| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120337
GI number: 16120337
Start: 352084
End: 352656
Strand: Direct
Name: Not Available
Synonym: VNG6469C
Alternate gene names: 16120337
Gene position: 352084-352656 (Clockwise)
Preceding gene: 16120336
Following gene: 16120340
Centisome position: 96.35
GC content: 62.13
Gene sequence:
>573_bases ATGAGCACGGACACACCCGACGCGTCCGTCGATGACGCGCCCTCGCGTGCAGAGCTCGCCGCGCGCGTCAACGAACTCGA GGACGCACTCGCCGAAGCCACCAGCGAAGACGACGCCAAGAAGATGAGCATCATCTCGACAAAGGGCACGCTCGACATGG CGTACCCGCCGCTCATCCTCGCCAGCACCGCGGCCGCGTTCGGCTACGAGGTGACCGTCTTTCACACGTTCTGGGGGCTG GAAATCCTCCACGAGGAACGTTCGAAGAACCTCAAACTCAGTTCCGTCGGCAACCCCAACATGCCCGTTCCGAACGCCGT CGCAGCGCTCCCCGGCATGGACCGCGTGACGACGAAGATGATGGAGAAGAAAATCGACGACAACGACACCGCCACCATCG AGGAACTCATCGAGACGAGCCTCGACATGGGCGTCGAGTTTCAGGCATGTCAGATGACCATCGATCTGATGGACTACGAC GAGGACGACTTCTACGACGGCGTCACCACCGGCGTCGGCGCCGCAACAGCCCTCCAAGACATGGCCGAGGCCGACATCCA GCTCCTTGTCTGA
Upstream 100 bases:
>100_bases ACATCGACGGCTGGGCGTCCGGCACCGCGGGCGTCGAGCTCGTCGACCAGGAGGAAGGCGACGACGTGTACAAGCACTAC GTCCGCAAGACGAAGTAACG
Downstream 100 bases:
>100_bases ACTCCGATGCACAAACCCGGGAGCCCGATTCCCAGCTTTCCAGTGCCTTAGGCGGGCAGAAACCACCGAAGCGGTCGACC TGCTCGTGTTGTCCAGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSTDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLILASTAAAFGYEVTVFHTFWGL EILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKMMEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYD EDDFYDGVTTGVGAATALQDMAEADIQLLV
Sequences:
>Translated_190_residues MSTDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLILASTAAAFGYEVTVFHTFWGL EILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKMMEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYD EDDFYDGVTTGVGAATALQDMAEADIQLLV >Mature_189_residues STDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLILASTAAAFGYEVTVFHTFWGLE ILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKMMEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYDE DDFYDGVTTGVGAATALQDMAEADIQLLV
Specific function: Unknown
COG id: COG2210
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 20548; Mature: 20417
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLIL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEECCCCCHHH ASTAAAFGYEVTVFHTFWGLEILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKM HHHHHHHCEEEEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHCCCCHHHHHHH MEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYDEDDFYDGVTTGVGAATALQD HHHHCCCCCHHHHHHHHHHHHHCCCCEEEHEEEEEECCCCCCHHHCCHHHHHHHHHHHHH MAEADIQLLV HHHHHHEECC >Mature Secondary Structure STDTPDASVDDAPSRAELAARVNELEDALAEATSEDDAKKMSIISTKGTLDMAYPPLIL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEECCCCCHHH ASTAAAFGYEVTVFHTFWGLEILHEERSKNLKLSSVGNPNMPVPNAVAALPGMDRVTTKM HHHHHHHCEEEEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHCCCCHHHHHHH MEKKIDDNDTATIEELIETSLDMGVEFQACQMTIDLMDYDEDDFYDGVTTGVGAATALQD HHHHCCCCCHHHHHHHHHHHHHCCCCEEEHEEEEEECCCCCCHHHCCHHHHHHHHHHHHH MAEADIQLLV HHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]