Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16120307

GI number: 16120307

Start: 327699

End: 327929

Strand: Reverse

Name: Not Available

Synonym: VNG6431H

Alternate gene names: NA

Gene position: 327929-327699 (Counterclockwise)

Preceding gene: 16120312

Following gene: 16120305

Centisome position: 89.74

GC content: 54.98

Gene sequence:

>231_bases
ATGACACACCTCTTTTCCCGAGAGGTACCAGTGTTCTCTGTCGTCGTCGGTAGCGGAGACCTTGTTTCCTCGGTCTACCG
AACATGGGACACACCTATTTTCCTGAGTGACGGTGAGCGAACTGACGTCGAGAACCAGCAGCCTACACGATCTTCAGCAG
TTTCAAGACGGAGCGTCCGGCCTCAAGGAACGAGTGGTTCCGACACTGAGTCGGAAGGACGACGTGAGTAG

Upstream 100 bases:

>100_bases
AAAGAAACCGCGCTAGCAACTACTGTTACCAAGATAAAGACGGTCGCGAATAAGCTCAACCAGCCCCCAACACAGGACCT
CCCCGTAGGGGTCGGCGGAG

Downstream 100 bases:

>100_bases
GCCGGAGAACAAGCCGACACAAGGGAAACAAACAACGCCGGGTGATGCTAACTGACTCGCTCTCGAAATGCTTTTTCGCG
GGCCTATCGGTAGTGTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MTHLFSREVPVFSVVVGSGDLVSSVYRTWDTPIFLSDGERTDVENQQPTRSSAVSRRSVRPQGTSGSDTESEGRRE

Sequences:

>Translated_76_residues
MTHLFSREVPVFSVVVGSGDLVSSVYRTWDTPIFLSDGERTDVENQQPTRSSAVSRRSVRPQGTSGSDTESEGRRE
>Mature_75_residues
THLFSREVPVFSVVVGSGDLVSSVYRTWDTPIFLSDGERTDVENQQPTRSSAVSRRSVRPQGTSGSDTESEGRRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8417; Mature: 8286

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLFSREVPVFSVVVGSGDLVSSVYRTWDTPIFLSDGERTDVENQQPTRSSAVSRRSVR
CCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCC
PQGTSGSDTESEGRRE
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
THLFSREVPVFSVVVGSGDLVSSVYRTWDTPIFLSDGERTDVENQQPTRSSAVSRRSVR
CCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCC
PQGTSGSDTESEGRRE
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA