| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is ydiA [C]
Identifier: 16124257
GI number: 16124257
Start: 160
End: 1107
Strand: Direct
Name: ydiA [C]
Synonym: CC_0001
Alternate gene names: 16124257
Gene position: 160-1107 (Clockwise)
Preceding gene: NA
Following gene: 16124258
Centisome position: 0.0
GC content: 65.3
Gene sequence:
>948_bases TTGGGGCCGTTCGGCGCCCGGGCGTCCCCAGAGGCAGGGCAAGTGGTTAAGCAACCGTTAACGGATGATCCACAGGAGAG TCTGGCGCAGGGCGAGAGCGAAAGGCTGCCGCCACGCTTCGCCACCTACTTCCATATCCACTTGGTTTCAGACTCCACAG GCGAGACGCTGAACGCGATGGCGCGGGCGGTGTGCGCGCGGTTCACCGACATTCTGCCGATCGAGCACATCTATGCGCTG GTGCGGTCGACCCGGCAGTTGGATCGCGCGTTGGAAGAGATCGCCGGTGCGCCGGGCGTGGTGATGCACACGATCGTTGA CCCTGGCCTCCGCGCAGCCCTCGAGGAAGGCTGCCGCAAGCTGGAAATGCCCTGCATCGCCGCGCTGGATCCGGTGATCA GCGCCATGTCCCGTTATCTGGGCGCGCGGATCTCGACCCGCGTCGGCGCCCAGCACGCCCTGACCAATGACTATTTCGAT CGTATCGAAGCCCTGGACTACGCCATCGCCCACGATGACGGCCAGGGCGGACAGGATCTGACCCAGGCCGACGTCATCCT GGTGGGCGTGTCGCGGACCTCCAAAACCCCGACCTGCATCTATCTGGCGCATCGGGGCGTGCGCGCCGCCAATGTACCGT TGGTCCCAGGCCGCCCGCCGCCCCCTGAGCTGTTCGAGCTGAAGAACACCTTGATCGTCGGCCTGATCACCTCGCCGGAT CGGTTGATCCAGATCCGCCGCAATCGCCTGCTCTCTCTGAAAGAGAACCGCGAGAGCGACTATGTCGACGCCGACGCGGT GCGTCAGGAGATCATCGCTGCGCGCCGCCTGTTCGAGCGCCAGAACTGGCCGGTCATCGACATCACCCGTCGCTCGGTCG AGGAGACGGCGGCGGCGGTGATCAATCTGCTGTCCGGAGGACGGGGCAAGGTCGAGGTCCTGGGATGA
Upstream 100 bases:
>100_bases GGACAATCGGGATTCAGACTTCGGGGGATGCGGCGCAGGCTTGGGGATGATAGGCGAGCAATGCGACCGTTGATCACAGC GGCGCCGTGTCACGACGCTG
Downstream 100 bases:
>100_bases GCCTCACCCCTGTTACGCTCGCGTCCCAGAGCTCGGCGCGTCAGATGATCCTGAAGAACGCCGGTGTCGCCTTCGAGGCC GTCAGCCCCGGGGTCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGPFGARASPEAGQVVKQPLTDDPQESLAQGESERLPPRFATYFHIHLVSDSTGETLNAMARAVCARFTDILPIEHIYAL VRSTRQLDRALEEIAGAPGVVMHTIVDPGLRAALEEGCRKLEMPCIAALDPVISAMSRYLGARISTRVGAQHALTNDYFD RIEALDYAIAHDDGQGGQDLTQADVILVGVSRTSKTPTCIYLAHRGVRAANVPLVPGRPPPPELFELKNTLIVGLITSPD RLIQIRRNRLLSLKENRESDYVDADAVRQEIIAARRLFERQNWPVIDITRRSVEETAAAVINLLSGGRGKVEVLG
Sequences:
>Translated_315_residues MGPFGARASPEAGQVVKQPLTDDPQESLAQGESERLPPRFATYFHIHLVSDSTGETLNAMARAVCARFTDILPIEHIYAL VRSTRQLDRALEEIAGAPGVVMHTIVDPGLRAALEEGCRKLEMPCIAALDPVISAMSRYLGARISTRVGAQHALTNDYFD RIEALDYAIAHDDGQGGQDLTQADVILVGVSRTSKTPTCIYLAHRGVRAANVPLVPGRPPPPELFELKNTLIVGLITSPD RLIQIRRNRLLSLKENRESDYVDADAVRQEIIAARRLFERQNWPVIDITRRSVEETAAAVINLLSGGRGKVEVLG >Mature_314_residues GPFGARASPEAGQVVKQPLTDDPQESLAQGESERLPPRFATYFHIHLVSDSTGETLNAMARAVCARFTDILPIEHIYALV RSTRQLDRALEEIAGAPGVVMHTIVDPGLRAALEEGCRKLEMPCIAALDPVISAMSRYLGARISTRVGAQHALTNDYFDR IEALDYAIAHDDGQGGQDLTQADVILVGVSRTSKTPTCIYLAHRGVRAANVPLVPGRPPPPELFELKNTLIVGLITSPDR LIQIRRNRLLSLKENRESDYVDADAVRQEIIAARRLFERQNWPVIDITRRSVEETAAAVINLLSGGRGKVEVLG
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family
Homologues:
Organism=Escherichia coli, GI1787995, Length=277, Percent_Identity=31.7689530685921, Blast_Score=108, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y001_CAUCR (Q9AC59)
Other databases:
- EMBL: AE005673 - PIR: A87249 - RefSeq: NP_418821.1 - GeneID: 944084 - GenomeReviews: AE005673_GR - KEGG: ccr:CC_0001 - NMPDR: fig|190650.1.peg.1 - TIGR: CC_0001 - HOGENOM: HBG304855 - OMA: AMEFAVM - ProtClustDB: PRK05339 - HAMAP: MF_01062 - InterPro: IPR005177
Pfam domain/function: PF03618 DUF299
EC number: NA
Molecular weight: Translated: 34496; Mature: 34365
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPFGARASPEAGQVVKQPLTDDPQESLAQGESERLPPRFATYFHIHLVSDSTGETLNAM CCCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCHHHHHH ARAVCARFTDILPIEHIYALVRSTRQLDRALEEIAGAPGVVMHTIVDPGLRAALEEGCRK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHHHHH LEMPCIAALDPVISAMSRYLGARISTRVGAQHALTNDYFDRIEALDYAIAHDDGQGGQDL HCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TQADVILVGVSRTSKTPTCIYLAHRGVRAANVPLVPGRPPPPELFELKNTLIVGLITSPD CCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEECCCH RLIQIRRNRLLSLKENRESDYVDADAVRQEIIAARRLFERQNWPVIDITRRSVEETAAAV HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH INLLSGGRGKVEVLG HHHHCCCCCEEEECC >Mature Secondary Structure GPFGARASPEAGQVVKQPLTDDPQESLAQGESERLPPRFATYFHIHLVSDSTGETLNAM CCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCHHHHHH ARAVCARFTDILPIEHIYALVRSTRQLDRALEEIAGAPGVVMHTIVDPGLRAALEEGCRK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHHHHH LEMPCIAALDPVISAMSRYLGARISTRVGAQHALTNDYFDRIEALDYAIAHDDGQGGQDL HCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TQADVILVGVSRTSKTPTCIYLAHRGVRAANVPLVPGRPPPPELFELKNTLIVGLITSPD CCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEECCCH RLIQIRRNRLLSLKENRESDYVDADAVRQEIIAARRLFERQNWPVIDITRRSVEETAAAV HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH INLLSGGRGKVEVLG HHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647