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The map label for this gene is phnD [H]

Identifier: 16124617

GI number: 16124617

Start: 383800

End: 384825

Strand: Direct

Name: phnD [H]

Synonym: CC_0362

Alternate gene names: 16124617

Gene position: 383800-384825 (Clockwise)

Preceding gene: 16124616

Following gene: 16124618

Centisome position: 9.55

GC content: 64.81

Gene sequence:

>1026_bases
ATGATCAGCCGTCGTTCGGCTCTCGTGATCGCCGCCGGTCTCTCGGCCTTGGCCTTGGCTTCCTGCTCGGGCAAGTCCGA
CGCGCCGGCGGCCAATAACGAGGTGACCTTCTCCATCCTGTCGACCGAGTCGACGCAGAACATGGAGAGCTACTGGACGC
CGATCCTGAAGGACATGGAGAAGCAGACCGGCCTGAAGGTGAAGCCGTTCTTCTCGTCCAACTACTCGTCGCTGATCGTG
GCCATGGGCGCCAAGCAGACGGACCTTGGCTGGTTCTCCAACCAGTCGGGCCTTGAGGCGGTTCGCCGCTCGAACGGCGA
GGTGTTCGCCCGCACGTTCGATCCGTCGGGCACCGATGGCTACAAGTCGGTGATCATCGTGCCGGCCGACAGCAAGATCC
AGTCGGTCCAGGACCTTCTGAAGTGCGACAAGAGCCTGGATTTCGGCATCGGCGACAAGAAGTCGACCTCCGGCACCCTG
GCGCCGATGACCTATGTGTTCATCCCGGCCAACAAGAAGCCCGAGACGTGCTTCAAGACGGTGATCAGCGCCAACCATCA
GGCGAACCTGTTCGCCGTGGCCAACGGCAAGCTGGACGCCTCGACCAACAACTCCACCGCCATCGGTCTGTCCAAGGCGC
GCGGCGAGGGCGTGACCGACAAGATCCGGGTGATCTGGGAATCGCCGACCCTGCCGGAAGATCCGCTGGTCTGGCGCAAG
GACATCGACCCGGTCGTTAAGGAAAAGCTGCGTCAGTTCTTCCTGACCTACGCCCAGGGCGACACGCCCGAGGCCGAGCA
GCAGCGCGGCTATCTGAAGCGGCTGTCGATCGGCGGCTTCAAGCCGGCCGACGACACCCACCTGCTTGTGGTCCGCGAGA
TGGAAGCCACCGAGCAGCTGGGCCTGGCCCGCGAGGCGGGCGATCAGGCCAAGGTCGCGGCCGCGCAGAAGGTCCTCGAC
GGCGTCAAGGCTGAGCGCCTCGCCGCCGAAGGCAAGGCGGGCGTCGTCGCCCAGCCGGCCAACTGA

Upstream 100 bases:

>100_bases
AGAAGGTCTATGACGGCCCGGCGTCCGAGCTGAAGCGCGAAAAACTCATCGATATCTACGGCCCGGAATTCGAAGACGTG
TTCTGGGAAGGAGCTCCCCA

Downstream 100 bases:

>100_bases
GGTCCTTGATGAGCCAAGCCGCCAAGATTGAAGGGGCGATTCCGCCGCCGCCGAAGCGGTCGGCCTCAGCCCTGGCCTTC
GACACCCTGCTGTGGGGCGG

Product: phosphonates ABC transporter periplasmic phosphonates-binding protein

Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MISRRSALVIAAGLSALALASCSGKSDAPAANNEVTFSILSTESTQNMESYWTPILKDMEKQTGLKVKPFFSSNYSSLIV
AMGAKQTDLGWFSNQSGLEAVRRSNGEVFARTFDPSGTDGYKSVIIVPADSKIQSVQDLLKCDKSLDFGIGDKKSTSGTL
APMTYVFIPANKKPETCFKTVISANHQANLFAVANGKLDASTNNSTAIGLSKARGEGVTDKIRVIWESPTLPEDPLVWRK
DIDPVVKEKLRQFFLTYAQGDTPEAEQQRGYLKRLSIGGFKPADDTHLLVVREMEATEQLGLAREAGDQAKVAAAQKVLD
GVKAERLAAEGKAGVVAQPAN

