Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120337

GI number: 16120337

Start: 352084

End: 352656

Strand: Direct

Name: Not Available

Synonym: VNG6469C

Alternate gene names: 16120337

Gene position: 352084-352656 (Clockwise)

Preceding gene: 16120336

Following gene: 16120340

Centisome position: 96.35

GC content: 62.13

Gene sequence:

>573_bases
ATGAGCACGGACACACCCGACGCGTCCGTCGATGACGCGCCCTCGCGTGCAGAGCTCGCCGCGCGCGTCAACGAACTCGA
GGACGCACTCGCCGAAGCCACCAGCGAAGACGACGCCAAGAAGATGAGCATCATCTCGACAAAGGGCACGCTCGACATGG
CGTACCCGCCGCTCATCCTCGCCAGCACCGCGGCCGCGTTCGGCTACGAGGTGACCGTCTTTCACACGTTCTGGGGGCTG
GAAATCCTCCACGAGGAACGTTCGAAGAACCTCAAACTCAGTTCCGTCGGCAACCCCAACATGCCCGTTCCGAACGCCGT
CGCAGCGCTCCCCGGCATGGACCGCGTGACGACGAAGATGATGGAGAAGAAAATCGACGACAACGACACCGCCACCATCG
AGGAACTCATCGAGACGAGCCTCGACATGGGCGTCGAGTTTCAGGCATGTCAGATGACCATCGATCTGATGGACTACGAC
GAGGACGACTTCTACGACGGCGTCACCACCGGCGTCGGCGCCGCAACAGCCCTCCAAGACATGGCCGAGGCCGACATCCA
GCTCCTTGTCTGA

Upstream 100 bases:

>100_bases
ACATCGACGGCTGGGCGTCCGGCACCGCGGGCGTCGAGCTCGTCGACCAGGAGGAAGGCGACGACGTGTACAAGCACTAC
GTCCGCAAGACGAAGTAACG

Downstream 100 bases:

>100_bases
ACTCCGATGCACAAACCCGGGAGCCCGATTCCCAGCTTTCCAGTGCCTTAGGCGGGCAGAAACCACCGAAGCGGTCGACC
TGCTCGTGTTGTCCAGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSTDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLILASTAAAFGYEVTVFHTFWGL
EILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKMMEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYD
EDDFYDGVTTGVGAATALQDMAEADIQLLV

Sequences:

>Translated_190_residues
MSTDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLILASTAAAFGYEVTVFHTFWGL
EILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKMMEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYD
EDDFYDGVTTGVGAATALQDMAEADIQLLV
>Mature_189_residues
STDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLILASTAAAFGYEVTVFHTFWGLE
ILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKMMEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYDE
DDFYDGVTTGVGAATALQDMAEADIQLLV

Specific function: Unknown

COG id: COG2210

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 20548; Mature: 20417

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLIL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEECCCCCHHH
ASTAAAFGYEVTVFHTFWGLEILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKM
HHHHHHHCEEEEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHCCCCHHHHHHH
MEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYDEDDFYDGVTTGVGAATALQD
HHHHCCCCCHHHHHHHHHHHHHCCCCEEEHEEEEEECCCCCCHHHCCHHHHHHHHHHHHH
MAEADIQLLV
HHHHHHEECC
>Mature Secondary Structure 
STDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEECCCCCHHH
ASTAAAFGYEVTVFHTFWGLEILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKM
HHHHHHHCEEEEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHCCCCHHHHHHH
MEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYDEDDFYDGVTTGVGAATALQD
HHHHCCCCCHHHHHHHHHHHHHCCCCEEEHEEEEEECCCCCCHHHCCHHHHHHHHHHHHH
MAEADIQLLV
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]