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Identifier: 16120350

GI number: 16120350

Start: 363204

End: 364064

Strand: Direct

Name: Not Available

Synonym: VNG6487H

Alternate gene names: NA

Gene position: 363204-364064 (Clockwise)

Preceding gene: 16120346

Following gene: NA

Centisome position: 99.39

GC content: 51.8

Gene sequence:

>861_bases
ATGCTCGGTGAGGGGATCGATATTGCGGATCTGATGGTTGCAGTGCTTCATCAGCCCCCGAAGTCGTTTGCTTTCACACT
CCAACTAATTGGCCGTGTCACTCGACCTGCGGAAGATTCGGATGTCGCTGCAACAGTTATCGCTGACCCAGACAAGTTGC
GTGAGGCCGGGGTTGATGATGTCGTCAAGCGATTGTATCATGAGGATGCAGGCTGGCGTCAGCTCGTTCCAGAACTCGTC
GACAAATATATTGAGACAAACGTAGCAGCGACTACTGCCGGACAAGATGCGCTTCGAGGCGTCAATGAGCAAGACCTCCA
ACCATACCGCAGCACTCGACTTTACGAGAGTACGGAGTCTGACGTCGACTTGGTAGCTGACGTTTCACTTGACGATGACA
CTATCGTCTACAAACTGCCCCGATCCGACGAGGTGTTTCTTGGGCTGATCACCGAGAAAATCGATAAACCGACCTGGGGG
ACTAGAACTCCGCTTGACTACCGTCAATATGACCTCCATCTCTACTACTATCACGACGAAACCGAGACTCTGTTTGAAGC
TTCCTCATCCGATGAGCTATCTGACCGTATTCGTAGCCAGATAGTATCCGATGAAATTGAAATCTACGGCGGTGAATCAC
TCGTCCGAATGCTGCAGGCAGAGGTCGATATTGAGTACCAAGTTGCAGGACTAGCCAACGCACTGGGGCCGTCTGGGAGT
CTCCCTTCCTATAAAATGTATCTTGGTGACCGGGTGGAGGGAGCTGTGAGGCAAACAGATGCACAGGCCTTCGCTCAAGG
CCATGCAGTTGCAGAGGTTGATGAAGAGATCATCAGTACCTCACAAAGCATCGCCGGCTAA

Upstream 100 bases:

>100_bases
TGATGTTGAGGCGATTCATTCGGACCGGACGTCCAAACAAAATGCAGAGACGATCAGCGCACTTCAAGATGGAGAACTTG
ACGGGGTCGTTGCTGTTGGG

Downstream 100 bases:

>100_bases
TCCGACTTGAGCCATCTGTTCTGTTGTGGTGAGTCGTCGATCACGGTTGAGCAACGCTGATCGAAGGCGGAGCTGTCGCT
GTCGGCGGCGCTCAGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: With A Helicase Domain; Helicase; DEAD/DEAH Box Helicase

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLGEGIDIADLMVAVLHQPPKSFAFTLQLIGRVTRPAEDSDVAATVIADPDKLREAGVDDVVKRLYHEDAGWRQLVPELV
DKYIETNVAATTAGQDALRGVNEQDLQPYRSTRLYESTESDVDLVADVSLDDDTIVYKLPRSDEVFLGLITEKIDKPTWG
TRTPLDYRQYDLHLYYYHDETETLFEASSSDELSDRIRSQIVSDEIEIYGGESLVRMLQAEVDIEYQVAGLANALGPSGS
LPSYKMYLGDRVEGAVRQTDAQAFAQGHAVAEVDEEIISTSQSIAG

Sequences:

>Translated_286_residues
MLGEGIDIADLMVAVLHQPPKSFAFTLQLIGRVTRPAEDSDVAATVIADPDKLREAGVDDVVKRLYHEDAGWRQLVPELV
DKYIETNVAATTAGQDALRGVNEQDLQPYRSTRLYESTESDVDLVADVSLDDDTIVYKLPRSDEVFLGLITEKIDKPTWG
TRTPLDYRQYDLHLYYYHDETETLFEASSSDELSDRIRSQIVSDEIEIYGGESLVRMLQAEVDIEYQVAGLANALGPSGS
LPSYKMYLGDRVEGAVRQTDAQAFAQGHAVAEVDEEIISTSQSIAG
>Mature_286_residues
MLGEGIDIADLMVAVLHQPPKSFAFTLQLIGRVTRPAEDSDVAATVIADPDKLREAGVDDVVKRLYHEDAGWRQLVPELV
DKYIETNVAATTAGQDALRGVNEQDLQPYRSTRLYESTESDVDLVADVSLDDDTIVYKLPRSDEVFLGLITEKIDKPTWG
TRTPLDYRQYDLHLYYYHDETETLFEASSSDELSDRIRSQIVSDEIEIYGGESLVRMLQAEVDIEYQVAGLANALGPSGS
LPSYKMYLGDRVEGAVRQTDAQAFAQGHAVAEVDEEIISTSQSIAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31694; Mature: 31694

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGEGIDIADLMVAVLHQPPKSFAFTLQLIGRVTRPAEDSDVAATVIADPDKLREAGVDD
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHCCHHH
VVKRLYHEDAGWRQLVPELVDKYIETNVAATTAGQDALRGVNEQDLQPYRSTRLYESTES
HHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHCCCCHHHCCHHHHHHHHCCCCC
DVDLVADVSLDDDTIVYKLPRSDEVFLGLITEKIDKPTWGTRTPLDYRQYDLHLYYYHDE
CCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECC
TETLFEASSSDELSDRIRSQIVSDEIEIYGGESLVRMLQAEVDIEYQVAGLANALGPSGS
HHHHHHCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCEEEHHHHHHHCCCCCC
LPSYKMYLGDRVEGAVRQTDAQAFAQGHAVAEVDEEIISTSQSIAG
CCCEEEHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGEGIDIADLMVAVLHQPPKSFAFTLQLIGRVTRPAEDSDVAATVIADPDKLREAGVDD
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHCCHHH
VVKRLYHEDAGWRQLVPELVDKYIETNVAATTAGQDALRGVNEQDLQPYRSTRLYESTES
HHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHCCCCHHHCCHHHHHHHHCCCCC
DVDLVADVSLDDDTIVYKLPRSDEVFLGLITEKIDKPTWGTRTPLDYRQYDLHLYYYHDE
CCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECC
TETLFEASSSDELSDRIRSQIVSDEIEIYGGESLVRMLQAEVDIEYQVAGLANALGPSGS
HHHHHHCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCEEEHHHHHHHCCCCCC
LPSYKMYLGDRVEGAVRQTDAQAFAQGHAVAEVDEEIISTSQSIAG
CCCEEEHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA