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Identifier: 16120326

GI number: 16120326

Start: 343146

End: 343550

Strand: Reverse

Name: Not Available

Synonym: VNG6454C

Alternate gene names: NA

Gene position: 343550-343146 (Counterclockwise)

Preceding gene: 16120327

Following gene: 16120325

Centisome position: 94.01

GC content: 58.02

Gene sequence:

>405_bases
ATGCCAGATTCGATGTCCGAACAACTCCGTCAGGATATGGAGTGTGAGGGGCTGCTGGAGTGTTTCCACGGTCTCAAAGA
ACTCGACAAAGAGTGCTTCCAAGCGCTCGTCGAGGCCGAGGAACCGATGACCGTCGACGAACTCGCAGAGGCCGTCGACC
GGGAGCGCTCGACGGCCTACCGAGCCGTTCAGCGCCTCCTCCAGACGGGATTCATCGAGAAAGAGCAGGTCAACTACGAG
CAGGGCGGCTACTACCACGTCTACTCGCCAAGCGATCCGTCTCAGATTACGGATGACATGCAGCGGATGCTCAACGACTG
GTACGCGAAGATGGGCCAGCTCATCCAGGAGTTCGAGACGAAGTACGAACAGCCCGATAGCGTACCCCAATCTGCCGAAA
GCTAA

Upstream 100 bases:

>100_bases
GGGAGCGTCTAACCCTGTTTCTCGGGCCGCTATAGCGCACAATTGTGCAATCCATACAAAAATCTTATAACTGCACAGCC
CCTACGATTGAGTGATACTA

Downstream 100 bases:

>100_bases
CGTTTCTTCTCCTGACGGCGCGTATCTCTGCGTTCCTACGGATTTAGCTGGTCGGCTGATTTTCCCTGGTACTCATAGCG
GCGAGCGGTTACGGTGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MPDSMSEQLRQDMECEGLLECFHGLKELDKECFQALVEAEEPMTVDELAEAVDRERSTAYRAVQRLLQTGFIEKEQVNYE
QGGYYHVYSPSDPSQITDDMQRMLNDWYAKMGQLIQEFETKYEQPDSVPQSAES

Sequences:

>Translated_134_residues
MPDSMSEQLRQDMECEGLLECFHGLKELDKECFQALVEAEEPMTVDELAEAVDRERSTAYRAVQRLLQTGFIEKEQVNYE
QGGYYHVYSPSDPSQITDDMQRMLNDWYAKMGQLIQEFETKYEQPDSVPQSAES
>Mature_133_residues
PDSMSEQLRQDMECEGLLECFHGLKELDKECFQALVEAEEPMTVDELAEAVDRERSTAYRAVQRLLQTGFIEKEQVNYEQ
GGYYHVYSPSDPSQITDDMQRMLNDWYAKMGQLIQEFETKYEQPDSVPQSAES

Specific function: Unknown

COG id: COG3355

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 15574; Mature: 15443

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSMSEQLRQDMECEGLLECFHGLKELDKECFQALVEAEEPMTVDELAEAVDRERSTAY
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RAVQRLLQTGFIEKEQVNYEQGGYYHVYSPSDPSQITDDMQRMLNDWYAKMGQLIQEFET
HHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYEQPDSVPQSAES
HHCCCCCCCCCCCC
>Mature Secondary Structure 
PDSMSEQLRQDMECEGLLECFHGLKELDKECFQALVEAEEPMTVDELAEAVDRERSTAY
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RAVQRLLQTGFIEKEQVNYEQGGYYHVYSPSDPSQITDDMQRMLNDWYAKMGQLIQEFET
HHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYEQPDSVPQSAES
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]