BacMap

Definition	Caulobacter crescentus CB15 chromosome, complete genome.
Accession	NC_002696
Length	4,016,947

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The map label for this gene is nodG [H]

Identifier: 16124388

GI number: 16124388

Start: 141633

End: 142433

Strand: Direct

Name: nodG [H]

Synonym: CC_0133

Alternate gene names: 16124388

Gene position: 141633-142433 (Clockwise)

Preceding gene: 16124387

Following gene: 16124389

Centisome position: 3.53

GC content: 69.91

Gene sequence:

>801_bases
ATGGCCCGTCGTCTCGCCCTGATCACCGGCGCTTCCGCCGGCATCGGAGCCGCCTCCGCCCGCATCTACGCCAGCCACGG
CTACGACGTGGCCTTGACCGCGCGCCGGGTCGACCGCCTTGAGGGCCTGGCGGCCGAGATCAAGCTGCGCTCGGGCGTCG
AGGCCTACGCGATCCCCGCCGACCTCGCCGAACCGGGCGGTGTCGGCGCCGTCCTCGCGGCGATCGCCGAGCAGGGCCGG
GAGGTCGACGCCCTGATCAACAACGCCGGCTACGGCCTGCCCGGAACCTATGACGCCACCAGCTGGGAGGATCAGGCCAA
GTTCCTGCAGCTGATGCTGACCAGCGTCTGCGAAATGACCCACAAGGTCCTGCCGGGCATGGTCGAGCGCAGGTTCGGCC
GCATCGTCAATGTGGCCTCGCTGGCGGGTCTGGTTCCCGGCGCGGCCGGCCACACCCTCTATGCCGCCACCAAGGGCTTT
CTGGTGAAGTTCTCCCAAAGCCTGCACCTGGAGAACCTGGCCAACGGCGTCCATGTCAGCGCCCTGTGCCCTGGCTTCAC
CTATTCGGAGTTCCACGACGTCAACGGCACCCGCGCCCAGGTCAGCCAGGGCGTGCCCGAGTGGATGTGGCTGGGGGCCG
ACGAGGTCGCCGCCGCCGGTTACGAGGCCGCCGAGGCCAACCGCTCGATCTGCGTGCCCGGCGCGCCCAACAAGGCCATC
GCCGCCATCGCCAAGATCGTCCCCGACGACTGGGCCCTGGCCCTGATGGCCAGCCAGGGAAGCCGGTTCCGGAAGGTGTA
G

Upstream 100 bases:

>100_bases
CTTCAGTAGCGCGCGCGCCGGCTTTGGACGGTTGCTTGAACCAAATCGCGGGCCGTGCTCGTCTCCAGCGAAGTCTCGCC
TTCCACTGGATTCCCATCTC

Downstream 100 bases:

>100_bases
GGCCTAAAAAGCCCGCTCAGCGTGTCATCCCGGCCGCAGCGCGAAGCGCGAAGAGCCGGGACCCAGGGGCGGCGCGCACG
GCGCTTCGTCATCCCCTGGG

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MARRLALITGASAGIGAASARIYASHGYDVALTARRVDRLEGLAAEIKLRSGVEAYAIPADLAEPGGVGAVLAAIAEQGR
EVDALINNAGYGLPGTYDATSWEDQAKFLQLMLTSVCEMTHKVLPGMVERRFGRIVNVASLAGLVPGAAGHTLYAATKGF
LVKFSQSLHLENLANGVHVSALCPGFTYSEFHDVNGTRAQVSQGVPEWMWLGADEVAAAGYEAAEANRSICVPGAPNKAI
AAIAKIVPDDWALALMASQGSRFRKV

Sequences:

>Translated_266_residues
MARRLALITGASAGIGAASARIYASHGYDVALTARRVDRLEGLAAEIKLRSGVEAYAIPADLAEPGGVGAVLAAIAEQGR
EVDALINNAGYGLPGTYDATSWEDQAKFLQLMLTSVCEMTHKVLPGMVERRFGRIVNVASLAGLVPGAAGHTLYAATKGF
LVKFSQSLHLENLANGVHVSALCPGFTYSEFHDVNGTRAQVSQGVPEWMWLGADEVAAAGYEAAEANRSICVPGAPNKAI
AAIAKIVPDDWALALMASQGSRFRKV
>Mature_265_residues
ARRLALITGASAGIGAASARIYASHGYDVALTARRVDRLEGLAAEIKLRSGVEAYAIPADLAEPGGVGAVLAAIAEQGRE
VDALINNAGYGLPGTYDATSWEDQAKFLQLMLTSVCEMTHKVLPGMVERRFGRIVNVASLAGLVPGAAGHTLYAATKGFL
VKFSQSLHLENLANGVHVSALCPGFTYSEFHDVNGTRAQVSQGVPEWMWLGADEVAAAGYEAAEANRSICVPGAPNKAIA
AIAKIVPDDWALALMASQGSRFRKV

Specific function: Proposed to modify Nod factor fatty acyl chain [H]