Sequences:

>Translated_341_residues
MISRRSALVIAAGLSALALASCSGKSDAPAANNEVTFSILSTESTQNMESYWTPILKDMEKQTGLKVKPFFSSNYSSLIV
AMGAKQTDLGWFSNQSGLEAVRRSNGEVFARTFDPSGTDGYKSVIIVPADSKIQSVQDLLKCDKSLDFGIGDKKSTSGTL
APMTYVFIPANKKPETCFKTVISANHQANLFAVANGKLDASTNNSTAIGLSKARGEGVTDKIRVIWESPTLPEDPLVWRK
DIDPVVKEKLRQFFLTYAQGDTPEAEQQRGYLKRLSIGGFKPADDTHLLVVREMEATEQLGLAREAGDQAKVAAAQKVLD
GVKAERLAAEGKAGVVAQPAN
>Mature_341_residues
MISRRSALVIAAGLSALALASCSGKSDAPAANNEVTFSILSTESTQNMESYWTPILKDMEKQTGLKVKPFFSSNYSSLIV
AMGAKQTDLGWFSNQSGLEAVRRSNGEVFARTFDPSGTDGYKSVIIVPADSKIQSVQDLLKCDKSLDFGIGDKKSTSGTL
APMTYVFIPANKKPETCFKTVISANHQANLFAVANGKLDASTNNSTAIGLSKARGEGVTDKIRVIWESPTLPEDPLVWRK
DIDPVVKEKLRQFFLTYAQGDTPEAEQQRGYLKRLSIGGFKPADDTHLLVVREMEATEQLGLAREAGDQAKVAAAQKVLD
GVKAERLAAEGKAGVVAQPAN

Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates [H]

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790543, Length=318, Percent_Identity=38.0503144654088, Blast_Score=219, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017797
- InterPro:   IPR005770 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36696; Mature: 36696

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRRSALVIAAGLSALALASCSGKSDAPAANNEVTFSILSTESTQNMESYWTPILKDME
CCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
KQTGLKVKPFFSSNYSSLIVAMGAKQTDLGWFSNQSGLEAVRRSNGEVFARTFDPSGTDG
HHCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
YKSVIIVPADSKIQSVQDLLKCDKSLDFGIGDKKSTSGTLAPMTYVFIPANKKPETCFKT
CEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHH
VISANHQANLFAVANGKLDASTNNSTAIGLSKARGEGVTDKIRVIWESPTLPEDPLVWRK
HHCCCCCCEEEEEECCEEECCCCCCEEEEEHHHCCCCCCCEEEEEECCCCCCCCCCCCCC
DIDPVVKEKLRQFFLTYAQGDTPEAEQQRGYLKRLSIGGFKPADDTHLLVVREMEATEQL
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHH
GLAREAGDQAKVAAAQKVLDGVKAERLAAEGKAGVVAQPAN
CCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
>Mature Secondary Structure
MISRRSALVIAAGLSALALASCSGKSDAPAANNEVTFSILSTESTQNMESYWTPILKDME
CCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
KQTGLKVKPFFSSNYSSLIVAMGAKQTDLGWFSNQSGLEAVRRSNGEVFARTFDPSGTDG
HHCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
YKSVIIVPADSKIQSVQDLLKCDKSLDFGIGDKKSTSGTLAPMTYVFIPANKKPETCFKT
CEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHH
VISANHQANLFAVANGKLDASTNNSTAIGLSKARGEGVTDKIRVIWESPTLPEDPLVWRK
HHCCCCCCEEEEEECCEEECCCCCCEEEEEHHHCCCCCCCEEEEEECCCCCCCCCCCCCC
DIDPVVKEKLRQFFLTYAQGDTPEAEQQRGYLKRLSIGGFKPADDTHLLVVREMEATEQL
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHH
GLAREAGDQAKVAAAQKVLDGVKAERLAAEGKAGVVAQPAN
CCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]

Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]