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The map label for this gene is xcpQ [H]

Identifier: 16124428

GI number: 16124428

Start: 186287

End: 188350

Strand: Direct

Name: xcpQ [H]

Synonym: CC_0173

Alternate gene names: 16124428

Gene position: 186287-188350 (Clockwise)

Preceding gene: 16124427

Following gene: 16124429

Centisome position: 4.64

GC content: 69.09

Gene sequence:

>2064_bases
ATGACCAAGGTCGCTTCGTCGCGTTCCGTTCTGGCCGCTGTCGCGGCGGCGCTCGTCATGGGCGGGGCGAGCCTCGGGCC
GGCCCCCGTGCTGGCCCAGACCCAGCTACTCAATGTCCAGGACGCGGACATTCGCGTCTTCATCCAGGACGTCGCCAAGT
CGACCGGCACGACCTTCATCATCGATCCCCGCGTCAAGGGCACGGTGACCGTGGCCAGCAACGGGCCGCTGAACCGTCGC
GAGCTGTTCGAGGTGTTCCTCGCCACCCTGCGGGCCAACAACTTCGTGGCCACGCCGGCCGGCAACGGCGCCTACCGCAT
CGAGCCGTCCGAGAACGCGGCCCGTCAGCCTTCGGCGGCCGGCGGGCAGTTCGCCACCGAGGTGTTCCGTCTGCGCACCC
TCGACGCCGCCAGCGCGGTGGAGATGCTCAAGCCGCTGGTCGGGCCGCAGGGTCAGGTCGTGGCCAATCCGCGCGGCGCG
GTCGTGGTGGTGGCTGACTATGCCGACAATGTCCGGCGCATTCGCGGGCTTCTGGCCCAGGTCGACCAGGACCGGGCGAT
GGTCCACACCGTCACCTTGACCCACAGCTCGGCCCGCGAGATCGCCCAAGTCCTCAACGACATGCTCGCAACGCCGGGCG
CCGAGGGCAAGAGCGGCCGTGGCGCGGTCACCGTCGTGCCGGTCGACAGCAGCAATTCGGTTCTGCTGCGGGGCGACTCC
GACGCCGTACAGCGCCTGCTGCCCGTCATCGCCGACCTGGATCGTCGCGCCGAGTCCAGCGACGACGTGCGTGTCGTGTT
CCTGCGTCACGCCAACGCCGAACAGATGCTGCCGGTGCTGCAGCAACTGGTGGGTCAGGCGACCACCTCGGTGACGACCT
CCTCGTCGCGCGGTCTGAGCAACGCGCGGACCGCTACGGGCGCCTCCACGGCGACGACCGCCCCCTCCGCGCCGGTCGCG
GCGACCCCGTCCGCCAACGGGCCCCAGGCCACCATCGCGCGCTTCCCAGGCGCCAACGCTTTGATCATCAATGCGCCGCC
CGAGACCCAACGCACCCTGGCGGAGGTCATTCGCCAGCTGGACGTCCGCCGCGAGCAGGTTCTGGTCGAGGCGATCGTGG
TCGAGGTCACCGACGGCACCGCCAAGCAACTGGGCGTGCAGTTCCTACTGGGCGGGACCAACGGCACCATTCCGTTCGTC
GCGACCAACTACACCAACGCCACGCCCAGCCTGCTGCCGCTGGTTGGGGCTGCGGCCACCACCACCAGCGGCGCCGACAC
CGAGGCGCTGAAATCGTTGCGGGACGCCGCCGTCAGTTCGTTGCTGACCGCCTCGGGCGTGACGTCGGGCGTCGTGGGCC
GCAGCGGCGATGCGCTGTTCGGCGCGATCATCAATGCGGTGAAGAAAGACACGGGCTCGAACCTTCTGTCGACGCCGTCG
ATCATGACGCTCGACAACGAGGAGGCCCGCATCCTGGTCGGCCAGGAAGTGCCGATCACCACGGGCGAAGTGCTGGGCGA
CTCCAACGCCAATCCGTTCCGCACCATCCAGCGCCAGAACGTCGGCATCCAGTTGGAGGTGAAGCCGCAGATCAATGCGG
GCGGCGGCATTACCCTGTTCCTGCGCCAGGAAGTCTCCAGCGTCGCCGGCCCGGTCAGCGTCGGCTCCAGCGAACTGATC
ATCAACAAGCGCGAGATCGAGACCACGGCCCTGGTCGACGACGGTGACATCGTCGTGCTGGGCGGCCTGCTGGATCAGCA
GGAGACCCAGTCGGCCCAGCGCACGCCGGGTCTGGGCGACGTCCCCGGTCTGGGCGCCCTGTTCCGCAGCACGGCGCGCG
AGCGCAAGAAGACCAACCTGATGGTCTTCATCCGTCCTCGCATTATCCGCAGCAGCGCCGACGCCCGGAACCTGACCGCC
CCGCGCTACGACTACATGCGCAATCTGCCGCCCATGACGACGCCGGACGGCGACAACTCGCTCGACGCGGTCATGCGCGA
CTATCTGAACGCGGCGCGTCCGGTCGCCGCGCCGACCGCCGCGAAGCCGGCGACGACGCCATGA

Upstream 100 bases:

>100_bases
AGACCATCGCCGATGGCGTCACCCTGGCCTCGGTCGCCGCCGATCATGTCGAACTGTCCCGTGGCGGCGCACGCGCGACC
CTCTCCTTCCCGGTGTCCCA

Downstream 100 bases:

>100_bases
CCACGCCGATGCTCGCCTACGGTTTCGCCAAGCGAAACGGGGTGGTCCTGCTGTCCCTGGGCGAGCGAGCGGTGATCGGC
GTGCGCGAGGGCTATGACCC

Product: general secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 686

Protein sequence:

>687_residues
MTKVASSRSVLAAVAAALVMGGASLGPAPVLAQTQLLNVQDADIRVFIQDVAKSTGTTFIIDPRVKGTVTVASNGPLNRR
ELFEVFLATLRANNFVATPAGNGAYRIEPSENAARQPSAAGGQFATEVFRLRTLDAASAVEMLKPLVGPQGQVVANPRGA
VVVVADYADNVRRIRGLLAQVDQDRAMVHTVTLTHSSAREIAQVLNDMLATPGAEGKSGRGAVTVVPVDSSNSVLLRGDS
DAVQRLLPVIADLDRRAESSDDVRVVFLRHANAEQMLPVLQQLVGQATTSVTTSSSRGLSNARTATGASTATTAPSAPVA
ATPSANGPQATIARFPGANALIINAPPETQRTLAEVIRQLDVRREQVLVEAIVVEVTDGTAKQLGVQFLLGGTNGTIPFV
ATNYTNATPSLLPLVGAAATTTSGADTEALKSLRDAAVSSLLTASGVTSGVVGRSGDALFGAIINAVKKDTGSNLLSTPS
IMTLDNEEARILVGQEVPITTGEVLGDSNANPFRTIQRQNVGIQLEVKPQINAGGGITLFLRQEVSSVAGPVSVGSSELI
INKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGDVPGLGALFRSTARERKKTNLMVFIRPRIIRSSADARNLTA
PRYDYMRNLPPMTTPDGDNSLDAVMRDYLNAARPVAAPTAAKPATTP

Sequences:

>Translated_687_residues
MTKVASSRSVLAAVAAALVMGGASLGPAPVLAQTQLLNVQDADIRVFIQDVAKSTGTTFIIDPRVKGTVTVASNGPLNRR
ELFEVFLATLRANNFVATPAGNGAYRIEPSENAARQPSAAGGQFATEVFRLRTLDAASAVEMLKPLVGPQGQVVANPRGA
VVVVADYADNVRRIRGLLAQVDQDRAMVHTVTLTHSSAREIAQVLNDMLATPGAEGKSGRGAVTVVPVDSSNSVLLRGDS
DAVQRLLPVIADLDRRAESSDDVRVVFLRHANAEQMLPVLQQLVGQATTSVTTSSSRGLSNARTATGASTATTAPSAPVA
ATPSANGPQATIARFPGANALIINAPPETQRTLAEVIRQLDVRREQVLVEAIVVEVTDGTAKQLGVQFLLGGTNGTIPFV
ATNYTNATPSLLPLVGAAATTTSGADTEALKSLRDAAVSSLLTASGVTSGVVGRSGDALFGAIINAVKKDTGSNLLSTPS
IMTLDNEEARILVGQEVPITTGEVLGDSNANPFRTIQRQNVGIQLEVKPQINAGGGITLFLRQEVSSVAGPVSVGSSELI
INKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGDVPGLGALFRSTARERKKTNLMVFIRPRIIRSSADARNLTA
PRYDYMRNLPPMTTPDGDNSLDAVMRDYLNAARPVAAPTAAKPATTP
>Mature_686_residues
TKVASSRSVLAAVAAALVMGGASLGPAPVLAQTQLLNVQDADIRVFIQDVAKSTGTTFIIDPRVKGTVTVASNGPLNRRE
LFEVFLATLRANNFVATPAGNGAYRIEPSENAARQPSAAGGQFATEVFRLRTLDAASAVEMLKPLVGPQGQVVANPRGAV
VVVADYADNVRRIRGLLAQVDQDRAMVHTVTLTHSSAREIAQVLNDMLATPGAEGKSGRGAVTVVPVDSSNSVLLRGDSD
AVQRLLPVIADLDRRAESSDDVRVVFLRHANAEQMLPVLQQLVGQATTSVTTSSSRGLSNARTATGASTATTAPSAPVAA
TPSANGPQATIARFPGANALIINAPPETQRTLAEVIRQLDVRREQVLVEAIVVEVTDGTAKQLGVQFLLGGTNGTIPFVA
TNYTNATPSLLPLVGAAATTTSGADTEALKSLRDAAVSSLLTASGVTSGVVGRSGDALFGAIINAVKKDTGSNLLSTPSI
MTLDNEEARILVGQEVPITTGEVLGDSNANPFRTIQRQNVGIQLEVKPQINAGGGITLFLRQEVSSVAGPVSVGSSELII
NKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGDVPGLGALFRSTARERKKTNLMVFIRPRIIRSSADARNLTAP
RYDYMRNLPPMTTPDGDNSLDAVMRDYLNAARPVAAPTAAKPATTP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=636, Percent_Identity=31.6037735849057, Blast_Score=261, Evalue=1e-70,
Organism=Escherichia coli, GI1789793, Length=282, Percent_Identity=25.177304964539, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 71704; Mature: 71573

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVASSRSVLAAVAAALVMGGASLGPAPVLAQTQLLNVQDADIRVFIQDVAKSTGTTFI
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHCCCEEE
IDPRVKGTVTVASNGPLNRRELFEVFLATLRANNFVATPAGNGAYRIEPSENAARQPSAA
ECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCCCCCCCC
GGQFATEVFRLRTLDAASAVEMLKPLVGPQGQVVANPRGAVVVVADYADNVRRIRGLLAQ
CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHH
VDQDRAMVHTVTLTHSSAREIAQVLNDMLATPGAEGKSGRGAVTVVPVDSSNSVLLRGDS
HCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEECCH
DAVQRLLPVIADLDRRAESSDDVRVVFLRHANAEQMLPVLQQLVGQATTSVTTSSSRGLS
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCEECCCCCCCC
NARTATGASTATTAPSAPVAATPSANGPQATIARFPGANALIINAPPETQRTLAEVIRQL
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHHHHHHH
DVRREQVLVEAIVVEVTDGTAKQLGVQFLLGGTNGTIPFVATNYTNATPSLLPLVGAAAT
HHHHHHHEEEHEEEEECCCCHHHCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHCCHHC
TTSGADTEALKSLRDAAVSSLLTASGVTSGVVGRSGDALFGAIINAVKKDTGSNLLSTPS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
IMTLDNEEARILVGQEVPITTGEVLGDSNANPFRTIQRQNVGIQLEVKPQINAGGGITLF
EEEECCCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCEEEE
LRQEVSSVAGPVSVGSSELIINKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGD
EEHHHHHHCCCCCCCCCEEEEEHHHCEEEEEECCCCEEEECCCCCCHHHHHHHCCCCCCC
VPGLGALFRSTARERKKTNLMVFIRPRIIRSSADARNLTAPRYDYMRNLPPMTTPDGDNS
CCCHHHHHHHHHHHHHHCCEEEEEECCHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
LDAVMRDYLNAARPVAAPTAAKPATTP
HHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKVASSRSVLAAVAAALVMGGASLGPAPVLAQTQLLNVQDADIRVFIQDVAKSTGTTFI
CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHCCCEEE
IDPRVKGTVTVASNGPLNRRELFEVFLATLRANNFVATPAGNGAYRIEPSENAARQPSAA
ECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCCCCCCCC
GGQFATEVFRLRTLDAASAVEMLKPLVGPQGQVVANPRGAVVVVADYADNVRRIRGLLAQ
CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHH
VDQDRAMVHTVTLTHSSAREIAQVLNDMLATPGAEGKSGRGAVTVVPVDSSNSVLLRGDS
HCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEECCH
DAVQRLLPVIADLDRRAESSDDVRVVFLRHANAEQMLPVLQQLVGQATTSVTTSSSRGLS
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCEECCCCCCCC
NARTATGASTATTAPSAPVAATPSANGPQATIARFPGANALIINAPPETQRTLAEVIRQL
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHHHHHHH
DVRREQVLVEAIVVEVTDGTAKQLGVQFLLGGTNGTIPFVATNYTNATPSLLPLVGAAAT
HHHHHHHEEEHEEEEECCCCHHHCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHCCHHC
TTSGADTEALKSLRDAAVSSLLTASGVTSGVVGRSGDALFGAIINAVKKDTGSNLLSTPS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
IMTLDNEEARILVGQEVPITTGEVLGDSNANPFRTIQRQNVGIQLEVKPQINAGGGITLF
EEEECCCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCEEEE
LRQEVSSVAGPVSVGSSELIINKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGD
EEHHHHHHCCCCCCCCCEEEEEHHHCEEEEEECCCCEEEECCCCCCHHHHHHHCCCCCCC
VPGLGALFRSTARERKKTNLMVFIRPRIIRSSADARNLTAPRYDYMRNLPPMTTPDGDNS
CCCHHHHHHHHHHHHHHCCEEEEEECCHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
LDAVMRDYLNAARPVAAPTAAKPATTP
HHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934833; 10984043 [H]