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705855, Length=193, Percent_Identity=36.2694300518135, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI109715829, Length=211, Percent_Identity=35.5450236966825, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI226371731, Length=185, Percent_Identity=30.8108108108108, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI4557649, Length=182, Percent_Identity=32.967032967033, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI7706318, Length=186, Percent_Identity=34.4086021505376, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI40254992, Length=188, Percent_Identity=29.2553191489362, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI20149619, Length=277, Percent_Identity=25.6317689530686, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI7657478, Length=195, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI210032110, Length=276, Percent_Identity=27.8985507246377, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI31542939, Length=191, Percent_Identity=33.5078534031414, Blast_Score=71, Evalue=9e-13,
Organism=Escherichia coli, GI87082100, Length=186, Percent_Identity=35.4838709677419, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787820, Length=193, Percent_Identity=34.7150259067358, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1787335, Length=218, Percent_Identity=32.1100917431193, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI2367175, Length=222, Percent_Identity=29.7297297297297, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1786701, Length=199, Percent_Identity=30.6532663316583, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790717, Length=191, Percent_Identity=25.6544502617801, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082160, Length=202, Percent_Identity=24.2574257425743, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=217, Percent_Identity=31.3364055299539, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17538480, Length=198, Percent_Identity=31.3131313131313, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71994600, Length=195, Percent_Identity=31.7948717948718, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17538486, Length=201, Percent_Identity=31.8407960199005, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17560150, Length=202, Percent_Identity=32.6732673267327, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=202, Percent_Identity=33.6633663366337, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17562908, Length=202, Percent_Identity=32.6732673267327, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994604, Length=196, Percent_Identity=31.6326530612245, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=199, Percent_Identity=28.643216080402, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=216, Percent_Identity=28.2407407407407, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=206, Percent_Identity=32.0388349514563, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI72000259, Length=205, Percent_Identity=29.2682926829268, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17531453, Length=215, Percent_Identity=31.1627906976744, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=237, Percent_Identity=28.2700421940928, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=215, Percent_Identity=30.2325581395349, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17560220, Length=208, Percent_Identity=32.2115384615385, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=212, Percent_Identity=27.8301886792453, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17508895, Length=253, Percent_Identity=26.8774703557312, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=203, Percent_Identity=32.512315270936, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562910, Length=226, Percent_Identity=27.8761061946903, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=24.031007751938, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=224, Percent_Identity=30.3571428571429, Blast_Score=86, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322861, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640442, Length=210, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24644339, Length=209, Percent_Identity=32.0574162679426, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24584744, Length=202, Percent_Identity=34.1584158415842, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI28574402, Length=202, Percent_Identity=34.1584158415842, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24584748, Length=200, Percent_Identity=34, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI161076933, Length=200, Percent_Identity=34, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=29.0196078431373, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI23397609, Length=192, Percent_Identity=33.8541666666667, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571526, Length=196, Percent_Identity=31.1224489795918, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21358495, Length=193, Percent_Identity=29.0155440414508, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI116007236, Length=224, Percent_Identity=29.9107142857143, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI116007234, Length=197, Percent_Identity=31.4720812182741, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28571387, Length=224, Percent_Identity=29.9107142857143, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007238, Length=161, Percent_Identity=33.5403726708075, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24641232, Length=207, Percent_Identity=28.9855072463768, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007232, Length=141, Percent_Identity=34.7517730496454, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24643142, Length=191, Percent_Identity=29.3193717277487, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24580925, Length=191, Percent_Identity=30.3664921465969, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27892; Mature: 27761

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRLALITGASAGIGAASARIYASHGYDVALTARRVDRLEGLAAEIKLRSGVEAYAIPA
CCCEEEEEECCCCCCCCHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEECCC
DLAEPGGVGAVLAAIAEQGREVDALINNAGYGLPGTYDATSWEDQAKFLQLMLTSVCEMT
CCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HKVLPGMVERRFGRIVNVASLAGLVPGAAGHTLYAATKGFLVKFSQSLHLENLANGVHVS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
ALCPGFTYSEFHDVNGTRAQVSQGVPEWMWLGADEVAAAGYEAAEANRSICVPGAPNKAI
EECCCCCHHHHHCCCCCHHHHHCCCCHHEECCCHHHHHCCCHHHHCCCCEECCCCCCHHH
AAIAKIVPDDWALALMASQGSRFRKV
HHHHHHCCCCHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
ARRLALITGASAGIGAASARIYASHGYDVALTARRVDRLEGLAAEIKLRSGVEAYAIPA
CCEEEEEECCCCCCCCHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEECCC
DLAEPGGVGAVLAAIAEQGREVDALINNAGYGLPGTYDATSWEDQAKFLQLMLTSVCEMT
CCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HKVLPGMVERRFGRIVNVASLAGLVPGAAGHTLYAATKGFLVKFSQSLHLENLANGVHVS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
ALCPGFTYSEFHDVNGTRAQVSQGVPEWMWLGADEVAAAGYEAAEANRSICVPGAPNKAI
EECCCCCHHHHHCCCCCHHHHHCCCCHHEECCCHHHHHCCCHHHHCCCCEECCCCCCHHH
AAIAKIVPDDWALALMASQGSRFRKV
HHHHHHCCCCHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9100384 [H]