Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16120348

GI number: 16120348

Start: 360624

End: 361460

Strand: Reverse

Name: Not Available

Synonym: VNG6484H

Alternate gene names: NA

Gene position: 361460-360624 (Counterclockwise)

Preceding gene: 16120349

Following gene: 16120347

Centisome position: 98.91

GC content: 58.3

Gene sequence:

>837_bases
ATGGCTGACTGCGACGACCTCTCTTACGCGGCGTTCCACGACTGGTTCGAACCGGGGTTCGTTGCACTCCTTCGAGAGAT
TCTCGATGATGCTATCGAGAATCTCGATACTGGACGAGCCGACTTGAGCGGACGTCTCGAACGCTTTCGAGACGTCCTCA
TTGCTGACGCGACTATTGTTTCGCTGTATCAAGACGCCGCTGATGTCTACGCCGCAACCGGCGAAGACCAGGCTGAACTG
AAACTCCACCTCATCGAGTCACTCTCGACAGGTCTTCCAACACGGTTCCGCACAACCGACGGCACGACTCACGAACGGAG
TCAGCTACCCACCGGAGAGTGGGTAGCTGACGCCCTCATCCTGCTTGATTTGGGCTTCTACGATTTCTGGTTGTTCGATC
GTATCGACCAGAACGGCGGCTGGTTCGTCTCCCGCGTCAAGGACAACGCGAACTTCGAGATTGTCGAAGAACTGCGGACT
TGGCGAGGCAACAGCATTCCGCTGGAAGGAGAGTCGCTGCAGGCCGTCCTCGACGACCTGCAGCGACAGGAGATCGACGT
CCGCATCACGCTTTCATTCGAGCGCAAACGAGGGTCGGGCGCCAGCGCGACCCGGACGTTTCGACTGGTCGGCCTGCGCA
ACGAGGAGACCGAAGAGTACCATCTGTATCTGACGAATCTCGGCAACGACGACTACAGCGCGCCCGATATCGCGCAGCTC
TATCGGGCGCGCTGGGAGGTCGAACTGCTGTTCAAGGGAGGGTGTCATAGAACGAGTAGCACACCAAAGAGCAGGGTGAA
TGCTGAGGTGGATGAGTCCAGCGACCCTGCAGGATGA

Upstream 100 bases:

>100_bases
GCGGAAGTTCGACATCGTTGCGCTGTTTTACACACTCTCGTTTGGCTTCGCTGCTGGCTCAGACCGCTCTCTGCAAGCAT
TTCTCGAACGCTATGTCGAG

Downstream 100 bases:

>100_bases
TCCTTCGGTAGACTCGTTCTTCAATGTCGTGGAGACCGAGACGCTAGCGCTGTTCGAGCACCTCTCCTTCGAGTTTCTCG
AAGAGTTCGACGTGTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISH8-Type Transposase; IS Element Transposase; Transposase Is4 Family

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MADCDDLSYAAFHDWFEPGFVALLREILDDAIENLDTGRADLSGRLERFRDVLIADATIVSLYQDAADVYAATGEDQAEL
KLHLIESLSTGLPTRFRTTDGTTHERSQLPTGEWVADALILLDLGFYDFWLFDRIDQNGGWFVSRVKDNANFEIVEELRT
WRGNSIPLEGESLQAVLDDLQRQEIDVRITLSFERKRGSGASATRTFRLVGLRNEETEEYHLYLTNLGNDDYSAPDIAQL
YRARWEVELLFKGGCHRTSSTPKSRVNAEVDESSDPAG

Sequences:

>Translated_278_residues
MADCDDLSYAAFHDWFEPGFVALLREILDDAIENLDTGRADLSGRLERFRDVLIADATIVSLYQDAADVYAATGEDQAEL
KLHLIESLSTGLPTRFRTTDGTTHERSQLPTGEWVADALILLDLGFYDFWLFDRIDQNGGWFVSRVKDNANFEIVEELRT
WRGNSIPLEGESLQAVLDDLQRQEIDVRITLSFERKRGSGASATRTFRLVGLRNEETEEYHLYLTNLGNDDYSAPDIAQL
YRARWEVELLFKGGCHRTSSTPKSRVNAEVDESSDPAG
>Mature_277_residues
ADCDDLSYAAFHDWFEPGFVALLREILDDAIENLDTGRADLSGRLERFRDVLIADATIVSLYQDAADVYAATGEDQAELK
LHLIESLSTGLPTRFRTTDGTTHERSQLPTGEWVADALILLDLGFYDFWLFDRIDQNGGWFVSRVKDNANFEIVEELRTW
RGNSIPLEGESLQAVLDDLQRQEIDVRITLSFERKRGSGASATRTFRLVGLRNEETEEYHLYLTNLGNDDYSAPDIAQLY
RARWEVELLFKGGCHRTSSTPKSRVNAEVDESSDPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31434; Mature: 31303

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADCDDLSYAAFHDWFEPGFVALLREILDDAIENLDTGRADLSGRLERFRDVLIADATIV
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SLYQDAADVYAATGEDQAELKLHLIESLSTGLPTRFRTTDGTTHERSQLPTGEWVADALI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCCHHHHHHHH
LLDLGFYDFWLFDRIDQNGGWFVSRVKDNANFEIVEELRTWRGNSIPLEGESLQAVLDDL
HHHHCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
QRQEIDVRITLSFERKRGSGASATRTFRLVGLRNEETEEYHLYLTNLGNDDYSAPDIAQL
HHCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHH
YRARWEVELLFKGGCHRTSSTPKSRVNAEVDESSDPAG
HHHHCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ADCDDLSYAAFHDWFEPGFVALLREILDDAIENLDTGRADLSGRLERFRDVLIADATIV
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SLYQDAADVYAATGEDQAELKLHLIESLSTGLPTRFRTTDGTTHERSQLPTGEWVADALI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCCHHHHHHHH
LLDLGFYDFWLFDRIDQNGGWFVSRVKDNANFEIVEELRTWRGNSIPLEGESLQAVLDDL
HHHHCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
QRQEIDVRITLSFERKRGSGASATRTFRLVGLRNEETEEYHLYLTNLGNDDYSAPDIAQL
HHCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHH
YRARWEVELLFKGGCHRTSSTPKSRVNAEVDESSDPAG
HHHHCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA