGTCCGCGTGACCAACGCCTATATCTCGGTGCGCCGCGACCGCGAGATCCTGCGGATC
AGCCAAGGCGGTGAAGCCTGGCTGCAGAAGCAATTGAAGGACACCGAGGACAAGTACAGCGTCCGTCAGGTGACCTTGAC
CGACGTGCAGCAGGCCAAGGCCCGCCTGGCGTCGGCCAGCACTCAGGTGGCGAACGCCCAGGCGCAGCTGAATGTCAGCG
TAGCGTTCTACGCGTCCCTGGTGGGGCGCCAGCCGGAGACGCTGGAGCCTGAACCCGATATTGACGGCCTGCCTACAACC
CTCGACGAGGCGTTCAATCAGGCCGAACAAGCCAATCCGGTCCTGCTGGCGGCGGGCTACACCGAGAAGGCCTCTCGCGC
CGGCGTCGCCGAGGCGCGGGCCCAGCGCCTGTTCTCGGTCGGCGCGCGCGCGGACTATCGCAATGGCTCCAGCACGCCGT
ACTACGCGCGTGGCGGTCTGCGCGAGGACACCGTCAACGCCTCGATCACCCTGACCCAGCCGCTGTTCACCAGCGGTCAG
CTGAACGCCTCGGTGCGGCAGTCGATCGAGGAGAACAACCGCGACAAGCTGCTGATGGAAGACGCACGTCGCAGCATGGT
CCTGAGCGTCTCGCAGTACTGGGACAGCCTGGTGGCCGCGCGGAAGTCGCTGGTCAGCCTCGAAGAGGAAATGAAGGCCA
ACACGATCGCCTTCTATGGGGTGCGCGAAGAAGAGCGTTTCGCGCTTCGCAGCACGATCGAAGTGCTGAACGCCCAAGCC
GAATTGCAGAACGCCCAGATCAATTTCGTCCGCGGGCGCGCCAACGAGTATGTCGGTCGGCTCCATCTTCTGGCGCAGGT
CGGCACGCTTGAGGTCGGCAATCTCGCTCCCGGCGTCCAGCCCTACGATCCTGAGCGTAACTTCAGGAAGGTCCGGTACC
GCGGCGCTTTGCCGACGGAGCTGATCATCGGAACCTTCGACAAGATCGCCTTGCCGCTCGAGCCCAAGAAGCCGGCGCCG
GGGGACACCTCGCCGATCCGGCCGCCGTCGAGCGAACTGCCGGCCAGGCCTGTTTCGGCCGACAAGGTGACGCCGCCGGC
GTCGATGAACGATCTGCCCGCCCTGACCGACGACACGCCGGTCCAGACCGCGCCCCGCAACTAG

Upstream 100 bases:

>100_bases
AGAATGTCACATGGGAAGAGACGGTCCGCCGTCTTCTTGATTAAGCCACAAACATTGGGTTGAAGACCACGTTAAGACGG
GGTCGGCTACAGTCTAGGAA

Downstream 100 bases:

>100_bases
AGCCCTTTCCGATCGGATCGCCTCAATCCGATCGGATCAAAGGGGTTCTATTTCAGAAGTTTAGAACGTTCTTCGGTCAC
CGTTTCGCACGGATCGGAGA

Product: type I secretion system outer membrane protein RsaF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MRVLSKVLSVRTSLIALAMAMAVVGRADLAHAETLAEAITAAYQSNPNIQAQRAAMRALDENYTQARSAYGLQASASVAE
VYGWSKGVNAKNGVEAASQTSTLSLSQSLYTNGRFSARLAGVEAQIKAARENLRRIEMDLLVRVTNAYISVRRDREILRI
SQGGEAWLQKQLKDTEDKYSVRQVTLTDVQQAKARLASASTQVANAQAQLNVSVAFYASLVGRQPETLEPEPDIDGLPTT
LDEAFNQAEQANPVLLAAGYTEKASRAGVAEARAQRLFSVGARADYRNGSSTPYYARGGLREDTVNASITLTQPLFTSGQ
LNASVRQSIEENNRDKLLMEDARRSMVLSVSQYWDSLVAARKSLVSLEEEMKANTIAFYGVREEERFALRSTIEVLNAQA
ELQNAQINFVRGRANEYVGRLHLLAQVGTLEVGNLAPGVQPYDPERNFRKVRYRGALPTELIIGTFDKIALPLEPKKPAP
GDTSPIRPPSSELPARPVSADKVTPPASMNDLPALTDDTPVQTAPRN

Sequences:

>Translated_527_residues
MRVLSKVLSVRTSLIALAMAMAVVGRADLAHAETLAEAITAAYQSNPNIQAQRAAMRALDENYTQARSAYGLQASASVAE
VYGWSKGVNAKNGVEAASQTSTLSLSQSLYTNGRFSARLAGVEAQIKAARENLRRIEMDLLVRVTNAYISVRRDREILRI
SQGGEAWLQKQLKDTEDKYSVRQVTLTDVQQAKARLASASTQVANAQAQLNVSVAFYASLVGRQPETLEPEPDIDGLPTT
LDEAFNQAEQANPVLLAAGYTEKASRAGVAEARAQRLFSVGARADYRNGSSTPYYARGGLREDTVNASITLTQPLFTSGQ
LNASVRQSIEENNRDKLLMEDARRSMVLSVSQYWDSLVAARKSLVSLEEEMKANTIAFYGVREEERFALRSTIEVLNAQA
ELQNAQINFVRGRANEYVGRLHLLAQVGTLEVGNLAPGVQPYDPERNFRKVRYRGALPTELIIGTFDKIALPLEPKKPAP
GDTSPIRPPSSELPARPVSADKVTPPASMNDLPALTDDTPVQTAPRN
>Mature_527_residues
MRVLSKVLSVRTSLIALAMAMAVVGRADLAHAETLAEAITAAYQSNPNIQAQRAAMRALDENYTQARSAYGLQASASVAE
VYGWSKGVNAKNGVEAASQTSTLSLSQSLYTNGRFSARLAGVEAQIKAARENLRRIEMDLLVRVTNAYISVRRDREILRI
SQGGEAWLQKQLKDTEDKYSVRQVTLTDVQQAKARLASASTQVANAQAQLNVSVAFYASLVGRQPETLEPEPDIDGLPTT
LDEAFNQAEQANPVLLAAGYTEKASRAGVAEARAQRLFSVGARADYRNGSSTPYYARGGLREDTVNASITLTQPLFTSGQ
LNASVRQSIEENNRDKLLMEDARRSMVLSVSQYWDSLVAARKSLVSLEEEMKANTIAFYGVREEERFALRSTIEVLNAQA
ELQNAQINFVRGRANEYVGRLHLLAQVGTLEVGNLAPGVQPYDPERNFRKVRYRGALPTELIIGTFDKIALPLEPKKPAP
GDTSPIRPPSSELPARPVSADKVTPPASMNDLPALTDDTPVQTAPRN

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=427, Percent_Identity=23.4192037470726, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 57477; Mature: 57477

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLSKVLSVRTSLIALAMAMAVVGRADLAHAETLAEAITAAYQSNPNIQAQRAAMRALD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ENYTQARSAYGLQASASVAEVYGWSKGVNAKNGVEAASQTSTLSLSQSLYTNGRFSARLA
HHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHCHHHHHHHHHHHCCCCCEEEEE
GVEAQIKAARENLRRIEMDLLVRVTNAYISVRRDREILRISQGGEAWLQKQLKDTEDKYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHH
VRQVTLTDVQQAKARLASASTQVANAQAQLNVSVAFYASLVGRQPETLEPEPDIDGLPTT
EEEEHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCHH
LDEAFNQAEQANPVLLAAGYTEKASRAGVAEARAQRLFSVGARADYRNGSSTPYYARGGL
HHHHHHHHHHCCCEEEECCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
REDTVNASITLTQPLFTSGQLNASVRQSIEENNRDKLLMEDARRSMVLSVSQYWDSLVAA
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKSLVSLEEEMKANTIAFYGVREEERFALRSTIEVLNAQAELQNAQINFVRGRANEYVGR
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
LHLLAQVGTLEVGNLAPGVQPYDPERNFRKVRYRGALPTELIIGTFDKIALPLEPKKPAP
HHHHHHHCCEEECCCCCCCCCCCCCCCHHHHEECCCCCHHHHHCCHHHEEECCCCCCCCC
GDTSPIRPPSSELPARPVSADKVTPPASMNDLPALTDDTPVQTAPRN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVLSKVLSVRTSLIALAMAMAVVGRADLAHAETLAEAITAAYQSNPNIQAQRAAMRALD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ENYTQARSAYGLQASASVAEVYGWSKGVNAKNGVEAASQTSTLSLSQSLYTNGRFSARLA
HHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHCHHHHHHHHHHHCCCCCEEEEE
GVEAQIKAARENLRRIEMDLLVRVTNAYISVRRDREILRISQGGEAWLQKQLKDTEDKYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHH
VRQVTLTDVQQAKARLASASTQVANAQAQLNVSVAFYASLVGRQPETLEPEPDIDGLPTT
EEEEHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCHH
LDEAFNQAEQANPVLLAAGYTEKASRAGVAEARAQRLFSVGARADYRNGSSTPYYARGGL
HHHHHHHHHHCCCEEEECCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
REDTVNASITLTQPLFTSGQLNASVRQSIEENNRDKLLMEDARRSMVLSVSQYWDSLVAA
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKSLVSLEEEMKANTIAFYGVREEERFALRSTIEVLNAQAELQNAQINFVRGRANEYVGR
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
LHLLAQVGTLEVGNLAPGVQPYDPERNFRKVRYRGALPTELIIGTFDKIALPLEPKKPAP
HHHHHHHCCEEECCCCCCCCCCCCCCCHHHHEECCCCCHHHHHCCHHHEEECCCCCCCCC
GDTSPIRPPSSELPARPVSADKVTPPASMNDLPALTDDTPVQTAPRN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]